RNA–Protein interactions for RNA: ENST00000366960.7

RPS6KC1-202, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPS6KC1, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-202ENST00000366960 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
RPS6KC1-202ENST00000366960 SUPT16HQ9Y5B9 1047 aaKnown RBP19.03■□□□□ 0.64
RPS6KC1-202ENST00000366960 RGL3Q3MIN7 710 aa19■□□□□ 0.63
RPS6KC1-202ENST00000366960 CEP162Q5TB80 1403 aa19■□□□□ 0.63
RPS6KC1-202ENST00000366960 NPM1P06748 294 aaKnown RBP eCLIP18.96■□□□□ 0.63
RPS6KC1-202ENST00000366960 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
RPS6KC1-202ENST00000366960 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
RPS6KC1-202ENST00000366960 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.62
RPS6KC1-202ENST00000366960 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
RPS6KC1-202ENST00000366960 ANP32EQ9BTT0 268 aa18.88■□□□□ 0.61
RPS6KC1-202ENST00000366960 RSF1Q96T23 1441 aaPredicted RBP18.86■□□□□ 0.61
RPS6KC1-202ENST00000366960 GLIPR1L2Q4G1C9 344 aa18.84■□□□□ 0.61
RPS6KC1-202ENST00000366960 GOLGA3Q08378 1498 aa18.84■□□□□ 0.61
RPS6KC1-202ENST00000366960 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
RPS6KC1-202ENST00000366960 NEUROD2Q15784 382 aa18.83■□□□□ 0.6
RPS6KC1-202ENST00000366960 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
RPS6KC1-202ENST00000366960 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
RPS6KC1-202ENST00000366960 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
RPS6KC1-202ENST00000366960 BECN1Q14457 450 aa18.78■□□□□ 0.6
RPS6KC1-202ENST00000366960 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
RPS6KC1-202ENST00000366960 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
RPS6KC1-202ENST00000366960 RTN4Q9NQC3 1192 aaKnown RBP18.77■□□□□ 0.6
RPS6KC1-202ENST00000366960 RGS3P49796 1198 aa18.77■□□□□ 0.59
RPS6KC1-202ENST00000366960 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
RPS6KC1-202ENST00000366960 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
RPS6KC1-202ENST00000366960 KNSTRNQ9Y448 316 aa18.76■□□□□ 0.59
RPS6KC1-202ENST00000366960 CFDP1Q9UEE9 299 aaPredicted RBP18.75■□□□□ 0.59
RPS6KC1-202ENST00000366960 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
RPS6KC1-202ENST00000366960 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.599e-6■■■■■ 50.1
RPS6KC1-202ENST00000366960 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
RPS6KC1-202ENST00000366960 TPRNQ4KMQ1 711 aa18.73■□□□□ 0.59
RPS6KC1-202ENST00000366960 C14orf37Q86TY3 774 aa18.73■□□□□ 0.59
RPS6KC1-202ENST00000366960 A0A0G2JS52 829 aa18.73■□□□□ 0.59
RPS6KC1-202ENST00000366960 NCLP19338 710 aaKnown RBP18.73■□□□□ 0.59
RPS6KC1-202ENST00000366960 EEA1Q15075 1411 aa18.73■□□□□ 0.59
RPS6KC1-202ENST00000366960 TRIM44Q96DX7 344 aaPredicted RBP18.72■□□□□ 0.59
RPS6KC1-202ENST00000366960 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
RPS6KC1-202ENST00000366960 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
RPS6KC1-202ENST00000366960 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
RPS6KC1-202ENST00000366960 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
RPS6KC1-202ENST00000366960 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
RPS6KC1-202ENST00000366960 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
RPS6KC1-202ENST00000366960 CFAP53Q96M91 514 aa18.66■□□□□ 0.58
RPS6KC1-202ENST00000366960 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.58
RPS6KC1-202ENST00000366960 GOLGA6L22H0YM25 854 aa18.63■□□□□ 0.57
RPS6KC1-202ENST00000366960 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
RPS6KC1-202ENST00000366960 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
RPS6KC1-202ENST00000366960 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
RPS6KC1-202ENST00000366960 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.56
RPS6KC1-202ENST00000366960 PTMAP06454 111 aaKnown RBP18.56■□□□□ 0.56
RPS6KC1-202ENST00000366960 RBM19Q9Y4C8 960 aaKnown RBP18.56■□□□□ 0.56
RPS6KC1-202ENST00000366960 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
RPS6KC1-202ENST00000366960 MAPK8IP3Q9UPT6 1336 aa18.54■□□□□ 0.56
RPS6KC1-202ENST00000366960 SOGA1O94964 1423 aa18.54■□□□□ 0.56
RPS6KC1-202ENST00000366960 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
RPS6KC1-202ENST00000366960 FOXD1Q16676 465 aa18.52■□□□□ 0.55
RPS6KC1-202ENST00000366960 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
RPS6KC1-202ENST00000366960 DNTTIP2Q5QJE6 756 aaKnown RBP18.51■□□□□ 0.55
RPS6KC1-202ENST00000366960 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
RPS6KC1-202ENST00000366960 NAP1L5Q96NT1 182 aaPredicted RBP18.5■□□□□ 0.55
RPS6KC1-202ENST00000366960 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
RPS6KC1-202ENST00000366960 PLCB2Q00722 1185 aa18.49■□□□□ 0.55
RPS6KC1-202ENST00000366960 TAOK2Q9UL54 1235 aa18.49■□□□□ 0.55
RPS6KC1-202ENST00000366960 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
RPS6KC1-202ENST00000366960 POGKQ9P215 609 aa18.48■□□□□ 0.55
RPS6KC1-202ENST00000366960 SPRYD3Q8NCJ5 442 aa18.47■□□□□ 0.55
RPS6KC1-202ENST00000366960 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
RPS6KC1-202ENST00000366960 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
RPS6KC1-202ENST00000366960 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
RPS6KC1-202ENST00000366960 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
RPS6KC1-202ENST00000366960 HSP90AB1P08238 724 aaKnown RBP18.43■□□□□ 0.54
RPS6KC1-202ENST00000366960 ARID4BQ4LE39 1312 aaPredicted RBP18.43■□□□□ 0.54
RPS6KC1-202ENST00000366960 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
RPS6KC1-202ENST00000366960 LMOD2Q6P5Q4 547 aa18.43■□□□□ 0.54
RPS6KC1-202ENST00000366960 TMF1P82094 1093 aa18.42■□□□□ 0.54
RPS6KC1-202ENST00000366960 ZRSR1Q15695 479 aaKnown RBP18.41■□□□□ 0.54
RPS6KC1-202ENST00000366960 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.543e-6■■■□□ 17.5
RPS6KC1-202ENST00000366960 SOX12O15370 315 aa18.4■□□□□ 0.54
RPS6KC1-202ENST00000366960 CDK11BP21127 795 aaKnown RBP18.39■□□□□ 0.53
RPS6KC1-202ENST00000366960 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
RPS6KC1-202ENST00000366960 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
RPS6KC1-202ENST00000366960 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
RPS6KC1-202ENST00000366960 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
RPS6KC1-202ENST00000366960 PKD2Q13563 968 aa18.36■□□□□ 0.53
RPS6KC1-202ENST00000366960 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
RPS6KC1-202ENST00000366960 OS9Q13438 667 aaPredicted RBP18.34■□□□□ 0.53
RPS6KC1-202ENST00000366960 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.53
RPS6KC1-202ENST00000366960 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.52
RPS6KC1-202ENST00000366960 MORC1Q86VD1 984 aa18.33■□□□□ 0.52
RPS6KC1-202ENST00000366960 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
RPS6KC1-202ENST00000366960 APBB1O00213 710 aa18.31■□□□□ 0.52
RPS6KC1-202ENST00000366960 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
RPS6KC1-202ENST00000366960 KCNJ4P48050 445 aa18.31■□□□□ 0.52
RPS6KC1-202ENST00000366960 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
RPS6KC1-202ENST00000366960 CUX2O14529 1486 aa18.31■□□□□ 0.52
RPS6KC1-202ENST00000366960 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
RPS6KC1-202ENST00000366960 FGD1P98174 961 aa18.31■□□□□ 0.52
RPS6KC1-202ENST00000366960 MS4A1P11836 297 aa18.3■□□□□ 0.52
RPS6KC1-202ENST00000366960 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
RPS6KC1-202ENST00000366960 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms