RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 DNAJC5Q9H3Z4 198 aa5.86□□□□□ -1.47
TMEM38B-201ENST00000374688 SPDYE2BA6NHP3 402 aa5.85□□□□□ -1.47
TMEM38B-201ENST00000374688 SPDYE6P0CI01 402 aa5.85□□□□□ -1.47
TMEM38B-201ENST00000374688 UBTFP17480 764 aaKnown RBP5.85□□□□□ -1.47
TMEM38B-201ENST00000374688 NEUROD1Q13562 356 aa5.85□□□□□ -1.47
TMEM38B-201ENST00000374688 SPDYE2Q495Y8 402 aa5.85□□□□□ -1.47
TMEM38B-201ENST00000374688 FBLN2P98095 1184 aa5.85□□□□□ -1.47
TMEM38B-201ENST00000374688 ZEB1P37275 1124 aaPredicted RBP5.83□□□□□ -1.48
TMEM38B-201ENST00000374688 CCDC136Q96JN2 1154 aa5.82□□□□□ -1.48
TMEM38B-201ENST00000374688 HSP90B1P14625 803 aaKnown RBP5.81□□□□□ -1.48
TMEM38B-201ENST00000374688 STAG3Q9UJ98 1225 aa5.81□□□□□ -1.48
TMEM38B-201ENST00000374688 FGD1P98174 961 aa5.81□□□□□ -1.48
TMEM38B-201ENST00000374688 ZNF326Q5BKZ1 582 aaKnown RBP5.8□□□□□ -1.48
TMEM38B-201ENST00000374688 HMGB1P09429 215 aaKnown RBP5.8□□□□□ -1.48
TMEM38B-201ENST00000374688 A0A0U1RQG5 324 aaPredicted RBP5.79□□□□□ -1.48
TMEM38B-201ENST00000374688 SPDYE4A6NLX3 237 aa5.79□□□□□ -1.48
TMEM38B-201ENST00000374688 DCAF8L1A6NGE4 600 aa5.78□□□□□ -1.48
TMEM38B-201ENST00000374688 POLA2Q14181 598 aa5.78□□□□□ -1.48
TMEM38B-201ENST00000374688 CLSPNQ9HAW4 1339 aa5.76□□□□□ -1.49
TMEM38B-201ENST00000374688 CFAP44Q96MT7 982 aa5.76□□□□□ -1.49
TMEM38B-201ENST00000374688 SHROOM4Q9ULL8 1493 aa5.75□□□□□ -1.49
TMEM38B-201ENST00000374688 FKBP8Q14318 412 aa5.74□□□□□ -1.49
TMEM38B-201ENST00000374688 GLIPR1L2Q4G1C9 344 aa5.74□□□□□ -1.49
TMEM38B-201ENST00000374688 VSIG10Q8N0Z9 540 aa5.74□□□□□ -1.49
TMEM38B-201ENST00000374688 NAP1L5Q96NT1 182 aaPredicted RBP5.74□□□□□ -1.49
TMEM38B-201ENST00000374688 PAXIP1Q6ZW49 1069 aaPredicted RBP5.74□□□□□ -1.49
TMEM38B-201ENST00000374688 AKT1S1Q96B36 256 aa5.73□□□□□ -1.49
TMEM38B-201ENST00000374688 CCDC9Q9Y3X0 531 aaKnown RBP5.72□□□□□ -1.49
TMEM38B-201ENST00000374688 IGSF3O75054 1194 aa5.72□□□□□ -1.49
TMEM38B-201ENST00000374688 SGIP1Q9BQI5 828 aa5.71□□□□□ -1.49
TMEM38B-201ENST00000374688 IRX6P78412 446 aaPredicted RBP5.71□□□□□ -1.5
TMEM38B-201ENST00000374688 BCCIPQ9P287 314 aaKnown RBP eCLIP5.7□□□□□ -1.5
TMEM38B-201ENST00000374688 CHRM1P11229 460 aaPredicted RBP5.7□□□□□ -1.5
TMEM38B-201ENST00000374688 SALL2Q9Y467 1007 aaPredicted RBP5.69□□□□□ -1.5
TMEM38B-201ENST00000374688 ERICH6BQ5W0A0 696 aa5.67□□□□□ -1.5
TMEM38B-201ENST00000374688 KDM2AQ9Y2K7 1162 aa5.67□□□□□ -1.5
TMEM38B-201ENST00000374688 ARID3AQ99856 593 aa5.67□□□□□ -1.5
TMEM38B-201ENST00000374688 CAPN15O75808 1086 aa5.67□□□□□ -1.5
TMEM38B-201ENST00000374688 AAMPQ13685 434 aa5.67□□□□□ -1.5
TMEM38B-201ENST00000374688 MYT1LQ9UL68 1186 aa5.66□□□□□ -1.5
TMEM38B-201ENST00000374688 RSPH4AQ5TD94 716 aa5.66□□□□□ -1.5
TMEM38B-201ENST00000374688 TRIM41Q8WV44 630 aa5.65□□□□□ -1.5
TMEM38B-201ENST00000374688 MNX1P50219 401 aaPredicted RBP5.65□□□□□ -1.5
TMEM38B-201ENST00000374688 VASPP50552 380 aaPredicted RBP5.65□□□□□ -1.51
TMEM38B-201ENST00000374688 RBM42Q9BTD8 480 aaKnown RBP5.65□□□□□ -1.51
TMEM38B-201ENST00000374688 DEKP35659 375 aaKnown RBP5.64□□□□□ -1.51
TMEM38B-201ENST00000374688 RBM10P98175 930 aaKnown RBP5.64□□□□□ -1.51
TMEM38B-201ENST00000374688 RSPH6AQ9H0K4 717 aa5.62□□□□□ -1.51
TMEM38B-201ENST00000374688 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.61□□□□□ -1.51
TMEM38B-201ENST00000374688 IFNLR1Q8IU57 520 aaPredicted RBP5.61□□□□□ -1.51
TMEM38B-201ENST00000374688 ZBTB7CA1YPR0 619 aa5.6□□□□□ -1.51
TMEM38B-201ENST00000374688 TRHP20396 242 aaPredicted RBP5.6□□□□□ -1.51
TMEM38B-201ENST00000374688 NBR1Q14596 966 aa5.6□□□□□ -1.51
TMEM38B-201ENST00000374688 PUS7Q96PZ0 661 aaKnown RBP5.6□□□□□ -1.51
TMEM38B-201ENST00000374688 TSHZ2Q9NRE2 1034 aa5.6□□□□□ -1.51
TMEM38B-201ENST00000374688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.59□□□□□ -1.51
TMEM38B-201ENST00000374688 NCLP19338 710 aaKnown RBP5.59□□□□□ -1.51
TMEM38B-201ENST00000374688 ZNF592Q92610 1267 aa5.59□□□□□ -1.51
TMEM38B-201ENST00000374688 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.59□□□□□ -1.51
TMEM38B-201ENST00000374688 CACNB1Q02641 598 aaPredicted RBP5.57□□□□□ -1.52
TMEM38B-201ENST00000374688 ZNF526Q8TF50 670 aaPredicted RBP5.57□□□□□ -1.52
TMEM38B-201ENST00000374688 PSMD1Q99460 953 aa5.57□□□□□ -1.52
TMEM38B-201ENST00000374688 TICAM2Q86XR7 235 aa5.57□□□□□ -1.52
TMEM38B-201ENST00000374688 YTHDC1Q96MU7 727 aaKnown RBP5.57□□□□□ -1.52
TMEM38B-201ENST00000374688 ARID4BQ4LE39 1312 aaPredicted RBP5.56□□□□□ -1.52
TMEM38B-201ENST00000374688 ZMYND15Q9H091 742 aa5.56□□□□□ -1.52
TMEM38B-201ENST00000374688 CREBZFQ9NS37 354 aa5.56□□□□□ -1.52
TMEM38B-201ENST00000374688 BRPF3Q9ULD4 1205 aa5.56□□□□□ -1.52
TMEM38B-201ENST00000374688 CLSTN1O94985 981 aa5.56□□□□□ -1.52
TMEM38B-201ENST00000374688 FXR2P51116 673 aaKnown RBP eCLIP5.56□□□□□ -1.52
TMEM38B-201ENST00000374688 DIEXFQ68CQ4 756 aaKnown RBP5.56□□□□□ -1.52
TMEM38B-201ENST00000374688 NUBP1P53384 320 aa5.55□□□□□ -1.52
TMEM38B-201ENST00000374688 PKD2Q13563 968 aa5.55□□□□□ -1.52
TMEM38B-201ENST00000374688 ZNF692Q9BU19 519 aaPredicted RBP5.55□□□□□ -1.52
TMEM38B-201ENST00000374688 ZFP91Q96JP5 570 aaPredicted RBP5.55□□□□□ -1.52
TMEM38B-201ENST00000374688 ZBTB47Q9UFB7 747 aaPredicted RBP5.55□□□□□ -1.52
TMEM38B-201ENST00000374688 PRDM10Q9NQV6 1147 aa5.54□□□□□ -1.52
TMEM38B-201ENST00000374688 PTMSP20962 102 aa5.54□□□□□ -1.52
TMEM38B-201ENST00000374688 OSCARQ8IYS5 282 aa5.54□□□□□ -1.52
TMEM38B-201ENST00000374688 SPOCK2Q92563 424 aa5.53□□□□□ -1.52
TMEM38B-201ENST00000374688 NAP1L2Q9ULW6 460 aaPredicted RBP5.53□□□□□ -1.52
TMEM38B-201ENST00000374688 SPDYE1Q8NFV5 336 aaPredicted RBP5.52□□□□□ -1.53
TMEM38B-201ENST00000374688 REM2Q8IYK8 340 aaPredicted RBP5.51□□□□□ -1.53
TMEM38B-201ENST00000374688 CNPY4Q8N129 248 aa5.51□□□□□ -1.53
TMEM38B-201ENST00000374688 CLCN6P51797 869 aa5.5□□□□□ -1.53
TMEM38B-201ENST00000374688 PLCD4Q9BRC7 762 aa5.5□□□□□ -1.53
TMEM38B-201ENST00000374688 USP35Q9P2H5 1018 aa5.5□□□□□ -1.53
TMEM38B-201ENST00000374688 RTL5Q5HYW3 569 aaPredicted RBP5.5□□□□□ -1.53
TMEM38B-201ENST00000374688 CWC22Q9HCG8 908 aaKnown RBP5.49□□□□□ -1.53
TMEM38B-201ENST00000374688 ABCB7O75027 752 aa5.49□□□□□ -1.53
TMEM38B-201ENST00000374688 PPM1GO15355 546 aaPredicted RBP5.48□□□□□ -1.53
TMEM38B-201ENST00000374688 CCER1Q8TC90 406 aaPredicted RBP5.48□□□□□ -1.53
TMEM38B-201ENST00000374688 WWC1Q8IX03 1113 aa5.48□□□□□ -1.53
TMEM38B-201ENST00000374688 SUPT16HQ9Y5B9 1047 aaKnown RBP5.48□□□□□ -1.53
TMEM38B-201ENST00000374688 PABPN1Q86U42 306 aaKnown RBP eCLIP5.47□□□□□ -1.53
TMEM38B-201ENST00000374688 RAD21O60216 631 aa5.47□□□□□ -1.53
TMEM38B-201ENST00000374688 RBM25P49756 843 aaKnown RBP5.47□□□□□ -1.53
TMEM38B-201ENST00000374688 TMED8Q6PL24 325 aaPredicted RBP5.47□□□□□ -1.53
TMEM38B-201ENST00000374688 ILDR1Q86SU0 546 aaPredicted RBP5.47□□□□□ -1.53
TMEM38B-201ENST00000374688 CERS3Q8IU89 383 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms