RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
RNU6-340P-201ENST00000364005 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
RNU6-340P-201ENST00000364005 MKRN4PQ13434 485 aaPredicted RBP4.1□□□□□ -1.75
RNU6-340P-201ENST00000364005 POTEFA5A3E0 1075 aa4.09□□□□□ -1.75
RNU6-340P-201ENST00000364005 PAK3O75914 559 aaPredicted RBP4.09□□□□□ -1.75
RNU6-340P-201ENST00000364005 MS4A3Q96HJ5 214 aa4.08□□□□□ -1.76
RNU6-340P-201ENST00000364005 ATN1P54259 1190 aaPredicted RBP4.07□□□□□ -1.76
RNU6-340P-201ENST00000364005 CREBZFQ9NS37 354 aa4.05□□□□□ -1.76
RNU6-340P-201ENST00000364005 SLAIN1Q8ND83 568 aa4.04□□□□□ -1.76
RNU6-340P-201ENST00000364005 MARVELD3Q96A59 401 aa4.02□□□□□ -1.77
RNU6-340P-201ENST00000364005 TMEM121BQ9BXQ6 578 aaPredicted RBP4.02□□□□□ -1.77
RNU6-340P-201ENST00000364005 FOXD4L1Q9NU39 408 aa4.02□□□□□ -1.77
RNU6-340P-201ENST00000364005 COLQQ9Y215 455 aaPredicted RBP4.01□□□□□ -1.77
RNU6-340P-201ENST00000364005 SEC24BO95487 1268 aa4□□□□□ -1.77
RNU6-340P-201ENST00000364005 KRTAP3-3Q9BYR6 98 aa3.99□□□□□ -1.77
RNU6-340P-201ENST00000364005 KRTAP3-2Q9BYR7 98 aa3.99□□□□□ -1.77
RNU6-340P-201ENST00000364005 BMP2KQ9NSY1 1161 aaPredicted RBP3.97□□□□□ -1.77
RNU6-340P-201ENST00000364005 POTEB3A0JP26 581 aa3.95□□□□□ -1.78
RNU6-340P-201ENST00000364005 NPM1P06748 294 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-340P-201ENST00000364005 POTEBQ6S5H4 581 aa3.95□□□□□ -1.78
RNU6-340P-201ENST00000364005 ATXN8OSP0DMR3 200 aa3.94□□□□□ -1.78
RNU6-340P-201ENST00000364005 SNPHO15079 494 aa3.93□□□□□ -1.78
RNU6-340P-201ENST00000364005 TRPC6Q9Y210 931 aa3.93□□□□□ -1.78
RNU6-340P-201ENST00000364005 EMP3P54852 163 aa3.92□□□□□ -1.78
RNU6-340P-201ENST00000364005 RNF166Q96A37 237 aaPredicted RBP3.92□□□□□ -1.78
RNU6-340P-201ENST00000364005 HS3ST6Q96QI5 342 aa3.92□□□□□ -1.78
RNU6-340P-201ENST00000364005 MNX1P50219 401 aaPredicted RBP3.91□□□□□ -1.78
RNU6-340P-201ENST00000364005 FAM205CA6NFA0 338 aa3.9□□□□□ -1.79
RNU6-340P-201ENST00000364005 TIE1P35590 1138 aa3.9□□□□□ -1.79
RNU6-340P-201ENST00000364005 KIF12Q96FN5 646 aa3.9□□□□□ -1.79
RNU6-340P-201ENST00000364005 TTLL13PA6NNM8 815 aa3.89□□□□□ -1.79
RNU6-340P-201ENST00000364005 IER5LQ5T953 404 aa3.89□□□□□ -1.79
RNU6-340P-201ENST00000364005 TSPYL2Q9H2G4 693 aaPredicted RBP3.89□□□□□ -1.79
RNU6-340P-201ENST00000364005 STAG3Q9UJ98 1225 aa3.88□□□□□ -1.79
RNU6-340P-201ENST00000364005 CCDC61Q9Y6R9 512 aa3.87□□□□□ -1.79
RNU6-340P-201ENST00000364005 TRIM35Q9UPQ4 493 aa3.86□□□□□ -1.79
RNU6-340P-201ENST00000364005 MYT1LQ9UL68 1186 aa3.85□□□□□ -1.79
RNU6-340P-201ENST00000364005 MAP3K13O43283 966 aa3.84□□□□□ -1.79
RNU6-340P-201ENST00000364005 PLCG2P16885 1265 aa3.83□□□□□ -1.8
RNU6-340P-201ENST00000364005 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.83□□□□□ -1.8
RNU6-340P-201ENST00000364005 ZBTB22O15209 634 aa3.81□□□□□ -1.8
RNU6-340P-201ENST00000364005 SLC4A1APQ9BWU0 796 aaKnown RBP3.8□□□□□ -1.8
RNU6-340P-201ENST00000364005 IRX5P78411 483 aaPredicted RBP3.79□□□□□ -1.8
RNU6-340P-201ENST00000364005 PLA2G2EQ9NZK7 142 aa3.78□□□□□ -1.8
RNU6-340P-201ENST00000364005 OCEL1Q9H607 264 aa3.76□□□□□ -1.81
RNU6-340P-201ENST00000364005 ERBB3P21860 1342 aa3.74□□□□□ -1.81
RNU6-340P-201ENST00000364005 TMEM106CQ9BVX2 250 aa3.74□□□□□ -1.81
RNU6-340P-201ENST00000364005 PTGER2P43116 358 aa3.73□□□□□ -1.81
RNU6-340P-201ENST00000364005 PCDHB13Q9Y5F0 798 aa3.73□□□□□ -1.81
RNU6-340P-201ENST00000364005 C3orf67Q6ZVT6 689 aa3.72□□□□□ -1.81
RNU6-340P-201ENST00000364005 SGIP1Q9BQI5 828 aa3.72□□□□□ -1.81
RNU6-340P-201ENST00000364005 HOXB1P14653 301 aaPredicted RBP3.7□□□□□ -1.82
RNU6-340P-201ENST00000364005 IRX2Q9BZI1 471 aaPredicted RBP3.7□□□□□ -1.82
RNU6-340P-201ENST00000364005 VARS2Q5ST30 1063 aaKnown RBP3.69□□□□□ -1.82
RNU6-340P-201ENST00000364005 IFNL1Q8IU54 200 aa3.69□□□□□ -1.82
RNU6-340P-201ENST00000364005 HOXB3P14651 431 aaPredicted RBP3.68□□□□□ -1.82
RNU6-340P-201ENST00000364005 ANKRD13DQ6ZTN6 518 aa3.68□□□□□ -1.82
RNU6-340P-201ENST00000364005 RASEFQ8IZ41 740 aa3.68□□□□□ -1.82
RNU6-340P-201ENST00000364005 ZNF687Q8N1G0 1237 aa3.67□□□□□ -1.82
RNU6-340P-201ENST00000364005 ZNF710Q8N1W2 664 aa3.67□□□□□ -1.82
RNU6-340P-201ENST00000364005 HCSTQ9UBK5 93 aa3.66□□□□□ -1.82
RNU6-340P-201ENST00000364005 L3MBTL3Q96JM7 780 aaPredicted RBP3.65□□□□□ -1.83
RNU6-340P-201ENST00000364005 PDCD7Q8N8D1 485 aaKnown RBP3.64□□□□□ -1.83
RNU6-340P-201ENST00000364005 SPDYE4A6NLX3 237 aa3.63□□□□□ -1.83
RNU6-340P-201ENST00000364005 RGS20O76081 388 aa3.62□□□□□ -1.83
RNU6-340P-201ENST00000364005 DOK7Q18PE1 504 aa3.61□□□□□ -1.83
RNU6-340P-201ENST00000364005 Q6ZNB5 142 aa3.6□□□□□ -1.83
RNU6-340P-201ENST00000364005 LSM11P83369 360 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU6-340P-201ENST00000364005 RIMBP2O15034 1052 aa3.58□□□□□ -1.84
RNU6-340P-201ENST00000364005 PLEKHG5O94827 1062 aa3.55□□□□□ -1.84
RNU6-340P-201ENST00000364005 MKRN3Q13064 507 aaKnown RBP3.55□□□□□ -1.84
RNU6-340P-201ENST00000364005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU6-340P-201ENST00000364005 DPY19L2Q6NUT2 758 aa3.54□□□□□ -1.84
RNU6-340P-201ENST00000364005 MIER1Q8N108 512 aa3.54□□□□□ -1.84
RNU6-340P-201ENST00000364005 GOLGA2Q08379 1002 aa3.53□□□□□ -1.84
RNU6-340P-201ENST00000364005 SUZ12Q15022 739 aaKnown RBP3.53□□□□□ -1.84
RNU6-340P-201ENST00000364005 GPR153Q6NV75 609 aa3.53□□□□□ -1.84
RNU6-340P-201ENST00000364005 KRTAP1-3Q8IUG1 177 aa3.53□□□□□ -1.84
RNU6-340P-201ENST00000364005 ZSWIM6Q9HCJ5 1215 aa3.53□□□□□ -1.84
RNU6-340P-201ENST00000364005 NUBP1P53384 320 aa3.52□□□□□ -1.85
RNU6-340P-201ENST00000364005 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
RNU6-340P-201ENST00000364005 PCDHB8Q9UN66 801 aa3.52□□□□□ -1.85
RNU6-340P-201ENST00000364005 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
RNU6-340P-201ENST00000364005 BOLA1Q9Y3E2 137 aa3.51□□□□□ -1.85
RNU6-340P-201ENST00000364005 G3V3G9 751 aa3.5□□□□□ -1.85
RNU6-340P-201ENST00000364005 LCE2BO14633 110 aa3.5□□□□□ -1.85
RNU6-340P-201ENST00000364005 DCAF8Q5TAQ9 597 aa3.5□□□□□ -1.85
RNU6-340P-201ENST00000364005 A0A0G2JS52 829 aa3.49□□□□□ -1.85
RNU6-340P-201ENST00000364005 ARSIQ5FYB1 569 aa3.49□□□□□ -1.85
RNU6-340P-201ENST00000364005 IFFO2Q5TF58 517 aa3.49□□□□□ -1.85
RNU6-340P-201ENST00000364005 POTEEQ6S8J3 1075 aa3.49□□□□□ -1.85
RNU6-340P-201ENST00000364005 FAM212AQ96EL1 285 aa3.49□□□□□ -1.85
RNU6-340P-201ENST00000364005 AXIN2Q9Y2T1 843 aa3.49□□□□□ -1.85
RNU6-340P-201ENST00000364005 ZNF316A6NFI3 1004 aaPredicted RBP3.48□□□□□ -1.85
RNU6-340P-201ENST00000364005 PYGBP11216 843 aa3.48□□□□□ -1.85
RNU6-340P-201ENST00000364005 TRAF7Q6Q0C0 670 aa3.48□□□□□ -1.85
RNU6-340P-201ENST00000364005 ILDR1Q86SU0 546 aaPredicted RBP3.48□□□□□ -1.85
RNU6-340P-201ENST00000364005 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
RNU6-340P-201ENST00000364005 PBX2P40425 430 aa3.47□□□□□ -1.85
RNU6-340P-201ENST00000364005 ZNF775Q96BV0 537 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms