RNA–Protein interactions for RNA: ENST00000369750.3

TPBG-201, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPBG, Length 6,484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-201ENST00000369750 SOX12O15370 315 aa21.27■■□□□ 1
TPBG-201ENST00000369750 POGKQ9P215 609 aa21.27■■□□□ 1
TPBG-201ENST00000369750 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
TPBG-201ENST00000369750 CFDP1Q9UEE9 299 aaPredicted RBP21.22■□□□□ 0.99
TPBG-201ENST00000369750 CCDC9Q9Y3X0 531 aaKnown RBP21.21■□□□□ 0.99
TPBG-201ENST00000369750 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
TPBG-201ENST00000369750 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
TPBG-201ENST00000369750 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
TPBG-201ENST00000369750 LAS1LQ9Y4W2 734 aaKnown RBP21.17■□□□□ 0.98
TPBG-201ENST00000369750 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
TPBG-201ENST00000369750 TAOK2Q9UL54 1235 aa21.16■□□□□ 0.98
TPBG-201ENST00000369750 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.97
TPBG-201ENST00000369750 MYH16Q9H6N6 1097 aa21.13■□□□□ 0.97
TPBG-201ENST00000369750 TNNT2P45379 298 aaPredicted RBP21.13■□□□□ 0.97
TPBG-201ENST00000369750 SAFB2Q14151 953 aaKnown RBP eCLIP21.1■□□□□ 0.97
TPBG-201ENST00000369750 GGT6Q6P531 493 aa21.09■□□□□ 0.97
TPBG-201ENST00000369750 UPF2Q9HAU5 1272 aaKnown RBP21.06■□□□□ 0.96
TPBG-201ENST00000369750 CDK11BP21127 795 aaKnown RBP21.06■□□□□ 0.96
TPBG-201ENST00000369750 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
TPBG-201ENST00000369750 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
TPBG-201ENST00000369750 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.02■□□□□ 0.96
TPBG-201ENST00000369750 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
TPBG-201ENST00000369750 STK26Q9P289 416 aa21■□□□□ 0.95
TPBG-201ENST00000369750 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
TPBG-201ENST00000369750 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
TPBG-201ENST00000369750 HDGFP51858 240 aaKnown RBP20.98■□□□□ 0.95
TPBG-201ENST00000369750 CFAP53Q96M91 514 aa20.97■□□□□ 0.95
TPBG-201ENST00000369750 MRS2Q9HD23 443 aa20.97■□□□□ 0.95
TPBG-201ENST00000369750 GOLGA2Q08379 1002 aa20.97■□□□□ 0.95
TPBG-201ENST00000369750 CSB-PGBD3P0DP91 1061 aa20.96■□□□□ 0.95
TPBG-201ENST00000369750 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
TPBG-201ENST00000369750 ZNF330Q9Y3S2 320 aaPredicted RBP20.95■□□□□ 0.94
TPBG-201ENST00000369750 TPRNQ4KMQ1 711 aa20.94■□□□□ 0.94
TPBG-201ENST00000369750 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
TPBG-201ENST00000369750 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
TPBG-201ENST00000369750 SRPK2P78362 688 aaKnown RBP20.92■□□□□ 0.94
TPBG-201ENST00000369750 KNSTRNQ9Y448 316 aa20.91■□□□□ 0.94
TPBG-201ENST00000369750 CLIP1P30622 1438 aa20.91■□□□□ 0.94
TPBG-201ENST00000369750 ISY1Q9ULR0 285 aaKnown RBP20.9■□□□□ 0.94
TPBG-201ENST00000369750 KANK1Q14678 1352 aa20.9■□□□□ 0.94
TPBG-201ENST00000369750 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.94
TPBG-201ENST00000369750 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.94
TPBG-201ENST00000369750 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.94
TPBG-201ENST00000369750 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.94
TPBG-201ENST00000369750 FKBP8Q14318 412 aa20.89■□□□□ 0.93
TPBG-201ENST00000369750 CARD11Q9BXL7 1154 aa20.88■□□□□ 0.93
TPBG-201ENST00000369750 MAPK8IP3Q9UPT6 1336 aa20.87■□□□□ 0.93
TPBG-201ENST00000369750 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.86■□□□□ 0.93
TPBG-201ENST00000369750 EIF4G2P78344 907 aaKnown RBP eCLIP20.85■□□□□ 0.93
TPBG-201ENST00000369750 OS9Q13438 667 aaPredicted RBP20.84■□□□□ 0.93
TPBG-201ENST00000369750 IRX6P78412 446 aaPredicted RBP20.83■□□□□ 0.92
TPBG-201ENST00000369750 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
TPBG-201ENST00000369750 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
TPBG-201ENST00000369750 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
TPBG-201ENST00000369750 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
TPBG-201ENST00000369750 NACADO15069 1562 aa20.81■□□□□ 0.92
TPBG-201ENST00000369750 CC2D1BQ5T0F9 858 aaKnown RBP20.8■□□□□ 0.92
TPBG-201ENST00000369750 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
TPBG-201ENST00000369750 CDCA8Q53HL2 280 aa20.79■□□□□ 0.92
TPBG-201ENST00000369750 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
TPBG-201ENST00000369750 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.92
TPBG-201ENST00000369750 NUDCQ9Y266 331 aa20.76■□□□□ 0.91
TPBG-201ENST00000369750 CLSTN1O94985 981 aa20.76■□□□□ 0.91
TPBG-201ENST00000369750 TMX4Q9H1E5 349 aaPredicted RBP20.76■□□□□ 0.91
TPBG-201ENST00000369750 FTSJ3Q8IY81 847 aaKnown RBP20.75■□□□□ 0.91
TPBG-201ENST00000369750 NAP1L2Q9ULW6 460 aaPredicted RBP20.75■□□□□ 0.91
TPBG-201ENST00000369750 NUTM2FA1L443 756 aa20.74■□□□□ 0.91
TPBG-201ENST00000369750 MSH5O43196 834 aa20.73■□□□□ 0.91
TPBG-201ENST00000369750 DCAF11Q8TEB1 546 aa20.71■□□□□ 0.91
TPBG-201ENST00000369750 EID1Q9Y6B2 187 aa20.71■□□□□ 0.91
TPBG-201ENST00000369750 KLHL34Q8N239 644 aa20.69■□□□□ 0.9
TPBG-201ENST00000369750 CUX2O14529 1486 aa20.68■□□□□ 0.9
TPBG-201ENST00000369750 G3V3G9 751 aa20.67■□□□□ 0.9
TPBG-201ENST00000369750 DCAF8Q5TAQ9 597 aa20.67■□□□□ 0.9
TPBG-201ENST00000369750 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
TPBG-201ENST00000369750 FRAT1Q92837 279 aaPredicted RBP20.64■□□□□ 0.9
TPBG-201ENST00000369750 RTF1Q92541 710 aaKnown RBP20.64■□□□□ 0.89
TPBG-201ENST00000369750 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
TPBG-201ENST00000369750 CARMIL2Q6F5E8 1435 aa20.62■□□□□ 0.89
TPBG-201ENST00000369750 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
TPBG-201ENST00000369750 FGD1P98174 961 aa20.61■□□□□ 0.89
TPBG-201ENST00000369750 CASC1Q6TDU7 716 aa20.61■□□□□ 0.89
TPBG-201ENST00000369750 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
TPBG-201ENST00000369750 CARMIL1Q5VZK9 1371 aa20.58■□□□□ 0.89
TPBG-201ENST00000369750 KIF3BO15066 747 aa20.58■□□□□ 0.88
TPBG-201ENST00000369750 KCNJ4P48050 445 aa20.57■□□□□ 0.88
TPBG-201ENST00000369750 EVA1CP58658 441 aa20.57■□□□□ 0.88
TPBG-201ENST00000369750 NGDNQ8NEJ9 315 aaKnown RBP20.57■□□□□ 0.88
TPBG-201ENST00000369750 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
TPBG-201ENST00000369750 ZRSR1Q15695 479 aaKnown RBP20.55■□□□□ 0.88
TPBG-201ENST00000369750 MORC1Q86VD1 984 aa20.55■□□□□ 0.88
TPBG-201ENST00000369750 NCLP19338 710 aaKnown RBP20.55■□□□□ 0.88
TPBG-201ENST00000369750 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
TPBG-201ENST00000369750 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
TPBG-201ENST00000369750 AMER1Q5JTC6 1135 aaPredicted RBP20.53■□□□□ 0.88
TPBG-201ENST00000369750 SOGA1O94964 1423 aa20.53■□□□□ 0.88
TPBG-201ENST00000369750 EFCAB2Q5VUJ9 269 aa20.53■□□□□ 0.88
TPBG-201ENST00000369750 SIN3AQ96ST3 1273 aa20.53■□□□□ 0.88
TPBG-201ENST00000369750 FOXD1Q16676 465 aa20.52■□□□□ 0.88
TPBG-201ENST00000369750 CHMP3Q9Y3E7 222 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms