RNA–Protein interactions for RNA: ENST00000370687.6

PRIM2-202, Transcript of DNA primase subunit 2, humanhuman

TSL 3 BASIC

Gene PRIM2, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2-202ENST00000370687 C7P10643 843 aa11.3□□□□□ -0.6
PRIM2-202ENST00000370687 SLC39A7Q92504 469 aa11.29□□□□□ -0.6
PRIM2-202ENST00000370687 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
PRIM2-202ENST00000370687 NISCHQ9Y2I1 1504 aa11.26□□□□□ -0.61
PRIM2-202ENST00000370687 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
PRIM2-202ENST00000370687 ATMINO43313 823 aaPredicted RBP11.21□□□□□ -0.61
PRIM2-202ENST00000370687 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
PRIM2-202ENST00000370687 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
PRIM2-202ENST00000370687 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
PRIM2-202ENST00000370687 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRIM2-202ENST00000370687 ATN1P54259 1190 aaPredicted RBP11.05□□□□□ -0.64
PRIM2-202ENST00000370687 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
PRIM2-202ENST00000370687 POTEFA5A3E0 1075 aa11□□□□□ -0.65
PRIM2-202ENST00000370687 MMRN1Q13201 1228 aa10.96□□□□□ -0.65
PRIM2-202ENST00000370687 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
PRIM2-202ENST00000370687 ST18O60284 1047 aa10.9□□□□□ -0.66
PRIM2-202ENST00000370687 SPNS2Q8IVW8 549 aa10.9□□□□□ -0.66
PRIM2-202ENST00000370687 SEC24BO95487 1268 aa10.89□□□□□ -0.67
PRIM2-202ENST00000370687 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
PRIM2-202ENST00000370687 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
PRIM2-202ENST00000370687 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
PRIM2-202ENST00000370687 TIE1P35590 1138 aa10.86□□□□□ -0.67
PRIM2-202ENST00000370687 COLQQ9Y215 455 aaPredicted RBP10.86□□□□□ -0.67
PRIM2-202ENST00000370687 SLAIN1Q8ND83 568 aa10.83□□□□□ -0.68
PRIM2-202ENST00000370687 TRPC6Q9Y210 931 aa10.83□□□□□ -0.68
PRIM2-202ENST00000370687 SPDYE4A6NLX3 237 aa10.81□□□□□ -0.68
PRIM2-202ENST00000370687 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
PRIM2-202ENST00000370687 IER5LQ5T953 404 aa10.77□□□□□ -0.69
PRIM2-202ENST00000370687 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
PRIM2-202ENST00000370687 MAP3K13O43283 966 aa10.75□□□□□ -0.69
PRIM2-202ENST00000370687 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
PRIM2-202ENST00000370687 SNPHO15079 494 aa10.64□□□□□ -0.71
PRIM2-202ENST00000370687 MARVELD3Q96A59 401 aa10.63□□□□□ -0.71
PRIM2-202ENST00000370687 PLCG2P16885 1265 aa10.61□□□□□ -0.71
PRIM2-202ENST00000370687 FKBP8Q14318 412 aa10.59□□□□□ -0.71
PRIM2-202ENST00000370687 SGIP1Q9BQI5 828 aa10.59□□□□□ -0.71
PRIM2-202ENST00000370687 PROM2Q8N271 834 aa10.58□□□□□ -0.72
PRIM2-202ENST00000370687 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
PRIM2-202ENST00000370687 PCDHB13Q9Y5F0 798 aa10.56□□□□□ -0.72
PRIM2-202ENST00000370687 ABCC9O60706 1549 aa10.55□□□□□ -0.72
PRIM2-202ENST00000370687 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
PRIM2-202ENST00000370687 EMP3P54852 163 aa10.51□□□□□ -0.73
PRIM2-202ENST00000370687 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
PRIM2-202ENST00000370687 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
PRIM2-202ENST00000370687 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
PRIM2-202ENST00000370687 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
PRIM2-202ENST00000370687 TMEM106CQ9BVX2 250 aa10.5□□□□□ -0.73
PRIM2-202ENST00000370687 IFNL1Q8IU54 200 aa10.46□□□□□ -0.73
PRIM2-202ENST00000370687 HS3ST6Q96QI5 342 aa10.45□□□□□ -0.74
PRIM2-202ENST00000370687 OCEL1Q9H607 264 aa10.45□□□□□ -0.74
PRIM2-202ENST00000370687 POTEB3A0JP26 581 aa10.42□□□□□ -0.74
PRIM2-202ENST00000370687 POTEBQ6S5H4 581 aa10.42□□□□□ -0.74
PRIM2-202ENST00000370687 FAM205CA6NFA0 338 aa10.41□□□□□ -0.74
PRIM2-202ENST00000370687 MIER1Q8N108 512 aa10.41□□□□□ -0.74
PRIM2-202ENST00000370687 C3orf67Q6ZVT6 689 aa10.33□□□□□ -0.76
PRIM2-202ENST00000370687 RNF166Q96A37 237 aaPredicted RBP10.31□□□□□ -0.76
PRIM2-202ENST00000370687 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
PRIM2-202ENST00000370687 NUBP1P53384 320 aa10.27□□□□□ -0.77
PRIM2-202ENST00000370687 FAM212AQ96EL1 285 aa10.26□□□□□ -0.77
PRIM2-202ENST00000370687 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
PRIM2-202ENST00000370687 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
PRIM2-202ENST00000370687 ZBTB47Q9UFB7 747 aaPredicted RBP10.24□□□□□ -0.77
PRIM2-202ENST00000370687 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
PRIM2-202ENST00000370687 CCDC180Q9P1Z9 1646 aa10.22□□□□□ -0.77
PRIM2-202ENST00000370687 MYT1LQ9UL68 1186 aa10.2□□□□□ -0.78
PRIM2-202ENST00000370687 ERBB3P21860 1342 aa10.14□□□□□ -0.79
PRIM2-202ENST00000370687 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
PRIM2-202ENST00000370687 VASPP50552 380 aaPredicted RBP10.13□□□□□ -0.79
PRIM2-202ENST00000370687 PCDHB8Q9UN66 801 aa10.13□□□□□ -0.79
PRIM2-202ENST00000370687 GOLGA2Q08379 1002 aa10.12□□□□□ -0.79
PRIM2-202ENST00000370687 MKRN3Q13064 507 aaKnown RBP10.12□□□□□ -0.79
PRIM2-202ENST00000370687 HOXB3P14651 431 aaPredicted RBP10.11□□□□□ -0.79
PRIM2-202ENST00000370687 PYGBP11216 843 aa10.1□□□□□ -0.79
PRIM2-202ENST00000370687 ZNF710Q8N1W2 664 aa10.1□□□□□ -0.79
PRIM2-202ENST00000370687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.81e-6■■■■□ 23
PRIM2-202ENST00000370687 PTGER2P43116 358 aa10.07□□□□□ -0.8
PRIM2-202ENST00000370687 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
PRIM2-202ENST00000370687 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
PRIM2-202ENST00000370687 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
PRIM2-202ENST00000370687 G3V3G9 751 aa9.99□□□□□ -0.81
PRIM2-202ENST00000370687 IFNLR1Q8IU57 520 aaPredicted RBP9.99□□□□□ -0.81
PRIM2-202ENST00000370687 RIMBP2O15034 1052 aa9.98□□□□□ -0.81
PRIM2-202ENST00000370687 ZNF467Q7Z7K2 595 aaPredicted RBP9.98□□□□□ -0.81
PRIM2-202ENST00000370687 ZNF687Q8N1G0 1237 aa9.98□□□□□ -0.81
PRIM2-202ENST00000370687 KLHL34Q8N239 644 aa9.98□□□□□ -0.81
PRIM2-202ENST00000370687 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
PRIM2-202ENST00000370687 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.82
PRIM2-202ENST00000370687 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
PRIM2-202ENST00000370687 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
PRIM2-202ENST00000370687 RB1CC1Q8TDY2 1594 aa9.9□□□□□ -0.82
PRIM2-202ENST00000370687 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
PRIM2-202ENST00000370687 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
PRIM2-202ENST00000370687 PSEN1P49768 467 aa9.89□□□□□ -0.83
PRIM2-202ENST00000370687 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
PRIM2-202ENST00000370687 GSE1Q14687 1217 aa9.81□□□□□ -0.84
PRIM2-202ENST00000370687 CHRM1P11229 460 aaPredicted RBP9.8□□□□□ -0.84
PRIM2-202ENST00000370687 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
PRIM2-202ENST00000370687 GPR153Q6NV75 609 aa9.8□□□□□ -0.84
PRIM2-202ENST00000370687 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
PRIM2-202ENST00000370687 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms