RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 GOLGA6L22H0YM25 854 aa14.13□□□□□ -0.15
RPRD2-202ENST00000369068 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
RPRD2-202ENST00000369068 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
RPRD2-202ENST00000369068 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
RPRD2-202ENST00000369068 CLIP1P30622 1438 aa14.09□□□□□ -0.15
RPRD2-202ENST00000369068 CHIC2Q9UKJ5 165 aa14.07□□□□□ -0.16
RPRD2-202ENST00000369068 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
RPRD2-202ENST00000369068 FBLN2P98095 1184 aa14.03□□□□□ -0.16
RPRD2-202ENST00000369068 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
RPRD2-202ENST00000369068 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
RPRD2-202ENST00000369068 MYH16Q9H6N6 1097 aa14.03□□□□□ -0.16
RPRD2-202ENST00000369068 B4GALNT3Q6L9W6 998 aa14.02□□□□□ -0.17
RPRD2-202ENST00000369068 PTMAP06454 111 aaKnown RBP14.01□□□□□ -0.17
RPRD2-202ENST00000369068 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
RPRD2-202ENST00000369068 KDM2AQ9Y2K7 1162 aa13.99□□□□□ -0.17
RPRD2-202ENST00000369068 DNTTIP2Q5QJE6 756 aaKnown RBP13.99□□□□□ -0.17
RPRD2-202ENST00000369068 MTUS2Q5JR59 1369 aa13.99□□□□□ -0.17
RPRD2-202ENST00000369068 CCER2I3L3R5 266 aa13.97□□□□□ -0.17
RPRD2-202ENST00000369068 L1TD1Q5T7N2 865 aaKnown RBP13.95□□□□□ -0.18
RPRD2-202ENST00000369068 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
RPRD2-202ENST00000369068 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
RPRD2-202ENST00000369068 TSPY4P0CV99 314 aa13.93□□□□□ -0.18
RPRD2-202ENST00000369068 TSPY10P0CW01 314 aa13.93□□□□□ -0.18
RPRD2-202ENST00000369068 RGS3P49796 1198 aa13.93□□□□□ -0.18
RPRD2-202ENST00000369068 TNIKQ9UKE5 1360 aa13.92□□□□□ -0.18
RPRD2-202ENST00000369068 TIMELESSQ9UNS1 1208 aa13.91□□□□□ -0.18
RPRD2-202ENST00000369068 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
RPRD2-202ENST00000369068 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
RPRD2-202ENST00000369068 CDK11BP21127 795 aaKnown RBP13.88□□□□□ -0.19
RPRD2-202ENST00000369068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.193e-8■□□□□ 8.7
RPRD2-202ENST00000369068 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
RPRD2-202ENST00000369068 SIN3AQ96ST3 1273 aa13.87□□□□□ -0.19
RPRD2-202ENST00000369068 FTSJ3Q8IY81 847 aaKnown RBP13.84□□□□□ -0.19
RPRD2-202ENST00000369068 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
RPRD2-202ENST00000369068 CDCA8Q53HL2 280 aa13.84□□□□□ -0.19
RPRD2-202ENST00000369068 KNSTRNQ9Y448 316 aa13.84□□□□□ -0.19
RPRD2-202ENST00000369068 MSNP26038 577 aaKnown RBP13.83□□□□□ -0.19
RPRD2-202ENST00000369068 PNNQ9H307 717 aaKnown RBP13.83□□□□□ -0.2
RPRD2-202ENST00000369068 NACADO15069 1562 aa13.83□□□□□ -0.2
RPRD2-202ENST00000369068 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
RPRD2-202ENST00000369068 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
RPRD2-202ENST00000369068 ZRSR1Q15695 479 aaKnown RBP13.82□□□□□ -0.2
RPRD2-202ENST00000369068 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
RPRD2-202ENST00000369068 CARD11Q9BXL7 1154 aa13.81□□□□□ -0.2
RPRD2-202ENST00000369068 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
RPRD2-202ENST00000369068 TCERG1O14776 1098 aaKnown RBP13.8□□□□□ -0.2
RPRD2-202ENST00000369068 IPO9Q96P70 1041 aaKnown RBP13.8□□□□□ -0.2
RPRD2-202ENST00000369068 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
RPRD2-202ENST00000369068 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
RPRD2-202ENST00000369068 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
RPRD2-202ENST00000369068 CHAF1AQ13111 956 aaPredicted RBP13.78□□□□□ -0.2
RPRD2-202ENST00000369068 MS4A1P11836 297 aa13.78□□□□□ -0.2
RPRD2-202ENST00000369068 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
RPRD2-202ENST00000369068 FRAT1Q92837 279 aaPredicted RBP13.76□□□□□ -0.21
RPRD2-202ENST00000369068 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
RPRD2-202ENST00000369068 CCNB3Q8WWL7 1395 aa13.75□□□□□ -0.21
RPRD2-202ENST00000369068 USP35Q9P2H5 1018 aa13.74□□□□□ -0.21
RPRD2-202ENST00000369068 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
RPRD2-202ENST00000369068 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
RPRD2-202ENST00000369068 NRDCO43847 1150 aa13.73□□□□□ -0.21
RPRD2-202ENST00000369068 ESF1Q9H501 851 aaKnown RBP13.73□□□□□ -0.21
RPRD2-202ENST00000369068 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
RPRD2-202ENST00000369068 KIF27Q86VH2 1401 aa13.71□□□□□ -0.21
RPRD2-202ENST00000369068 GOLGA6L6A8MZA4 724 aa13.71□□□□□ -0.21
RPRD2-202ENST00000369068 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
RPRD2-202ENST00000369068 PTMSP20962 102 aa13.71□□□□□ -0.21
RPRD2-202ENST00000369068 TPRNQ4KMQ1 711 aa13.7□□□□□ -0.22
RPRD2-202ENST00000369068 GBP4Q96PP9 640 aa13.7□□□□□ -0.22
RPRD2-202ENST00000369068 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
RPRD2-202ENST00000369068 MAPK8IP3Q9UPT6 1336 aa13.68□□□□□ -0.22
RPRD2-202ENST00000369068 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
RPRD2-202ENST00000369068 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
RPRD2-202ENST00000369068 GOLGA6L3A6NEY3 463 aa13.68□□□□□ -0.22
RPRD2-202ENST00000369068 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
RPRD2-202ENST00000369068 FANCIQ9NVI1 1328 aa13.66□□□□□ -0.22
RPRD2-202ENST00000369068 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
RPRD2-202ENST00000369068 SLKQ9H2G2 1235 aaPredicted RBP13.66□□□□□ -0.22
RPRD2-202ENST00000369068 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
RPRD2-202ENST00000369068 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
RPRD2-202ENST00000369068 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
RPRD2-202ENST00000369068 GZF1Q9H116 711 aaPredicted RBP13.65□□□□□ -0.22
RPRD2-202ENST00000369068 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
RPRD2-202ENST00000369068 KIAA2012Q0VF49 1180 aa13.65□□□□□ -0.22
RPRD2-202ENST00000369068 HSP90AA2PQ14568 343 aaPredicted RBP13.64□□□□□ -0.23
RPRD2-202ENST00000369068 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
RPRD2-202ENST00000369068 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
RPRD2-202ENST00000369068 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
RPRD2-202ENST00000369068 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
RPRD2-202ENST00000369068 TMF1P82094 1093 aa13.6□□□□□ -0.23
RPRD2-202ENST00000369068 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
RPRD2-202ENST00000369068 GSE1Q14687 1217 aa13.6□□□□□ -0.23
RPRD2-202ENST00000369068 BAZ1BQ9UIG0 1483 aaKnown RBP13.59□□□□□ -0.23
RPRD2-202ENST00000369068 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
RPRD2-202ENST00000369068 PPP1R15AO75807 674 aaPredicted RBP13.58□□□□□ -0.24
RPRD2-202ENST00000369068 MCCP23508 829 aa13.58□□□□□ -0.24
RPRD2-202ENST00000369068 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
RPRD2-202ENST00000369068 DRC7Q8IY82 874 aa13.57□□□□□ -0.24
RPRD2-202ENST00000369068 VSIG10Q8N0Z9 540 aa13.57□□□□□ -0.24
RPRD2-202ENST00000369068 RWDD1Q9H446 243 aaPredicted RBP13.57□□□□□ -0.24
RPRD2-202ENST00000369068 RALBP1Q15311 655 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms