RNA–Protein interactions for RNA: ENST00000373275.4

BRWD3-201, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD3, Length 11,381 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-201ENST00000373275 PPP4R2Q9NY27 417 aa8.72□□□□□ -1.01
BRWD3-201ENST00000373275 MYH16Q9H6N6 1097 aa8.72□□□□□ -1.01
BRWD3-201ENST00000373275 PKNOX2Q96KN3 472 aa8.71□□□□□ -1.01
BRWD3-201ENST00000373275 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.01
BRWD3-201ENST00000373275 MTERF4Q7Z6M4 381 aaKnown RBP8.71□□□□□ -1.02
BRWD3-201ENST00000373275 KIAA2012Q0VF49 1180 aa8.71□□□□□ -1.02
BRWD3-201ENST00000373275 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
BRWD3-201ENST00000373275 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
BRWD3-201ENST00000373275 TONSLQ96HA7 1378 aa8.69□□□□□ -1.02
BRWD3-201ENST00000373275 GOLGA6L1Q8N7Z2 621 aa8.69□□□□□ -1.02
BRWD3-201ENST00000373275 CASC1Q6TDU7 716 aa8.68□□□□□ -1.02
BRWD3-201ENST00000373275 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
BRWD3-201ENST00000373275 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
BRWD3-201ENST00000373275 MAP7D2Q96T17 732 aa8.68□□□□□ -1.02
BRWD3-201ENST00000373275 APPP05067 770 aa8.68□□□□□ -1.02
BRWD3-201ENST00000373275 TMC1Q8TDI8 760 aa8.67□□□□□ -1.02
BRWD3-201ENST00000373275 CSRNP3Q8WYN3 585 aa8.67□□□□□ -1.02
BRWD3-201ENST00000373275 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.66□□□□□ -1.02
BRWD3-201ENST00000373275 SUPT16HQ9Y5B9 1047 aaKnown RBP8.66□□□□□ -1.02
BRWD3-201ENST00000373275 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
BRWD3-201ENST00000373275 PRKCSHP14314 528 aaPredicted RBP8.65□□□□□ -1.02
BRWD3-201ENST00000373275 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.03
BRWD3-201ENST00000373275 MIER1Q8N108 512 aa8.63□□□□□ -1.03
BRWD3-201ENST00000373275 FAM9BQ8IZU0 186 aa8.63□□□□□ -1.03
BRWD3-201ENST00000373275 CHMP4BQ9H444 224 aaKnown RBP8.63□□□□□ -1.03
BRWD3-201ENST00000373275 GBP4Q96PP9 640 aa8.62□□□□□ -1.03
BRWD3-201ENST00000373275 SYAP1Q96A49 352 aaPredicted RBP8.62□□□□□ -1.03
BRWD3-201ENST00000373275 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
BRWD3-201ENST00000373275 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
BRWD3-201ENST00000373275 HTATSF1O43719 755 aaKnown RBP8.61□□□□□ -1.03
BRWD3-201ENST00000373275 DDX10Q13206 875 aaKnown RBP8.6□□□□□ -1.03
BRWD3-201ENST00000373275 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
BRWD3-201ENST00000373275 HSCBQ8IWL3 235 aa8.59□□□□□ -1.03
BRWD3-201ENST00000373275 WDR43Q15061 677 aaKnown RBP eCLIP8.59□□□□□ -1.03
BRWD3-201ENST00000373275 GOLGA6L4A6NEF3 574 aa8.58□□□□□ -1.04
BRWD3-201ENST00000373275 GPS2Q13227 327 aa8.58□□□□□ -1.04
BRWD3-201ENST00000373275 CCDC66A2RUB6 948 aa8.57□□□□□ -1.04
BRWD3-201ENST00000373275 HSP90AB1P08238 724 aaKnown RBP8.57□□□□□ -1.04
BRWD3-201ENST00000373275 MS4A1P11836 297 aa8.56□□□□□ -1.04
BRWD3-201ENST00000373275 TEX35Q5T0J7 233 aa8.56□□□□□ -1.04
BRWD3-201ENST00000373275 IPO9Q96P70 1041 aaKnown RBP8.56□□□□□ -1.04
BRWD3-201ENST00000373275 CSPP1Q1MSJ5 1256 aa8.56□□□□□ -1.04
BRWD3-201ENST00000373275 PHF14O94880 888 aa8.56□□□□□ -1.04
BRWD3-201ENST00000373275 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
BRWD3-201ENST00000373275 TCERG1O14776 1098 aaKnown RBP8.53□□□□□ -1.04
BRWD3-201ENST00000373275 DRC7Q8IY82 874 aa8.53□□□□□ -1.04
BRWD3-201ENST00000373275 ZNF771Q7L3S4 317 aaPredicted RBP8.53□□□□□ -1.04
BRWD3-201ENST00000373275 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
BRWD3-201ENST00000373275 CWC15Q9P013 229 aaKnown RBP8.53□□□□□ -1.04
BRWD3-201ENST00000373275 GSE1Q14687 1217 aa8.52□□□□□ -1.05
BRWD3-201ENST00000373275 FANCIQ9NVI1 1328 aa8.52□□□□□ -1.05
BRWD3-201ENST00000373275 DDX11L8A8MPP1 907 aa8.51□□□□□ -1.05
BRWD3-201ENST00000373275 TPM2P07951 284 aa8.51□□□□□ -1.05
BRWD3-201ENST00000373275 RRP9O43818 475 aaKnown RBP8.5□□□□□ -1.05
BRWD3-201ENST00000373275 SKOR2Q2VWA4 1001 aaPredicted RBP8.49□□□□□ -1.05
BRWD3-201ENST00000373275 IRX6P78412 446 aaPredicted RBP8.49□□□□□ -1.05
BRWD3-201ENST00000373275 CCER2I3L3R5 266 aa8.49□□□□□ -1.05
BRWD3-201ENST00000373275 TPM4P67936 248 aa8.49□□□□□ -1.05
BRWD3-201ENST00000373275 TSHZ2Q9NRE2 1034 aa8.48□□□□□ -1.05
BRWD3-201ENST00000373275 MCCP23508 829 aa8.48□□□□□ -1.05
BRWD3-201ENST00000373275 NOC3LQ8WTT2 800 aaKnown RBP8.48□□□□□ -1.05
BRWD3-201ENST00000373275 TSPYL1Q9H0U9 437 aa8.48□□□□□ -1.05
BRWD3-201ENST00000373275 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRWD3-201ENST00000373275 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
BRWD3-201ENST00000373275 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.05
BRWD3-201ENST00000373275 CALD1Q05682 793 aaKnown RBP8.46□□□□□ -1.06
BRWD3-201ENST00000373275 CCDC34Q96HJ3 373 aa8.45□□□□□ -1.06
BRWD3-201ENST00000373275 STK11IPQ8N1F8 1099 aa8.45□□□□□ -1.06
BRWD3-201ENST00000373275 UBE2Q2Q8WVN8 375 aa8.45□□□□□ -1.06
BRWD3-201ENST00000373275 FAM43AQ8N2R8 423 aa8.44□□□□□ -1.06
BRWD3-201ENST00000373275 USP8P40818 1118 aa8.43□□□□□ -1.06
BRWD3-201ENST00000373275 CCDC70Q6NSX1 233 aa8.43□□□□□ -1.06
BRWD3-201ENST00000373275 HMMRO75330 724 aa8.43□□□□□ -1.06
BRWD3-201ENST00000373275 RDXP35241 583 aaKnown RBP8.43□□□□□ -1.06
BRWD3-201ENST00000373275 ACBD3Q9H3P7 528 aa8.42□□□□□ -1.06
BRWD3-201ENST00000373275 ARGLU1Q9NWB6 273 aaPredicted RBP8.42□□□□□ -1.06
BRWD3-201ENST00000373275 EEA1Q15075 1411 aa8.42□□□□□ -1.06
BRWD3-201ENST00000373275 HMGN5P82970 282 aaKnown RBP8.42□□□□□ -1.06
BRWD3-201ENST00000373275 CDCA8Q53HL2 280 aa8.41□□□□□ -1.06
BRWD3-201ENST00000373275 ARID3AQ99856 593 aa8.41□□□□□ -1.06
BRWD3-201ENST00000373275 NEFHP12036 1026 aa8.41□□□□□ -1.06
BRWD3-201ENST00000373275 DIAPH3Q9NSV4 1193 aa8.4□□□□□ -1.06
BRWD3-201ENST00000373275 RRP12Q5JTH9 1297 aaKnown RBP8.4□□□□□ -1.06
BRWD3-201ENST00000373275 B4GALNT3Q6L9W6 998 aa8.4□□□□□ -1.06
BRWD3-201ENST00000373275 CCDC191Q8NCU4 936 aa8.4□□□□□ -1.06
BRWD3-201ENST00000373275 PDE4CQ08493 712 aa8.4□□□□□ -1.07
BRWD3-201ENST00000373275 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.07
BRWD3-201ENST00000373275 RGS3P49796 1198 aa8.39□□□□□ -1.07
BRWD3-201ENST00000373275 ISY1Q9ULR0 285 aaKnown RBP8.39□□□□□ -1.07
BRWD3-201ENST00000373275 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
BRWD3-201ENST00000373275 CDR1P51861 262 aa8.39□□□□□ -1.07
BRWD3-201ENST00000373275 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
BRWD3-201ENST00000373275 KIF16BQ96L93 1317 aa8.38□□□□□ -1.07
BRWD3-201ENST00000373275 TPM3P06753 285 aa8.38□□□□□ -1.07
BRWD3-201ENST00000373275 HAP1P54257 671 aaPredicted RBP8.37□□□□□ -1.07
BRWD3-201ENST00000373275 DCTN1Q14203 1278 aa8.37□□□□□ -1.07
BRWD3-201ENST00000373275 DEF6Q9H4E7 631 aa8.37□□□□□ -1.07
BRWD3-201ENST00000373275 CFAP53Q96M91 514 aa8.37□□□□□ -1.07
BRWD3-201ENST00000373275 GZF1Q9H116 711 aaPredicted RBP8.36□□□□□ -1.07
BRWD3-201ENST00000373275 HSP90B2PQ58FF3 399 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms