RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPTAN1-203ENST00000372739 PPP1R15AO75807 674 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-203ENST00000372739 BECN1Q14457 450 aa12.43□□□□□ -0.42
SPTAN1-203ENST00000372739 CLIP1P30622 1438 aa12.42□□□□□ -0.42
SPTAN1-203ENST00000372739 NBR1Q14596 966 aa12.42□□□□□ -0.42
SPTAN1-203ENST00000372739 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
SPTAN1-203ENST00000372739 NCLP19338 710 aaKnown RBP12.41□□□□□ -0.42
SPTAN1-203ENST00000372739 C14orf37Q86TY3 774 aa12.41□□□□□ -0.42
SPTAN1-203ENST00000372739 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.43
SPTAN1-203ENST00000372739 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
SPTAN1-203ENST00000372739 CDCA8Q53HL2 280 aa12.39□□□□□ -0.43
SPTAN1-203ENST00000372739 CFAP53Q96M91 514 aa12.39□□□□□ -0.43
SPTAN1-203ENST00000372739 ARXQ96QS3 562 aa12.38□□□□□ -0.43
SPTAN1-203ENST00000372739 GOLGA6L22H0YM25 854 aa12.37□□□□□ -0.43
SPTAN1-203ENST00000372739 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
SPTAN1-203ENST00000372739 EEA1Q15075 1411 aa12.37□□□□□ -0.43
SPTAN1-203ENST00000372739 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
SPTAN1-203ENST00000372739 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
SPTAN1-203ENST00000372739 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
SPTAN1-203ENST00000372739 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
SPTAN1-203ENST00000372739 TRIM44Q96DX7 344 aaPredicted RBP12.33□□□□□ -0.44
SPTAN1-203ENST00000372739 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
SPTAN1-203ENST00000372739 KNSTRNQ9Y448 316 aa12.32□□□□□ -0.44
SPTAN1-203ENST00000372739 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
SPTAN1-203ENST00000372739 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
SPTAN1-203ENST00000372739 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
SPTAN1-203ENST00000372739 IRX6P78412 446 aaPredicted RBP12.3□□□□□ -0.44
SPTAN1-203ENST00000372739 ARID4BQ4LE39 1312 aaPredicted RBP12.29□□□□□ -0.44
SPTAN1-203ENST00000372739 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
SPTAN1-203ENST00000372739 MIER1Q8N108 512 aa12.28□□□□□ -0.44
SPTAN1-203ENST00000372739 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
SPTAN1-203ENST00000372739 RGL3Q3MIN7 710 aa12.27□□□□□ -0.45
SPTAN1-203ENST00000372739 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
SPTAN1-203ENST00000372739 CEP162Q5TB80 1403 aa12.26□□□□□ -0.45
SPTAN1-203ENST00000372739 MAPK8IP3Q9UPT6 1336 aa12.26□□□□□ -0.45
SPTAN1-203ENST00000372739 CHMP4BQ9H444 224 aaKnown RBP12.26□□□□□ -0.45
SPTAN1-203ENST00000372739 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
SPTAN1-203ENST00000372739 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
SPTAN1-203ENST00000372739 KIF27Q86VH2 1401 aa12.25□□□□□ -0.45
SPTAN1-203ENST00000372739 NUDCQ9Y266 331 aa12.25□□□□□ -0.45
SPTAN1-203ENST00000372739 PPM1GO15355 546 aaPredicted RBP12.24□□□□□ -0.45
SPTAN1-203ENST00000372739 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
SPTAN1-203ENST00000372739 PNNQ9H307 717 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-203ENST00000372739 NPHP1O15259 732 aa12.23□□□□□ -0.45
SPTAN1-203ENST00000372739 PTMAP06454 111 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-203ENST00000372739 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
SPTAN1-203ENST00000372739 MS4A1P11836 297 aa12.21□□□□□ -0.45
SPTAN1-203ENST00000372739 WRNQ14191 1432 aaPredicted RBP eCLIP12.21□□□□□ -0.45
SPTAN1-203ENST00000372739 POGKQ9P215 609 aa12.21□□□□□ -0.45
SPTAN1-203ENST00000372739 LAS1LQ9Y4W2 734 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-203ENST00000372739 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
SPTAN1-203ENST00000372739 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
SPTAN1-203ENST00000372739 GOLGA6L6A8MZA4 724 aa12.17□□□□□ -0.46
SPTAN1-203ENST00000372739 KANK1Q14678 1352 aa12.17□□□□□ -0.46
SPTAN1-203ENST00000372739 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-203ENST00000372739 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
SPTAN1-203ENST00000372739 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-203ENST00000372739 FHAD1B1AJZ9 1412 aa12.15□□□□□ -0.47
SPTAN1-203ENST00000372739 NEUROD2Q15784 382 aa12.14□□□□□ -0.47
SPTAN1-203ENST00000372739 LMOD2Q6P5Q4 547 aa12.14□□□□□ -0.47
SPTAN1-203ENST00000372739 TNIKQ9UKE5 1360 aa12.14□□□□□ -0.47
SPTAN1-203ENST00000372739 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
SPTAN1-203ENST00000372739 SUPT16HQ9Y5B9 1047 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-203ENST00000372739 FGD1P98174 961 aa12.13□□□□□ -0.47
SPTAN1-203ENST00000372739 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
SPTAN1-203ENST00000372739 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
SPTAN1-203ENST00000372739 HSP90AB1P08238 724 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-203ENST00000372739 TMF1P82094 1093 aa12.11□□□□□ -0.47
SPTAN1-203ENST00000372739 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-203ENST00000372739 PPP4R2Q9NY27 417 aa12.11□□□□□ -0.47
SPTAN1-203ENST00000372739 NRDCO43847 1150 aa12.11□□□□□ -0.47
SPTAN1-203ENST00000372739 KCNJ4P48050 445 aa12.11□□□□□ -0.47
SPTAN1-203ENST00000372739 ERICH6BQ5W0A0 696 aa12.1□□□□□ -0.47
SPTAN1-203ENST00000372739 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
SPTAN1-203ENST00000372739 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-203ENST00000372739 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-203ENST00000372739 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
SPTAN1-203ENST00000372739 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-203ENST00000372739 BAZ1AQ9NRL2 1556 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-203ENST00000372739 RGS3P49796 1198 aa12.07□□□□□ -0.48
SPTAN1-203ENST00000372739 MCCP23508 829 aa12.07□□□□□ -0.48
SPTAN1-203ENST00000372739 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-203ENST00000372739 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-203ENST00000372739 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
SPTAN1-203ENST00000372739 HSCBQ8IWL3 235 aa12.05□□□□□ -0.48
SPTAN1-203ENST00000372739 GOLGA6L4A6NEF3 574 aa12.05□□□□□ -0.48
SPTAN1-203ENST00000372739 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
SPTAN1-203ENST00000372739 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
SPTAN1-203ENST00000372739 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-203ENST00000372739 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
SPTAN1-203ENST00000372739 NOP58Q9Y2X3 529 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-203ENST00000372739 RTF1Q92541 710 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-203ENST00000372739 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-203ENST00000372739 CHAF1AQ13111 956 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-203ENST00000372739 NAP1L5Q96NT1 182 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-203ENST00000372739 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
SPTAN1-203ENST00000372739 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
SPTAN1-203ENST00000372739 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
SPTAN1-203ENST00000372739 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
SPTAN1-203ENST00000372739 SMARCA2P51531 1590 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms