RNA–Protein interactions for RNA: ENST00000373344.9

ATRX-201, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATRX, Length 11,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-201ENST00000373344 HIRIP3Q9BW71 556 aaPredicted RBP7.12□□□□□ -1.27
ATRX-201ENST00000373344 DDX10Q13206 875 aaKnown RBP7.1□□□□□ -1.27
ATRX-201ENST00000373344 EIF4G1Q04637 1599 aaKnown RBP7.1□□□□□ -1.27
ATRX-201ENST00000373344 WDR43Q15061 677 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATRX-201ENST00000373344 GGT6Q6P531 493 aa7.09□□□□□ -1.27
ATRX-201ENST00000373344 WRNQ14191 1432 aaPredicted RBP eCLIP7.09□□□□□ -1.27
ATRX-201ENST00000373344 CECR2Q9BXF3 1484 aa7.09□□□□□ -1.27
ATRX-201ENST00000373344 RSF1Q96T23 1441 aaPredicted RBP7.09□□□□□ -1.27
ATRX-201ENST00000373344 KIF27Q86VH2 1401 aa7.08□□□□□ -1.28
ATRX-201ENST00000373344 NPHP1O15259 732 aa7.07□□□□□ -1.28
ATRX-201ENST00000373344 CYB5RLQ6IPT4 315 aa7.07□□□□□ -1.28
ATRX-201ENST00000373344 AEBP2Q6ZN18 517 aaPredicted RBP7.07□□□□□ -1.28
ATRX-201ENST00000373344 POGKQ9P215 609 aa7.06□□□□□ -1.28
ATRX-201ENST00000373344 CLIP1P30622 1438 aa7.06□□□□□ -1.28
ATRX-201ENST00000373344 SOX12O15370 315 aa7.06□□□□□ -1.28
ATRX-201ENST00000373344 HNRNPUQ00839 825 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATRX-201ENST00000373344 RTL5Q5HYW3 569 aaPredicted RBP7.05□□□□□ -1.28
ATRX-201ENST00000373344 BAZ1AQ9NRL2 1556 aaPredicted RBP7.05□□□□□ -1.28
ATRX-201ENST00000373344 PDS5BQ9NTI5 1447 aa7.04□□□□□ -1.28
ATRX-201ENST00000373344 CUX2O14529 1486 aa7.02□□□□□ -1.29
ATRX-201ENST00000373344 HDGFP51858 240 aaKnown RBP7.02□□□□□ -1.29
ATRX-201ENST00000373344 SAFB2Q14151 953 aaKnown RBP eCLIP7.02□□□□□ -1.29
ATRX-201ENST00000373344 DCAF1Q9Y4B6 1507 aa7.02□□□□□ -1.29
ATRX-201ENST00000373344 GOLGA3Q08378 1498 aa7.02□□□□□ -1.29
ATRX-201ENST00000373344 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
ATRX-201ENST00000373344 EIF4G2P78344 907 aaKnown RBP eCLIP7.02□□□□□ -1.29
ATRX-201ENST00000373344 TDRD9Q8NDG6 1382 aaKnown RBP7.01□□□□□ -1.29
ATRX-201ENST00000373344 HSP90AA1P07900 732 aaKnown RBP7.01□□□□□ -1.29
ATRX-201ENST00000373344 TNNT2P45379 298 aaPredicted RBP7.01□□□□□ -1.29
ATRX-201ENST00000373344 CARD11Q9BXL7 1154 aa7□□□□□ -1.29
ATRX-201ENST00000373344 LAS1LQ9Y4W2 734 aaKnown RBP7□□□□□ -1.29
ATRX-201ENST00000373344 SOGA1O94964 1423 aa7□□□□□ -1.29
ATRX-201ENST00000373344 PAK3O75914 559 aaPredicted RBP7□□□□□ -1.29
ATRX-201ENST00000373344 STK26Q9P289 416 aa7□□□□□ -1.29
ATRX-201ENST00000373344 CARMIL1Q5VZK9 1371 aa6.99□□□□□ -1.29
ATRX-201ENST00000373344 NEUROD2Q15784 382 aa6.99□□□□□ -1.29
ATRX-201ENST00000373344 CCDC9Q9Y3X0 531 aaKnown RBP6.98□□□□□ -1.29
ATRX-201ENST00000373344 KNSTRNQ9Y448 316 aa6.98□□□□□ -1.29
ATRX-201ENST00000373344 GTF3C3Q9Y5Q9 886 aa6.98□□□□□ -1.29
ATRX-201ENST00000373344 MRS2Q9HD23 443 aa6.98□□□□□ -1.29
ATRX-201ENST00000373344 SRPK2P78362 688 aaKnown RBP6.98□□□□□ -1.29
ATRX-201ENST00000373344 CARMIL2Q6F5E8 1435 aa6.98□□□□□ -1.29
ATRX-201ENST00000373344 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.98□□□□□ -1.29
ATRX-201ENST00000373344 CCNB3Q8WWL7 1395 aa6.98□□□□□ -1.29
ATRX-201ENST00000373344 DCAF11Q8TEB1 546 aa6.98□□□□□ -1.29
ATRX-201ENST00000373344 KANK1Q14678 1352 aa6.97□□□□□ -1.29
ATRX-201ENST00000373344 CEP162Q5TB80 1403 aa6.97□□□□□ -1.29
ATRX-201ENST00000373344 OSCARQ8IYS5 282 aa6.97□□□□□ -1.29
ATRX-201ENST00000373344 CDCA8Q53HL2 280 aa6.96□□□□□ -1.3
ATRX-201ENST00000373344 UPF2Q9HAU5 1272 aaKnown RBP6.96□□□□□ -1.3
ATRX-201ENST00000373344 SMARCA2P51531 1590 aa6.95□□□□□ -1.3
ATRX-201ENST00000373344 CFAP53Q96M91 514 aa6.95□□□□□ -1.3
ATRX-201ENST00000373344 CEP164Q9UPV0 1460 aa6.95□□□□□ -1.3
ATRX-201ENST00000373344 FKBP8Q14318 412 aa6.95□□□□□ -1.3
ATRX-201ENST00000373344 JPH4Q96JJ6 628 aa6.95□□□□□ -1.3
ATRX-201ENST00000373344 MYH16Q9H6N6 1097 aa6.95□□□□□ -1.3
ATRX-201ENST00000373344 U2SURPO15042 1029 aaKnown RBP6.94□□□□□ -1.3
ATRX-201ENST00000373344 EEA1Q15075 1411 aa6.94□□□□□ -1.3
ATRX-201ENST00000373344 KIF3BO15066 747 aa6.94□□□□□ -1.3
ATRX-201ENST00000373344 HNRNPMP52272 730 aaKnown RBP eCLIP6.94□□□□□ -1.31e-7■■■■■ 32.5
ATRX-201ENST00000373344 NUTM2FA1L443 756 aa6.94□□□□□ -1.3
ATRX-201ENST00000373344 NUTM2DQ5VT03 806 aaPredicted RBP6.94□□□□□ -1.3
ATRX-201ENST00000373344 MROH2BQ7Z745 1585 aa6.93□□□□□ -1.3
ATRX-201ENST00000373344 CC2D1BQ5T0F9 858 aaKnown RBP6.93□□□□□ -1.3
ATRX-201ENST00000373344 EFCAB2Q5VUJ9 269 aa6.93□□□□□ -1.3
ATRX-201ENST00000373344 MAPK8IP3Q9UPT6 1336 aa6.92□□□□□ -1.3
ATRX-201ENST00000373344 TULP1O00294 542 aaPredicted RBP6.92□□□□□ -1.3
ATRX-201ENST00000373344 ABCC8Q09428 1581 aa6.92□□□□□ -1.3
ATRX-201ENST00000373344 CCDC88BA6NC98 1476 aa6.92□□□□□ -1.3
ATRX-201ENST00000373344 FHAD1B1AJZ9 1412 aa6.92□□□□□ -1.3
ATRX-201ENST00000373344 SIN3AQ96ST3 1273 aa6.92□□□□□ -1.3
ATRX-201ENST00000373344 NUDCQ9Y266 331 aa6.92□□□□□ -1.3
ATRX-201ENST00000373344 EID1Q9Y6B2 187 aa6.91□□□□□ -1.3
ATRX-201ENST00000373344 WIZO95785 1651 aa6.91□□□□□ -1.3
ATRX-201ENST00000373344 ANP32AP39687 249 aaKnown RBP6.91□□□□□ -1.3
ATRX-201ENST00000373344 WASHC2CQ9Y4E1 1318 aa6.91□□□□□ -1.3
ATRX-201ENST00000373344 CSB-PGBD3P0DP91 1061 aa6.91□□□□□ -1.3
ATRX-201ENST00000373344 TAOK2Q9UL54 1235 aa6.91□□□□□ -1.3
ATRX-201ENST00000373344 FOXD1Q16676 465 aa6.9□□□□□ -1.3
ATRX-201ENST00000373344 ZNF330Q9Y3S2 320 aaPredicted RBP6.9□□□□□ -1.3
ATRX-201ENST00000373344 CCDC136Q96JN2 1154 aa6.9□□□□□ -1.3
ATRX-201ENST00000373344 GOLGA2Q08379 1002 aa6.9□□□□□ -1.31
ATRX-201ENST00000373344 IRX6P78412 446 aaPredicted RBP6.89□□□□□ -1.31
ATRX-201ENST00000373344 CADPSQ9ULU8 1353 aa6.89□□□□□ -1.31
ATRX-201ENST00000373344 FAM69CQ0P6D2 419 aa6.89□□□□□ -1.31
ATRX-201ENST00000373344 ACIN1Q9UKV3 1341 aaKnown RBP6.88□□□□□ -1.31
ATRX-201ENST00000373344 TMF1P82094 1093 aa6.88□□□□□ -1.31
ATRX-201ENST00000373344 FTSJ3Q8IY81 847 aaKnown RBP6.87□□□□□ -1.31
ATRX-201ENST00000373344 PHF23Q9BUL5 403 aaPredicted RBP6.87□□□□□ -1.31
ATRX-201ENST00000373344 TNIKQ9UKE5 1360 aa6.87□□□□□ -1.31
ATRX-201ENST00000373344 RTF1Q92541 710 aaKnown RBP6.86□□□□□ -1.31
ATRX-201ENST00000373344 SPAG9O60271 1321 aaKnown RBP6.86□□□□□ -1.31
ATRX-201ENST00000373344 PKD2Q13563 968 aa6.86□□□□□ -1.31
ATRX-201ENST00000373344 NGDNQ8NEJ9 315 aaKnown RBP6.86□□□□□ -1.31
ATRX-201ENST00000373344 FRAT1Q92837 279 aaPredicted RBP6.85□□□□□ -1.31
ATRX-201ENST00000373344 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
ATRX-201ENST00000373344 PNNQ9H307 717 aaKnown RBP6.85□□□□□ -1.31
ATRX-201ENST00000373344 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
ATRX-201ENST00000373344 FANCD2Q9BXW9 1451 aa6.84□□□□□ -1.31
ATRX-201ENST00000373344 EVA1CP58658 441 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms