RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
SPTAN1-202ENST00000372731 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
SPTAN1-202ENST00000372731 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
SPTAN1-202ENST00000372731 CLSTN1O94985 981 aa12.14□□□□□ -0.47
SPTAN1-202ENST00000372731 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
SPTAN1-202ENST00000372731 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
SPTAN1-202ENST00000372731 CASC1Q6TDU7 716 aa12.13□□□□□ -0.47
SPTAN1-202ENST00000372731 FKBP8Q14318 412 aa12.12□□□□□ -0.47
SPTAN1-202ENST00000372731 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-202ENST00000372731 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
SPTAN1-202ENST00000372731 EIF5BO60841 1220 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-202ENST00000372731 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.47
SPTAN1-202ENST00000372731 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
SPTAN1-202ENST00000372731 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
SPTAN1-202ENST00000372731 GLIPR1L2Q4G1C9 344 aa12.06□□□□□ -0.48
SPTAN1-202ENST00000372731 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
SPTAN1-202ENST00000372731 ACIN1Q9UKV3 1341 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-202ENST00000372731 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
SPTAN1-202ENST00000372731 ISY1Q9ULR0 285 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-202ENST00000372731 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
SPTAN1-202ENST00000372731 KRI1Q8N9T8 703 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-202ENST00000372731 HDGFP51858 240 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-202ENST00000372731 TRIM44Q96DX7 344 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-202ENST00000372731 GOLGA6L22H0YM25 854 aa12.02□□□□□ -0.49
SPTAN1-202ENST00000372731 OS9Q13438 667 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-202ENST00000372731 PRM3Q9NNZ6 103 aa12.01□□□□□ -0.49
SPTAN1-202ENST00000372731 POGKQ9P215 609 aa12.01□□□□□ -0.49
SPTAN1-202ENST00000372731 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
SPTAN1-202ENST00000372731 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
SPTAN1-202ENST00000372731 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
SPTAN1-202ENST00000372731 FGD1P98174 961 aa11.99□□□□□ -0.49
SPTAN1-202ENST00000372731 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
SPTAN1-202ENST00000372731 CCDC136Q96JN2 1154 aa11.99□□□□□ -0.49
SPTAN1-202ENST00000372731 PLEKHD1A6NEE1 506 aa11.99□□□□□ -0.49
SPTAN1-202ENST00000372731 BECN1Q14457 450 aa11.99□□□□□ -0.49
SPTAN1-202ENST00000372731 RGL3Q3MIN7 710 aa11.98□□□□□ -0.49
SPTAN1-202ENST00000372731 AEBP2Q6ZN18 517 aaPredicted RBP11.98□□□□□ -0.49
SPTAN1-202ENST00000372731 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-202ENST00000372731 LAS1LQ9Y4W2 734 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-202ENST00000372731 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
SPTAN1-202ENST00000372731 NAP1L2Q9ULW6 460 aaPredicted RBP11.96□□□□□ -0.5
SPTAN1-202ENST00000372731 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
SPTAN1-202ENST00000372731 ANP32EQ9BTT0 268 aa11.94□□□□□ -0.5
SPTAN1-202ENST00000372731 CCDC9Q9Y3X0 531 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-202ENST00000372731 ZCCHC6Q5VYS8 1495 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-202ENST00000372731 NBR1Q14596 966 aa11.94□□□□□ -0.5
SPTAN1-202ENST00000372731 DCAF8L1A6NGE4 600 aa11.94□□□□□ -0.5
SPTAN1-202ENST00000372731 G3V3G9 751 aa11.94□□□□□ -0.5
SPTAN1-202ENST00000372731 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
SPTAN1-202ENST00000372731 NUDCQ9Y266 331 aa11.93□□□□□ -0.5
SPTAN1-202ENST00000372731 KCNJ4P48050 445 aa11.93□□□□□ -0.5
SPTAN1-202ENST00000372731 PTMAP06454 111 aaKnown RBP11.92□□□□□ -0.5
SPTAN1-202ENST00000372731 CHMP4BQ9H444 224 aaKnown RBP11.92□□□□□ -0.5
SPTAN1-202ENST00000372731 MRS2Q9HD23 443 aa11.91□□□□□ -0.5
SPTAN1-202ENST00000372731 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
SPTAN1-202ENST00000372731 KNSTRNQ9Y448 316 aa11.91□□□□□ -0.5
SPTAN1-202ENST00000372731 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
SPTAN1-202ENST00000372731 MIER1Q8N108 512 aa11.9□□□□□ -0.5
SPTAN1-202ENST00000372731 NRDCO43847 1150 aa11.89□□□□□ -0.51
SPTAN1-202ENST00000372731 L1TD1Q5T7N2 865 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-202ENST00000372731 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
SPTAN1-202ENST00000372731 KANK1Q14678 1352 aa11.88□□□□□ -0.51
SPTAN1-202ENST00000372731 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
SPTAN1-202ENST00000372731 MLECQ14165 292 aa11.87□□□□□ -0.51
SPTAN1-202ENST00000372731 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
SPTAN1-202ENST00000372731 DNTTIP2Q5QJE6 756 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-202ENST00000372731 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
SPTAN1-202ENST00000372731 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-202ENST00000372731 CLIP1P30622 1438 aa11.85□□□□□ -0.51
SPTAN1-202ENST00000372731 CSB-PGBD3P0DP91 1061 aa11.85□□□□□ -0.51
SPTAN1-202ENST00000372731 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.52
SPTAN1-202ENST00000372731 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-202ENST00000372731 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
SPTAN1-202ENST00000372731 MS4A1P11836 297 aa11.8□□□□□ -0.52
SPTAN1-202ENST00000372731 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
SPTAN1-202ENST00000372731 GOLGA6L4A6NEF3 574 aa11.8□□□□□ -0.52
SPTAN1-202ENST00000372731 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-202ENST00000372731 SOX12O15370 315 aa11.79□□□□□ -0.52
SPTAN1-202ENST00000372731 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-202ENST00000372731 DCAF1Q9Y4B6 1507 aa11.78□□□□□ -0.52
SPTAN1-202ENST00000372731 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
SPTAN1-202ENST00000372731 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-202ENST00000372731 MCCP23508 829 aa11.78□□□□□ -0.52
SPTAN1-202ENST00000372731 PLCB2Q00722 1185 aa11.78□□□□□ -0.52
SPTAN1-202ENST00000372731 MEX3CQ5U5Q3 659 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-202ENST00000372731 NOC3LQ8WTT2 800 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-202ENST00000372731 RB1CC1Q8TDY2 1594 aa11.76□□□□□ -0.53
SPTAN1-202ENST00000372731 SRPK2P78362 688 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-202ENST00000372731 CEP162Q5TB80 1403 aa11.76□□□□□ -0.53
SPTAN1-202ENST00000372731 EIF4G1Q04637 1599 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-202ENST00000372731 CC2D1BQ5T0F9 858 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-202ENST00000372731 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-202ENST00000372731 TAF7LQ5H9L4 462 aa11.74□□□□□ -0.53
SPTAN1-202ENST00000372731 BAZ1BQ9UIG0 1483 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-202ENST00000372731 HSP90AB1P08238 724 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-202ENST00000372731 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
SPTAN1-202ENST00000372731 SAFB2Q14151 953 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPTAN1-202ENST00000372731 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
SPTAN1-202ENST00000372731 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
SPTAN1-202ENST00000372731 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms