RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 MS4A3Q96HJ5 214 aa6.63□□□□□ -1.35
RNU6-1048P-201ENST00000364054 METRNQ9UJH8 293 aa6.59□□□□□ -1.35
RNU6-1048P-201ENST00000364054 CCDC61Q9Y6R9 512 aa6.58□□□□□ -1.36
RNU6-1048P-201ENST00000364054 SLC39A7Q92504 469 aa6.57□□□□□ -1.36
RNU6-1048P-201ENST00000364054 ATMINO43313 823 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1048P-201ENST00000364054 RASEFQ8IZ41 740 aa6.56□□□□□ -1.36
RNU6-1048P-201ENST00000364054 PELP1Q8IZL8 1130 aaKnown RBP6.56□□□□□ -1.36
RNU6-1048P-201ENST00000364054 C7P10643 843 aa6.55□□□□□ -1.36
RNU6-1048P-201ENST00000364054 ASTLQ6HA08 431 aaPredicted RBP6.55□□□□□ -1.36
RNU6-1048P-201ENST00000364054 KIF12Q96FN5 646 aa6.55□□□□□ -1.36
RNU6-1048P-201ENST00000364054 FAM212AQ96EL1 285 aa6.54□□□□□ -1.36
RNU6-1048P-201ENST00000364054 MAP3K13O43283 966 aa6.53□□□□□ -1.36
RNU6-1048P-201ENST00000364054 OTUD5Q96G74 571 aa6.53□□□□□ -1.36
RNU6-1048P-201ENST00000364054 SGIP1Q9BQI5 828 aa6.53□□□□□ -1.36
RNU6-1048P-201ENST00000364054 MAMSTRQ6ZN01 415 aa6.52□□□□□ -1.37
RNU6-1048P-201ENST00000364054 ATN1P54259 1190 aaPredicted RBP6.51□□□□□ -1.37
RNU6-1048P-201ENST00000364054 PCDHB13Q9Y5F0 798 aa6.51□□□□□ -1.37
RNU6-1048P-201ENST00000364054 POTEB2H3BUK9 544 aa6.5□□□□□ -1.37
RNU6-1048P-201ENST00000364054 SEC24BO95487 1268 aa6.5□□□□□ -1.37
RNU6-1048P-201ENST00000364054 BMP2KQ9NSY1 1161 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1048P-201ENST00000364054 SCUBE2Q9NQ36 999 aa6.49□□□□□ -1.37
RNU6-1048P-201ENST00000364054 PLSCR2Q9NRY7 297 aa6.49□□□□□ -1.37
RNU6-1048P-201ENST00000364054 TIE1P35590 1138 aa6.48□□□□□ -1.37
RNU6-1048P-201ENST00000364054 KLHL34Q8N239 644 aa6.47□□□□□ -1.37
RNU6-1048P-201ENST00000364054 TRPC6Q9Y210 931 aa6.47□□□□□ -1.37
RNU6-1048P-201ENST00000364054 NUBP1P53384 320 aa6.46□□□□□ -1.38
RNU6-1048P-201ENST00000364054 DCAF8Q5TAQ9 597 aa6.46□□□□□ -1.38
RNU6-1048P-201ENST00000364054 TTLL13PA6NNM8 815 aa6.45□□□□□ -1.38
RNU6-1048P-201ENST00000364054 VASPP50552 380 aaPredicted RBP6.44□□□□□ -1.38
RNU6-1048P-201ENST00000364054 GSE1Q14687 1217 aa6.44□□□□□ -1.38
RNU6-1048P-201ENST00000364054 TMEM106CQ9BVX2 250 aa6.43□□□□□ -1.38
RNU6-1048P-201ENST00000364054 TRIM35Q9UPQ4 493 aa6.43□□□□□ -1.38
RNU6-1048P-201ENST00000364054 POTEMA6NI47 508 aa6.42□□□□□ -1.38
RNU6-1048P-201ENST00000364054 IFNL1Q8IU54 200 aa6.42□□□□□ -1.38
RNU6-1048P-201ENST00000364054 IER5LQ5T953 404 aa6.41□□□□□ -1.38
RNU6-1048P-201ENST00000364054 POTEGQ6S5H5 508 aa6.41□□□□□ -1.38
RNU6-1048P-201ENST00000364054 FAM163AQ96GL9 167 aaPredicted RBP6.41□□□□□ -1.38
RNU6-1048P-201ENST00000364054 POTEJP0CG39 1038 aa6.4□□□□□ -1.38
RNU6-1048P-201ENST00000364054 PYGBP11216 843 aa6.4□□□□□ -1.38
RNU6-1048P-201ENST00000364054 PLCG2P16885 1265 aa6.4□□□□□ -1.38
RNU6-1048P-201ENST00000364054 COLQQ9Y215 455 aaPredicted RBP6.39□□□□□ -1.39
RNU6-1048P-201ENST00000364054 ZNF467Q7Z7K2 595 aaPredicted RBP6.37□□□□□ -1.39
RNU6-1048P-201ENST00000364054 POTEFA5A3E0 1075 aa6.36□□□□□ -1.39
RNU6-1048P-201ENST00000364054 GOLGA2Q08379 1002 aa6.36□□□□□ -1.39
RNU6-1048P-201ENST00000364054 SPOCK2Q92563 424 aa6.35□□□□□ -1.39
RNU6-1048P-201ENST00000364054 PCDHB8Q9UN66 801 aa6.35□□□□□ -1.39
RNU6-1048P-201ENST00000364054 CHRM1P11229 460 aaPredicted RBP6.34□□□□□ -1.39
RNU6-1048P-201ENST00000364054 SLAIN1Q8ND83 568 aa6.34□□□□□ -1.39
RNU6-1048P-201ENST00000364054 TRIM41Q8WV44 630 aa6.32□□□□□ -1.4
RNU6-1048P-201ENST00000364054 PCDH10Q9P2E7 1040 aa6.31□□□□□ -1.4
RNU6-1048P-201ENST00000364054 MKRN3Q13064 507 aaKnown RBP6.3□□□□□ -1.4
RNU6-1048P-201ENST00000364054 OCEL1Q9H607 264 aa6.3□□□□□ -1.4
RNU6-1048P-201ENST00000364054 CIZ1Q9ULV3 898 aaPredicted RBP6.3□□□□□ -1.4
RNU6-1048P-201ENST00000364054 IRX5P78411 483 aaPredicted RBP6.28□□□□□ -1.4
RNU6-1048P-201ENST00000364054 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.27□□□□□ -1.41
RNU6-1048P-201ENST00000364054 PSEN1P49768 467 aa6.26□□□□□ -1.41
RNU6-1048P-201ENST00000364054 C3orf67Q6ZVT6 689 aa6.26□□□□□ -1.41
RNU6-1048P-201ENST00000364054 IFNLR1Q8IU57 520 aaPredicted RBP6.26□□□□□ -1.41
RNU6-1048P-201ENST00000364054 G3V3G9 751 aa6.25□□□□□ -1.41
RNU6-1048P-201ENST00000364054 PDAP1Q13442 181 aaKnown RBP6.25□□□□□ -1.41
RNU6-1048P-201ENST00000364054 SNPHO15079 494 aa6.24□□□□□ -1.41
RNU6-1048P-201ENST00000364054 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
RNU6-1048P-201ENST00000364054 L3MBTL3Q96JM7 780 aaPredicted RBP6.24□□□□□ -1.41
RNU6-1048P-201ENST00000364054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU6-1048P-201ENST00000364054 TAOK2Q9UL54 1235 aa6.22□□□□□ -1.41
RNU6-1048P-201ENST00000364054 ST18O60284 1047 aa6.21□□□□□ -1.42
RNU6-1048P-201ENST00000364054 CDAN1Q8IWY9 1227 aa6.21□□□□□ -1.42
RNU6-1048P-201ENST00000364054 CABP2Q9NPB3 220 aa6.2□□□□□ -1.42
RNU6-1048P-201ENST00000364054 PDCD7Q8N8D1 485 aaKnown RBP6.19□□□□□ -1.42
RNU6-1048P-201ENST00000364054 TMEM121BQ9BXQ6 578 aaPredicted RBP6.17□□□□□ -1.42
RNU6-1048P-201ENST00000364054 MARVELD3Q96A59 401 aa6.16□□□□□ -1.42
RNU6-1048P-201ENST00000364054 EMP3P54852 163 aa6.15□□□□□ -1.42
RNU6-1048P-201ENST00000364054 RIOK3O14730 519 aaKnown RBP6.13□□□□□ -1.43
RNU6-1048P-201ENST00000364054 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
RNU6-1048P-201ENST00000364054 VGFO15240 615 aaPredicted RBP6.12□□□□□ -1.43
RNU6-1048P-201ENST00000364054 DPY19L2Q6NUT2 758 aa6.11□□□□□ -1.43
RNU6-1048P-201ENST00000364054 SOX12O15370 315 aa6.1□□□□□ -1.43
RNU6-1048P-201ENST00000364054 ILDR1Q86SU0 546 aaPredicted RBP6.1□□□□□ -1.43
RNU6-1048P-201ENST00000364054 ZNF710Q8N1W2 664 aa6.1□□□□□ -1.43
RNU6-1048P-201ENST00000364054 FAM205CA6NFA0 338 aa6.07□□□□□ -1.44
RNU6-1048P-201ENST00000364054 EFCAB3Q8N7B9 438 aa6.07□□□□□ -1.44
RNU6-1048P-201ENST00000364054 RIMBP2O15034 1052 aa6.06□□□□□ -1.44
RNU6-1048P-201ENST00000364054 DOK7Q18PE1 504 aa6.05□□□□□ -1.44
RNU6-1048P-201ENST00000364054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.04□□□□□ -1.44
RNU6-1048P-201ENST00000364054 ZFP91Q96JP5 570 aaPredicted RBP6.04□□□□□ -1.44
RNU6-1048P-201ENST00000364054 HS3ST6Q96QI5 342 aa6.04□□□□□ -1.44
RNU6-1048P-201ENST00000364054 ECM2O94769 699 aaPredicted RBP6.03□□□□□ -1.44
RNU6-1048P-201ENST00000364054 NLRP6P59044 892 aa6.03□□□□□ -1.44
RNU6-1048P-201ENST00000364054 SPNS2Q8IVW8 549 aa6.03□□□□□ -1.44
RNU6-1048P-201ENST00000364054 MMRN1Q13201 1228 aa6.02□□□□□ -1.45
RNU6-1048P-201ENST00000364054 ERBB3P21860 1342 aa6.01□□□□□ -1.45
RNU6-1048P-201ENST00000364054 MICALL2Q8IY33 904 aa6.01□□□□□ -1.45
RNU6-1048P-201ENST00000364054 PHF8Q9UPP1 1060 aa6□□□□□ -1.45
RNU6-1048P-201ENST00000364054 STK25O00506 426 aa5.99□□□□□ -1.45
RNU6-1048P-201ENST00000364054 HOXB3P14651 431 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1048P-201ENST00000364054 RNF25Q96BH1 459 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1048P-201ENST00000364054 BCL11BQ9C0K0 894 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1048P-201ENST00000364054 STK24Q9Y6E0 443 aa5.99□□□□□ -1.45
RNU6-1048P-201ENST00000364054 ZSWIM6Q9HCJ5 1215 aa5.98□□□□□ -1.45
RNU6-1048P-201ENST00000364054 HOXB1P14653 301 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms