RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 ASTLQ6HA08 431 aaPredicted RBP13.44□□□□□ -0.26
LINC00474-201ENST00000374014 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
LINC00474-201ENST00000374014 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
LINC00474-201ENST00000374014 KIF12Q96FN5 646 aa13.39□□□□□ -0.27
LINC00474-201ENST00000374014 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
LINC00474-201ENST00000374014 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
LINC00474-201ENST00000374014 METRNQ9UJH8 293 aa13.36□□□□□ -0.27
LINC00474-201ENST00000374014 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
LINC00474-201ENST00000374014 C7P10643 843 aa13.34□□□□□ -0.27
LINC00474-201ENST00000374014 MAP3K13O43283 966 aa13.3□□□□□ -0.28
LINC00474-201ENST00000374014 ATN1P54259 1190 aaPredicted RBP13.3□□□□□ -0.28
LINC00474-201ENST00000374014 FKBP8Q14318 412 aa13.3□□□□□ -0.28
LINC00474-201ENST00000374014 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
LINC00474-201ENST00000374014 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
LINC00474-201ENST00000374014 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
LINC00474-201ENST00000374014 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
LINC00474-201ENST00000374014 TIE1P35590 1138 aa13.22□□□□□ -0.29
LINC00474-201ENST00000374014 NUBP1P53384 320 aa13.22□□□□□ -0.29
LINC00474-201ENST00000374014 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
LINC00474-201ENST00000374014 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
LINC00474-201ENST00000374014 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
LINC00474-201ENST00000374014 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
LINC00474-201ENST00000374014 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
LINC00474-201ENST00000374014 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
LINC00474-201ENST00000374014 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
LINC00474-201ENST00000374014 POTEMA6NI47 508 aa13.08□□□□□ -0.32
LINC00474-201ENST00000374014 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
LINC00474-201ENST00000374014 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
LINC00474-201ENST00000374014 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
LINC00474-201ENST00000374014 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
LINC00474-201ENST00000374014 SEC24BO95487 1268 aa13.06□□□□□ -0.32
LINC00474-201ENST00000374014 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
LINC00474-201ENST00000374014 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
LINC00474-201ENST00000374014 IER5LQ5T953 404 aa13.03□□□□□ -0.32
LINC00474-201ENST00000374014 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
LINC00474-201ENST00000374014 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
LINC00474-201ENST00000374014 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
LINC00474-201ENST00000374014 PYGBP11216 843 aa12.95□□□□□ -0.34
LINC00474-201ENST00000374014 LCE2DQ5TA82 110 aaPredicted RBP12.94□□□□□ -0.34
LINC00474-201ENST00000374014 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
LINC00474-201ENST00000374014 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
LINC00474-201ENST00000374014 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
LINC00474-201ENST00000374014 PLCG2P16885 1265 aa12.88□□□□□ -0.35
LINC00474-201ENST00000374014 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
LINC00474-201ENST00000374014 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
LINC00474-201ENST00000374014 GSE1Q14687 1217 aa12.84□□□□□ -0.35
LINC00474-201ENST00000374014 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
LINC00474-201ENST00000374014 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
LINC00474-201ENST00000374014 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
LINC00474-201ENST00000374014 CHRM1P11229 460 aaPredicted RBP12.75□□□□□ -0.37
LINC00474-201ENST00000374014 ST18O60284 1047 aa12.68□□□□□ -0.38
LINC00474-201ENST00000374014 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
LINC00474-201ENST00000374014 PSEN1P49768 467 aa12.67□□□□□ -0.38
LINC00474-201ENST00000374014 MKRN3Q13064 507 aaKnown RBP12.67□□□□□ -0.38
LINC00474-201ENST00000374014 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
LINC00474-201ENST00000374014 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.67□□□□□ -0.38
LINC00474-201ENST00000374014 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
LINC00474-201ENST00000374014 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
LINC00474-201ENST00000374014 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
LINC00474-201ENST00000374014 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
LINC00474-201ENST00000374014 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
LINC00474-201ENST00000374014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00474-201ENST00000374014 SNPHO15079 494 aa12.59□□□□□ -0.39
LINC00474-201ENST00000374014 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
LINC00474-201ENST00000374014 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
LINC00474-201ENST00000374014 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
LINC00474-201ENST00000374014 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
LINC00474-201ENST00000374014 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
LINC00474-201ENST00000374014 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
LINC00474-201ENST00000374014 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
LINC00474-201ENST00000374014 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
LINC00474-201ENST00000374014 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
LINC00474-201ENST00000374014 G3V3G9 751 aa12.4□□□□□ -0.42
LINC00474-201ENST00000374014 EMP3P54852 163 aa12.37□□□□□ -0.43
LINC00474-201ENST00000374014 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
LINC00474-201ENST00000374014 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
LINC00474-201ENST00000374014 MMRN1Q13201 1228 aa12.3□□□□□ -0.44
LINC00474-201ENST00000374014 HS3ST6Q96QI5 342 aa12.29□□□□□ -0.44
LINC00474-201ENST00000374014 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
LINC00474-201ENST00000374014 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
LINC00474-201ENST00000374014 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
LINC00474-201ENST00000374014 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
LINC00474-201ENST00000374014 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
LINC00474-201ENST00000374014 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
LINC00474-201ENST00000374014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
LINC00474-201ENST00000374014 SOX12O15370 315 aa12.23□□□□□ -0.45
LINC00474-201ENST00000374014 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
LINC00474-201ENST00000374014 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
LINC00474-201ENST00000374014 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
LINC00474-201ENST00000374014 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
LINC00474-201ENST00000374014 KRTAP3-3Q9BYR6 98 aa12.21□□□□□ -0.45
LINC00474-201ENST00000374014 KRTAP3-2Q9BYR7 98 aa12.21□□□□□ -0.45
LINC00474-201ENST00000374014 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
LINC00474-201ENST00000374014 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
LINC00474-201ENST00000374014 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
LINC00474-201ENST00000374014 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
LINC00474-201ENST00000374014 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
LINC00474-201ENST00000374014 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
LINC00474-201ENST00000374014 ERBB3P21860 1342 aa12.12□□□□□ -0.47
LINC00474-201ENST00000374014 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms