RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 CFAP53Q96M91 514 aa14.73□□□□□ -0.05
PHACTR4-202ENST00000373839 NACADO15069 1562 aa14.72□□□□□ -0.05
PHACTR4-202ENST00000373839 GOLGA3Q08378 1498 aa14.72□□□□□ -0.05
PHACTR4-202ENST00000373839 CCDC136Q96JN2 1154 aa14.71□□□□□ -0.05
PHACTR4-202ENST00000373839 KIF27Q86VH2 1401 aa14.71□□□□□ -0.05
PHACTR4-202ENST00000373839 FKBP8Q14318 412 aa14.71□□□□□ -0.06
PHACTR4-202ENST00000373839 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.06
PHACTR4-202ENST00000373839 ARID4BQ4LE39 1312 aaPredicted RBP14.7□□□□□ -0.06
PHACTR4-202ENST00000373839 EIF5BO60841 1220 aaKnown RBP14.69□□□□□ -0.06
PHACTR4-202ENST00000373839 CFDP1Q9UEE9 299 aaPredicted RBP14.69□□□□□ -0.06
PHACTR4-202ENST00000373839 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
PHACTR4-202ENST00000373839 A0A0G2JS52 829 aa14.68□□□□□ -0.06
PHACTR4-202ENST00000373839 SALL2Q9Y467 1007 aaPredicted RBP14.66□□□□□ -0.06
PHACTR4-202ENST00000373839 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
PHACTR4-202ENST00000373839 ERCC6Q03468 1493 aa14.65□□□□□ -0.06
PHACTR4-202ENST00000373839 CDK11BP21127 795 aaKnown RBP14.65□□□□□ -0.06
PHACTR4-202ENST00000373839 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
PHACTR4-202ENST00000373839 ZBTB7CA1YPR0 619 aa14.62□□□□□ -0.07
PHACTR4-202ENST00000373839 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
PHACTR4-202ENST00000373839 KNSTRNQ9Y448 316 aa14.6□□□□□ -0.07
PHACTR4-202ENST00000373839 CEP164Q9UPV0 1460 aa14.59□□□□□ -0.07
PHACTR4-202ENST00000373839 NUDCQ9Y266 331 aa14.58□□□□□ -0.07
PHACTR4-202ENST00000373839 CHMP4BQ9H444 224 aaKnown RBP14.56□□□□□ -0.08
PHACTR4-202ENST00000373839 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
PHACTR4-202ENST00000373839 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
PHACTR4-202ENST00000373839 ANP32EQ9BTT0 268 aa14.55□□□□□ -0.08
PHACTR4-202ENST00000373839 NCLP19338 710 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-202ENST00000373839 BECN1Q14457 450 aa14.54□□□□□ -0.08
PHACTR4-202ENST00000373839 POGKQ9P215 609 aa14.54□□□□□ -0.08
PHACTR4-202ENST00000373839 KANK1Q14678 1352 aa14.54□□□□□ -0.08
PHACTR4-202ENST00000373839 MAPK8IP3Q9UPT6 1336 aa14.54□□□□□ -0.08
PHACTR4-202ENST00000373839 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
PHACTR4-202ENST00000373839 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
PHACTR4-202ENST00000373839 PNNQ9H307 717 aaKnown RBP14.53□□□□□ -0.08
PHACTR4-202ENST00000373839 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.08
PHACTR4-202ENST00000373839 CASC1Q6TDU7 716 aa14.52□□□□□ -0.09
PHACTR4-202ENST00000373839 DDRGK1Q96HY6 314 aa14.51□□□□□ -0.09
PHACTR4-202ENST00000373839 CCNB3Q8WWL7 1395 aa14.51□□□□□ -0.09
PHACTR4-202ENST00000373839 GOLGA6L22H0YM25 854 aa14.5□□□□□ -0.09
PHACTR4-202ENST00000373839 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
PHACTR4-202ENST00000373839 MS4A1P11836 297 aa14.49□□□□□ -0.09
PHACTR4-202ENST00000373839 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
PHACTR4-202ENST00000373839 FTSJ3Q8IY81 847 aaKnown RBP14.45□□□□□ -0.1
PHACTR4-202ENST00000373839 PPM1GO15355 546 aaPredicted RBP14.45□□□□□ -0.1
PHACTR4-202ENST00000373839 ZRSR1Q15695 479 aaKnown RBP14.44□□□□□ -0.1
PHACTR4-202ENST00000373839 ARXQ96QS3 562 aa14.44□□□□□ -0.1
PHACTR4-202ENST00000373839 LMOD2Q6P5Q4 547 aa14.43□□□□□ -0.1
PHACTR4-202ENST00000373839 CARMIL2Q6F5E8 1435 aa14.41□□□□□ -0.1
PHACTR4-202ENST00000373839 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
PHACTR4-202ENST00000373839 NPHP1O15259 732 aa14.41□□□□□ -0.1
PHACTR4-202ENST00000373839 GLIPR1L2Q4G1C9 344 aa14.4□□□□□ -0.1
PHACTR4-202ENST00000373839 TMF1P82094 1093 aa14.4□□□□□ -0.1
PHACTR4-202ENST00000373839 CARMIL1Q5VZK9 1371 aa14.4□□□□□ -0.1
PHACTR4-202ENST00000373839 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
PHACTR4-202ENST00000373839 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
PHACTR4-202ENST00000373839 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
PHACTR4-202ENST00000373839 HIRIP3Q9BW71 556 aaPredicted RBP14.36□□□□□ -0.11
PHACTR4-202ENST00000373839 CUX2O14529 1486 aa14.35□□□□□ -0.11
PHACTR4-202ENST00000373839 MIER1Q8N108 512 aa14.33□□□□□ -0.11
PHACTR4-202ENST00000373839 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.11
PHACTR4-202ENST00000373839 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
PHACTR4-202ENST00000373839 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.12
PHACTR4-202ENST00000373839 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
PHACTR4-202ENST00000373839 OS9Q13438 667 aaPredicted RBP14.32□□□□□ -0.12
PHACTR4-202ENST00000373839 TRIM44Q96DX7 344 aaPredicted RBP14.32□□□□□ -0.12
PHACTR4-202ENST00000373839 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
PHACTR4-202ENST00000373839 U2SURPO15042 1029 aaKnown RBP14.3□□□□□ -0.12
PHACTR4-202ENST00000373839 NEUROD2Q15784 382 aa14.3□□□□□ -0.12
PHACTR4-202ENST00000373839 EFCAB2Q5VUJ9 269 aa14.29□□□□□ -0.12
PHACTR4-202ENST00000373839 SRPK2P78362 688 aaKnown RBP14.29□□□□□ -0.12
PHACTR4-202ENST00000373839 HDGFL2Q7Z4V5 671 aaPredicted RBP14.28□□□□□ -0.12
PHACTR4-202ENST00000373839 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
PHACTR4-202ENST00000373839 FGD1P98174 961 aa14.27□□□□□ -0.13
PHACTR4-202ENST00000373839 IRX6P78412 446 aaPredicted RBP14.27□□□□□ -0.13
PHACTR4-202ENST00000373839 MLECQ14165 292 aa14.27□□□□□ -0.13
PHACTR4-202ENST00000373839 NBR1Q14596 966 aa14.26□□□□□ -0.13
PHACTR4-202ENST00000373839 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
PHACTR4-202ENST00000373839 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
PHACTR4-202ENST00000373839 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
PHACTR4-202ENST00000373839 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
PHACTR4-202ENST00000373839 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
PHACTR4-202ENST00000373839 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
PHACTR4-202ENST00000373839 KCNJ4P48050 445 aa14.24□□□□□ -0.13
PHACTR4-202ENST00000373839 GOLGA6L6A8MZA4 724 aa14.24□□□□□ -0.13
PHACTR4-202ENST00000373839 NRDCO43847 1150 aa14.23□□□□□ -0.13
PHACTR4-202ENST00000373839 GGT6Q6P531 493 aa14.23□□□□□ -0.13
PHACTR4-202ENST00000373839 FRAT1Q92837 279 aaPredicted RBP14.23□□□□□ -0.13
PHACTR4-202ENST00000373839 PTMAP06454 111 aaKnown RBP14.23□□□□□ -0.13
PHACTR4-202ENST00000373839 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
PHACTR4-202ENST00000373839 TNNT2P45379 298 aaPredicted RBP14.22□□□□□ -0.13
PHACTR4-202ENST00000373839 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
PHACTR4-202ENST00000373839 PPP4R2Q9NY27 417 aa14.21□□□□□ -0.13
PHACTR4-202ENST00000373839 MCCP23508 829 aa14.21□□□□□ -0.14
PHACTR4-202ENST00000373839 ANKRD30AQ9BXX3 1397 aa14.2□□□□□ -0.14
PHACTR4-202ENST00000373839 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
PHACTR4-202ENST00000373839 HDAC5Q9UQL6 1122 aa14.2□□□□□ -0.14
PHACTR4-202ENST00000373839 IPO8O15397 1037 aaKnown RBP14.19□□□□□ -0.14
PHACTR4-202ENST00000373839 SOGA1O94964 1423 aa14.19□□□□□ -0.14
PHACTR4-202ENST00000373839 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
PHACTR4-202ENST00000373839 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms