RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 DEKP35659 375 aaKnown RBP23.83■■□□□ 1.4
CHRNA4-201ENST00000370263 LAS1LQ9Y4W2 734 aaKnown RBP23.81■■□□□ 1.4
CHRNA4-201ENST00000370263 FBLN2P98095 1184 aa23.81■■□□□ 1.4
CHRNA4-201ENST00000370263 RBM19Q9Y4C8 960 aaKnown RBP23.81■■□□□ 1.4
CHRNA4-201ENST00000370263 TNNT2P45379 298 aaPredicted RBP23.77■■□□□ 1.4
CHRNA4-201ENST00000370263 GOLGA6L22H0YM25 854 aa23.76■■□□□ 1.39
CHRNA4-201ENST00000370263 NAP1L5Q96NT1 182 aaPredicted RBP23.76■■□□□ 1.39
CHRNA4-201ENST00000370263 EEA1Q15075 1411 aa23.7■■□□□ 1.38
CHRNA4-201ENST00000370263 GOLGA3Q08378 1498 aa23.69■■□□□ 1.38
CHRNA4-201ENST00000370263 KDM2AQ9Y2K7 1162 aa23.69■■□□□ 1.38
CHRNA4-201ENST00000370263 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
CHRNA4-201ENST00000370263 MTUS2Q5JR59 1369 aa23.68■■□□□ 1.38
CHRNA4-201ENST00000370263 B4GALNT3Q6L9W6 998 aa23.67■■□□□ 1.38
CHRNA4-201ENST00000370263 MYH16Q9H6N6 1097 aa23.65■■□□□ 1.38
CHRNA4-201ENST00000370263 NCLP19338 710 aaKnown RBP23.64■■□□□ 1.37
CHRNA4-201ENST00000370263 TSHZ2Q9NRE2 1034 aa23.62■■□□□ 1.37
CHRNA4-201ENST00000370263 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
CHRNA4-201ENST00000370263 CHGAP10645 457 aaKnown RBP23.59■■□□□ 1.37
CHRNA4-201ENST00000370263 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.37
CHRNA4-201ENST00000370263 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
CHRNA4-201ENST00000370263 SENP3-EIF4A1A0A087X0R7 540 aa23.56■■□□□ 1.36
CHRNA4-201ENST00000370263 RRP7BPQ9NSQ0 103 aa23.56■■□□□ 1.36
CHRNA4-201ENST00000370263 DNTTIP2Q5QJE6 756 aaKnown RBP23.54■■□□□ 1.36
CHRNA4-201ENST00000370263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.36
CHRNA4-201ENST00000370263 TSPY4P0CV99 314 aa23.51■■□□□ 1.35
CHRNA4-201ENST00000370263 TSPY10P0CW01 314 aa23.51■■□□□ 1.35
CHRNA4-201ENST00000370263 RGS3P49796 1198 aa23.5■■□□□ 1.35
CHRNA4-201ENST00000370263 SIN3AQ96ST3 1273 aa23.5■■□□□ 1.35
CHRNA4-201ENST00000370263 L1TD1Q5T7N2 865 aaKnown RBP23.48■■□□□ 1.35
CHRNA4-201ENST00000370263 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
CHRNA4-201ENST00000370263 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
CHRNA4-201ENST00000370263 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
CHRNA4-201ENST00000370263 FTSJ3Q8IY81 847 aaKnown RBP23.36■■□□□ 1.33
CHRNA4-201ENST00000370263 KNSTRNQ9Y448 316 aa23.36■■□□□ 1.33
CHRNA4-201ENST00000370263 CARD11Q9BXL7 1154 aa23.35■■□□□ 1.33
CHRNA4-201ENST00000370263 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
CHRNA4-201ENST00000370263 CASC1Q6TDU7 716 aa23.35■■□□□ 1.33
CHRNA4-201ENST00000370263 CDCA8Q53HL2 280 aa23.32■■□□□ 1.32
CHRNA4-201ENST00000370263 HSP90AB1P08238 724 aaKnown RBP23.31■■□□□ 1.32
CHRNA4-201ENST00000370263 CFAP53Q96M91 514 aa23.31■■□□□ 1.32
CHRNA4-201ENST00000370263 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.29■■□□□ 1.32
CHRNA4-201ENST00000370263 CDK11BP21127 795 aaKnown RBP23.29■■□□□ 1.32
CHRNA4-201ENST00000370263 CCNB3Q8WWL7 1395 aa23.28■■□□□ 1.32
CHRNA4-201ENST00000370263 MSNP26038 577 aaKnown RBP23.28■■□□□ 1.32
CHRNA4-201ENST00000370263 IPO9Q96P70 1041 aaKnown RBP23.27■■□□□ 1.31
CHRNA4-201ENST00000370263 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
CHRNA4-201ENST00000370263 HSCBQ8IWL3 235 aa23.25■■□□□ 1.31
CHRNA4-201ENST00000370263 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
CHRNA4-201ENST00000370263 FRAT1Q92837 279 aaPredicted RBP23.25■■□□□ 1.31
CHRNA4-201ENST00000370263 ZRSR1Q15695 479 aaKnown RBP23.24■■□□□ 1.31
CHRNA4-201ENST00000370263 RGL3Q3MIN7 710 aa23.24■■□□□ 1.31
CHRNA4-201ENST00000370263 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
CHRNA4-201ENST00000370263 PLCB2Q00722 1185 aa23.21■■□□□ 1.31
CHRNA4-201ENST00000370263 MS4A1P11836 297 aa23.2■■□□□ 1.3
CHRNA4-201ENST00000370263 NEUROD2Q15784 382 aa23.19■■□□□ 1.3
CHRNA4-201ENST00000370263 ESF1Q9H501 851 aaKnown RBP23.19■■□□□ 1.3
CHRNA4-201ENST00000370263 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
CHRNA4-201ENST00000370263 CHAF1AQ13111 956 aaPredicted RBP23.17■■□□□ 1.3
CHRNA4-201ENST00000370263 CHMP4BQ9H444 224 aaKnown RBP23.16■■□□□ 1.3
CHRNA4-201ENST00000370263 CC2D1BQ5T0F9 858 aaKnown RBP23.14■■□□□ 1.29
CHRNA4-201ENST00000370263 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
CHRNA4-201ENST00000370263 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
CHRNA4-201ENST00000370263 SETD5Q9C0A6 1442 aa23.11■■□□□ 1.29
CHRNA4-201ENST00000370263 SPRYD3Q8NCJ5 442 aa23.11■■□□□ 1.29
CHRNA4-201ENST00000370263 MAPK8IP3Q9UPT6 1336 aa23.1■■□□□ 1.29
CHRNA4-201ENST00000370263 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
CHRNA4-201ENST00000370263 USP35Q9P2H5 1018 aa23.09■■□□□ 1.29
CHRNA4-201ENST00000370263 RCAN3Q9UKA8 241 aa23.09■■□□□ 1.29
CHRNA4-201ENST00000370263 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
CHRNA4-201ENST00000370263 GOLGA6L6A8MZA4 724 aa23.08■■□□□ 1.29
CHRNA4-201ENST00000370263 PTMSP20962 102 aa23.07■■□□□ 1.28
CHRNA4-201ENST00000370263 NUDCQ9Y266 331 aa23.06■■□□□ 1.28
CHRNA4-201ENST00000370263 GBP4Q96PP9 640 aa23.05■■□□□ 1.28
CHRNA4-201ENST00000370263 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
CHRNA4-201ENST00000370263 GOLGA6L3A6NEY3 463 aa23.04■■□□□ 1.28
CHRNA4-201ENST00000370263 VPS8Q8N3P4 1428 aa23.04■■□□□ 1.28
CHRNA4-201ENST00000370263 SLKQ9H2G2 1235 aaPredicted RBP23.04■■□□□ 1.28
CHRNA4-201ENST00000370263 NRDCO43847 1150 aa23.04■■□□□ 1.28
CHRNA4-201ENST00000370263 GZF1Q9H116 711 aaPredicted RBP23.04■■□□□ 1.28
CHRNA4-201ENST00000370263 FANCIQ9NVI1 1328 aa23.02■■□□□ 1.28
CHRNA4-201ENST00000370263 RSPH6AQ9H0K4 717 aa23.01■■□□□ 1.27
CHRNA4-201ENST00000370263 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
CHRNA4-201ENST00000370263 TMF1P82094 1093 aa22.99■■□□□ 1.27
CHRNA4-201ENST00000370263 CFAP44Q96MT7 982 aa22.97■■□□□ 1.27
CHRNA4-201ENST00000370263 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
CHRNA4-201ENST00000370263 SOGA1O94964 1423 aa22.96■■□□□ 1.27
CHRNA4-201ENST00000370263 NPM1P06748 294 aaKnown RBP eCLIP22.95■■□□□ 1.26
CHRNA4-201ENST00000370263 GOLGA6L4A6NEF3 574 aa22.94■■□□□ 1.26
CHRNA4-201ENST00000370263 KIAA2012Q0VF49 1180 aa22.94■■□□□ 1.26
CHRNA4-201ENST00000370263 PPP1R15AO75807 674 aaPredicted RBP22.94■■□□□ 1.26
CHRNA4-201ENST00000370263 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
CHRNA4-201ENST00000370263 RAB3GAP2Q9H2M9 1393 aa22.94■■□□□ 1.26
CHRNA4-201ENST00000370263 HSP90AA2PQ14568 343 aaPredicted RBP22.92■■□□□ 1.26
CHRNA4-201ENST00000370263 RALBP1Q15311 655 aa22.91■■□□□ 1.26
CHRNA4-201ENST00000370263 DCAF11Q8TEB1 546 aa22.91■■□□□ 1.26
CHRNA4-201ENST00000370263 GSE1Q14687 1217 aa22.9■■□□□ 1.26
CHRNA4-201ENST00000370263 MCCP23508 829 aa22.89■■□□□ 1.26
CHRNA4-201ENST00000370263 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
CHRNA4-201ENST00000370263 DRC7Q8IY82 874 aa22.88■■□□□ 1.25
CHRNA4-201ENST00000370263 RWDD1Q9H446 243 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms