RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
RNU4-40P-201ENST00000364351 ZBTB47Q9UFB7 747 aaPredicted RBP16.57■□□□□ 0.24
RNU4-40P-201ENST00000364351 KIF12Q96FN5 646 aa16.52■□□□□ 0.24
RNU4-40P-201ENST00000364351 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
RNU4-40P-201ENST00000364351 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
RNU4-40P-201ENST00000364351 NUBP1P53384 320 aa16.47■□□□□ 0.23
RNU4-40P-201ENST00000364351 MAP3K13O43283 966 aa16.46■□□□□ 0.23
RNU4-40P-201ENST00000364351 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
RNU4-40P-201ENST00000364351 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
RNU4-40P-201ENST00000364351 FAM212AQ96EL1 285 aa16.37■□□□□ 0.21
RNU4-40P-201ENST00000364351 TRPC6Q9Y210 931 aa16.37■□□□□ 0.21
RNU4-40P-201ENST00000364351 POTEB2H3BUK9 544 aa16.35■□□□□ 0.21
RNU4-40P-201ENST00000364351 ATN1P54259 1190 aaPredicted RBP16.34■□□□□ 0.21
RNU4-40P-201ENST00000364351 SLC39A7Q92504 469 aa16.34■□□□□ 0.21
RNU4-40P-201ENST00000364351 METRNQ9UJH8 293 aa16.34■□□□□ 0.21
RNU4-40P-201ENST00000364351 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
RNU4-40P-201ENST00000364351 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
RNU4-40P-201ENST00000364351 C7P10643 843 aa16.31■□□□□ 0.2
RNU4-40P-201ENST00000364351 PCDHB13Q9Y5F0 798 aa16.31■□□□□ 0.2
RNU4-40P-201ENST00000364351 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
RNU4-40P-201ENST00000364351 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
RNU4-40P-201ENST00000364351 TIE1P35590 1138 aa16.28■□□□□ 0.2
RNU4-40P-201ENST00000364351 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.2
RNU4-40P-201ENST00000364351 OTUD5Q96G74 571 aa16.25■□□□□ 0.19
RNU4-40P-201ENST00000364351 TTLL13PA6NNM8 815 aa16.21■□□□□ 0.19
RNU4-40P-201ENST00000364351 IFNL1Q8IU54 200 aa16.21■□□□□ 0.19
RNU4-40P-201ENST00000364351 PYGBP11216 843 aa16.18■□□□□ 0.18
RNU4-40P-201ENST00000364351 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
RNU4-40P-201ENST00000364351 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
RNU4-40P-201ENST00000364351 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
RNU4-40P-201ENST00000364351 TMEM106CQ9BVX2 250 aa16.1■□□□□ 0.17
RNU4-40P-201ENST00000364351 SEC24BO95487 1268 aa16.08■□□□□ 0.16
RNU4-40P-201ENST00000364351 GSE1Q14687 1217 aa16.08■□□□□ 0.16
RNU4-40P-201ENST00000364351 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
RNU4-40P-201ENST00000364351 COLQQ9Y215 455 aaPredicted RBP16.05■□□□□ 0.16
RNU4-40P-201ENST00000364351 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
RNU4-40P-201ENST00000364351 PCDHB8Q9UN66 801 aa16.04■□□□□ 0.16
RNU4-40P-201ENST00000364351 IER5LQ5T953 404 aa16.01■□□□□ 0.15
RNU4-40P-201ENST00000364351 SCUBE2Q9NQ36 999 aa16■□□□□ 0.15
RNU4-40P-201ENST00000364351 SPOCK2Q92563 424 aa15.99■□□□□ 0.15
RNU4-40P-201ENST00000364351 CIZ1Q9ULV3 898 aaPredicted RBP15.93■□□□□ 0.14
RNU4-40P-201ENST00000364351 CHRM1P11229 460 aaPredicted RBP15.91■□□□□ 0.14
RNU4-40P-201ENST00000364351 ZNF467Q7Z7K2 595 aaPredicted RBP15.91■□□□□ 0.14
RNU4-40P-201ENST00000364351 PLCG2P16885 1265 aa15.89■□□□□ 0.13
RNU4-40P-201ENST00000364351 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
RNU4-40P-201ENST00000364351 OCEL1Q9H607 264 aa15.8■□□□□ 0.12
RNU4-40P-201ENST00000364351 PSEN1P49768 467 aa15.79■□□□□ 0.12
RNU4-40P-201ENST00000364351 FAM163AQ96GL9 167 aaPredicted RBP15.78■□□□□ 0.12
RNU4-40P-201ENST00000364351 POTEMA6NI47 508 aa15.77■□□□□ 0.12
RNU4-40P-201ENST00000364351 GOLGA2Q08379 1002 aa15.77■□□□□ 0.12
RNU4-40P-201ENST00000364351 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
RNU4-40P-201ENST00000364351 POTEGQ6S5H5 508 aa15.74■□□□□ 0.11
RNU4-40P-201ENST00000364351 PDAP1Q13442 181 aaKnown RBP15.72■□□□□ 0.11
RNU4-40P-201ENST00000364351 SLAIN1Q8ND83 568 aa15.71■□□□□ 0.11
RNU4-40P-201ENST00000364351 LCE2DQ5TA82 110 aaPredicted RBP15.66■□□□□ 0.1
RNU4-40P-201ENST00000364351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.64■□□□□ 0.09
RNU4-40P-201ENST00000364351 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
RNU4-40P-201ENST00000364351 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
RNU4-40P-201ENST00000364351 CABP2Q9NPB3 220 aa15.61■□□□□ 0.09
RNU4-40P-201ENST00000364351 PLSCR2Q9NRY7 297 aa15.61■□□□□ 0.09
RNU4-40P-201ENST00000364351 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.59■□□□□ 0.09
RNU4-40P-201ENST00000364351 L3MBTL3Q96JM7 780 aaPredicted RBP15.55■□□□□ 0.08
RNU4-40P-201ENST00000364351 C3orf67Q6ZVT6 689 aa15.51■□□□□ 0.07
RNU4-40P-201ENST00000364351 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
RNU4-40P-201ENST00000364351 ILDR1Q86SU0 546 aaPredicted RBP15.48■□□□□ 0.07
RNU4-40P-201ENST00000364351 PCDH10Q9P2E7 1040 aa15.47■□□□□ 0.07
RNU4-40P-201ENST00000364351 ST18O60284 1047 aa15.46■□□□□ 0.07
RNU4-40P-201ENST00000364351 RIOK3O14730 519 aaKnown RBP15.45■□□□□ 0.06
RNU4-40P-201ENST00000364351 EFCAB3Q8N7B9 438 aa15.44■□□□□ 0.06
RNU4-40P-201ENST00000364351 RNF25Q96BH1 459 aaPredicted RBP15.44■□□□□ 0.06
RNU4-40P-201ENST00000364351 G3V3G9 751 aa15.41■□□□□ 0.06
RNU4-40P-201ENST00000364351 SNPHO15079 494 aa15.41■□□□□ 0.06
RNU4-40P-201ENST00000364351 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.38■□□□□ 0.05
RNU4-40P-201ENST00000364351 ZFP91Q96JP5 570 aaPredicted RBP15.38■□□□□ 0.05
RNU4-40P-201ENST00000364351 BOLA1Q9Y3E2 137 aa15.38■□□□□ 0.05
RNU4-40P-201ENST00000364351 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
RNU4-40P-201ENST00000364351 CDAN1Q8IWY9 1227 aa15.31■□□□□ 0.04
RNU4-40P-201ENST00000364351 TMEM121BQ9BXQ6 578 aaPredicted RBP15.29■□□□□ 0.04
RNU4-40P-201ENST00000364351 SOX12O15370 315 aa15.27■□□□□ 0.04
RNU4-40P-201ENST00000364351 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
RNU4-40P-201ENST00000364351 MARVELD3Q96A59 401 aa15.26■□□□□ 0.03
RNU4-40P-201ENST00000364351 TAOK2Q9UL54 1235 aa15.24■□□□□ 0.03
RNU4-40P-201ENST00000364351 PHF8Q9UPP1 1060 aa15.23■□□□□ 0.03
RNU4-40P-201ENST00000364351 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
RNU4-40P-201ENST00000364351 MS4A4AQ96JQ5 239 aa15.19■□□□□ 0.02
RNU4-40P-201ENST00000364351 STK24Q9Y6E0 443 aa15.19■□□□□ 0.02
RNU4-40P-201ENST00000364351 PKD2Q13563 968 aa15.17■□□□□ 0.02
RNU4-40P-201ENST00000364351 MICALL2Q8IY33 904 aa15.17■□□□□ 0.02
RNU4-40P-201ENST00000364351 STK25O00506 426 aa15.14■□□□□ 0.01
RNU4-40P-201ENST00000364351 EMP3P54852 163 aa15.14■□□□□ 0.01
RNU4-40P-201ENST00000364351 RGL2O15211 777 aa15.12■□□□□ 0.01
RNU4-40P-201ENST00000364351 NLRP6P59044 892 aa15.12■□□□□ 0.01
RNU4-40P-201ENST00000364351 HOXB3P14651 431 aaPredicted RBP15.11■□□□□ 0.01
RNU4-40P-201ENST00000364351 TMEM92Q6UXU6 159 aa15.08■□□□□ 0
RNU4-40P-201ENST00000364351 ZNF710Q8N1W2 664 aa15.08■□□□□ 0
RNU4-40P-201ENST00000364351 FAM205CA6NFA0 338 aa15.06■□□□□ 0
RNU4-40P-201ENST00000364351 FBXO22Q8NEZ5 403 aa15.06■□□□□ 0
RNU4-40P-201ENST00000364351 DOK7Q18PE1 504 aa15.05■□□□□ -0
RNU4-40P-201ENST00000364351 MFRPQ9BY79 579 aa15.04■□□□□ -0
RNU4-40P-201ENST00000364351 HS3ST6Q96QI5 342 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms