RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CC2D2AQ9P2K1 1620 aa7.29□□□□□ -1.24
ECHDC1-205ENST00000368295 ZNF692Q9BU19 519 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-205ENST00000368295 RB1CC1Q8TDY2 1594 aa7.28□□□□□ -1.24
ECHDC1-205ENST00000368295 ZRANB1Q9UGI0 708 aa7.25□□□□□ -1.25
ECHDC1-205ENST00000368295 CUX2O14529 1486 aa7.24□□□□□ -1.25
ECHDC1-205ENST00000368295 GALR2O43603 387 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-205ENST00000368295 SCUBE2Q9NQ36 999 aa7.22□□□□□ -1.25
ECHDC1-205ENST00000368295 BICRAQ9NZM4 1560 aa7.2□□□□□ -1.26
ECHDC1-205ENST00000368295 SLC39A7Q92504 469 aa7.19□□□□□ -1.26
ECHDC1-205ENST00000368295 C7P10643 843 aa7.19□□□□□ -1.26
ECHDC1-205ENST00000368295 CCDC180Q9P1Z9 1646 aa7.18□□□□□ -1.26
ECHDC1-205ENST00000368295 METRNQ9UJH8 293 aa7.17□□□□□ -1.26
ECHDC1-205ENST00000368295 UNC13AQ9UPW8 1703 aa7.16□□□□□ -1.26
ECHDC1-205ENST00000368295 PELP1Q8IZL8 1130 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-205ENST00000368295 POTEJP0CG39 1038 aa7.13□□□□□ -1.27
ECHDC1-205ENST00000368295 FKBP8Q14318 412 aa7.13□□□□□ -1.27
ECHDC1-205ENST00000368295 PAK3O75914 559 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-205ENST00000368295 MKRN4PQ13434 485 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-205ENST00000368295 ASTLQ6HA08 431 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-205ENST00000368295 ERCC6Q03468 1493 aa7.08□□□□□ -1.28
ECHDC1-205ENST00000368295 DCAF8L2P0C7V8 631 aa7.08□□□□□ -1.28
ECHDC1-205ENST00000368295 EIF4G1Q04637 1599 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-205ENST00000368295 ATMINO43313 823 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-205ENST00000368295 SPDYE4A6NLX3 237 aa7.04□□□□□ -1.28
ECHDC1-205ENST00000368295 PHF12Q96QT6 1004 aa7.03□□□□□ -1.28
ECHDC1-205ENST00000368295 NACADO15069 1562 aa7.01□□□□□ -1.29
ECHDC1-205ENST00000368295 CREBZFQ9NS37 354 aa6.95□□□□□ -1.3
ECHDC1-205ENST00000368295 ST18O60284 1047 aa6.93□□□□□ -1.3
ECHDC1-205ENST00000368295 MS4A3Q96HJ5 214 aa6.93□□□□□ -1.3
ECHDC1-205ENST00000368295 PROM2Q8N271 834 aa6.93□□□□□ -1.3
ECHDC1-205ENST00000368295 NPM1P06748 294 aaKnown RBP eCLIP6.91□□□□□ -1.3
ECHDC1-205ENST00000368295 TMEM121BQ9BXQ6 578 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-205ENST00000368295 ATN1P54259 1190 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-205ENST00000368295 STAG3Q9UJ98 1225 aa6.89□□□□□ -1.31
ECHDC1-205ENST00000368295 FBXO3Q9UK99 471 aa6.89□□□□□ -1.31
ECHDC1-205ENST00000368295 RIMBP3CA6NJZ7 1639 aa6.87□□□□□ -1.31
ECHDC1-205ENST00000368295 RIMBP3BA6NNM3 1639 aa6.87□□□□□ -1.31
ECHDC1-205ENST00000368295 RIMBP3Q9UFD9 1639 aa6.87□□□□□ -1.31
ECHDC1-205ENST00000368295 POTEFA5A3E0 1075 aa6.86□□□□□ -1.31
ECHDC1-205ENST00000368295 NESP48681 1621 aa6.85□□□□□ -1.31
ECHDC1-205ENST00000368295 CYB5RLQ6IPT4 315 aa6.84□□□□□ -1.32
ECHDC1-205ENST00000368295 SLAIN1Q8ND83 568 aa6.84□□□□□ -1.32
ECHDC1-205ENST00000368295 THOC2Q8NI27 1593 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-205ENST00000368295 SEC24BO95487 1268 aa6.82□□□□□ -1.32
ECHDC1-205ENST00000368295 ILDR2Q71H61 639 aa6.81□□□□□ -1.32
ECHDC1-205ENST00000368295 SNPHO15079 494 aa6.8□□□□□ -1.32
ECHDC1-205ENST00000368295 LMTK3Q96Q04 1460 aa6.8□□□□□ -1.32
ECHDC1-205ENST00000368295 SHROOM4Q9ULL8 1493 aa6.8□□□□□ -1.32
ECHDC1-205ENST00000368295 BAZ1AQ9NRL2 1556 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-205ENST00000368295 BMP2KQ9NSY1 1161 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-205ENST00000368295 SMARCA2P51531 1590 aa6.77□□□□□ -1.33
ECHDC1-205ENST00000368295 TIE1P35590 1138 aa6.77□□□□□ -1.33
ECHDC1-205ENST00000368295 SOCS7O14512 581 aa6.77□□□□□ -1.33
ECHDC1-205ENST00000368295 VASPP50552 380 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-205ENST00000368295 IER5LQ5T953 404 aa6.77□□□□□ -1.33
ECHDC1-205ENST00000368295 ARHGEF11O15085 1522 aa6.76□□□□□ -1.33
ECHDC1-205ENST00000368295 COLQQ9Y215 455 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-205ENST00000368295 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
ECHDC1-205ENST00000368295 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
ECHDC1-205ENST00000368295 SCRIBQ14160 1630 aa6.73□□□□□ -1.33
ECHDC1-205ENST00000368295 AMER1Q5JTC6 1135 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-205ENST00000368295 MNX1P50219 401 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-205ENST00000368295 MARVELD3Q96A59 401 aa6.69□□□□□ -1.34
ECHDC1-205ENST00000368295 KIF12Q96FN5 646 aa6.69□□□□□ -1.34
ECHDC1-205ENST00000368295 KDM4FA0A1W2PPD8 638 aa6.68□□□□□ -1.34
ECHDC1-205ENST00000368295 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
ECHDC1-205ENST00000368295 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
ECHDC1-205ENST00000368295 PLCD3Q8N3E9 789 aa6.68□□□□□ -1.34
ECHDC1-205ENST00000368295 ARAP1Q96P48 1450 aa6.67□□□□□ -1.34
ECHDC1-205ENST00000368295 PLEKHG5O94827 1062 aa6.67□□□□□ -1.34
ECHDC1-205ENST00000368295 FBXO41Q8TF61 875 aa6.67□□□□□ -1.34
ECHDC1-205ENST00000368295 CCDC61Q9Y6R9 512 aa6.67□□□□□ -1.34
ECHDC1-205ENST00000368295 EMP3P54852 163 aa6.66□□□□□ -1.34
ECHDC1-205ENST00000368295 TTLL13PA6NNM8 815 aa6.65□□□□□ -1.34
ECHDC1-205ENST00000368295 MIER1Q8N108 512 aa6.65□□□□□ -1.34
ECHDC1-205ENST00000368295 IFNLR1Q8IU57 520 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-205ENST00000368295 KLHL34Q8N239 644 aa6.63□□□□□ -1.35
ECHDC1-205ENST00000368295 TSPYL2Q9H2G4 693 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-205ENST00000368295 RTN4Q9NQC3 1192 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-205ENST00000368295 KIF21AQ7Z4S6 1674 aa6.63□□□□□ -1.35
ECHDC1-205ENST00000368295 RNF166Q96A37 237 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-205ENST00000368295 ZBTB47Q9UFB7 747 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-205ENST00000368295 PLCG2P16885 1265 aa6.62□□□□□ -1.35
ECHDC1-205ENST00000368295 HS3ST6Q96QI5 342 aa6.62□□□□□ -1.35
ECHDC1-205ENST00000368295 TRPC6Q9Y210 931 aa6.62□□□□□ -1.35
ECHDC1-205ENST00000368295 DISP3Q9P2K9 1392 aa6.61□□□□□ -1.35
ECHDC1-205ENST00000368295 TRIM35Q9UPQ4 493 aa6.61□□□□□ -1.35
ECHDC1-205ENST00000368295 SPOCK2Q92563 424 aa6.6□□□□□ -1.35
ECHDC1-205ENST00000368295 DAXXQ9UER7 740 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-205ENST00000368295 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-205ENST00000368295 MYO15BQ96JP2 1530 aa6.57□□□□□ -1.36
ECHDC1-205ENST00000368295 MAP3K13O43283 966 aa6.57□□□□□ -1.36
ECHDC1-205ENST00000368295 FAM205CA6NFA0 338 aa6.56□□□□□ -1.36
ECHDC1-205ENST00000368295 SGIP1Q9BQI5 828 aa6.55□□□□□ -1.36
ECHDC1-205ENST00000368295 HECW2Q9P2P5 1572 aa6.55□□□□□ -1.36
ECHDC1-205ENST00000368295 POTEB3A0JP26 581 aa6.54□□□□□ -1.36
ECHDC1-205ENST00000368295 POTEBQ6S5H4 581 aa6.54□□□□□ -1.36
ECHDC1-205ENST00000368295 NCAPD3P42695 1498 aa6.53□□□□□ -1.36
ECHDC1-205ENST00000368295 ERCC6L2Q5T890 1561 aa6.53□□□□□ -1.36
ECHDC1-205ENST00000368295 MRC2Q9UBG0 1479 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms