RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 EEA1Q15075 1411 aa28.35■■■□□ 2.13
SMURF1-201ENST00000361125 NACADO15069 1562 aa28.34■■■□□ 2.13
SMURF1-201ENST00000361125 PLEKHD1A6NEE1 506 aa28.27■■■□□ 2.12
SMURF1-201ENST00000361125 TNIKQ9UKE5 1360 aa28.24■■■□□ 2.11
SMURF1-201ENST00000361125 HSP90AA1P07900 732 aaKnown RBP28.24■■■□□ 2.11
SMURF1-201ENST00000361125 EIF4G2P78344 907 aaKnown RBP eCLIP28.23■■■□□ 2.11
SMURF1-201ENST00000361125 IRX6P78412 446 aaPredicted RBP28.23■■■□□ 2.11
SMURF1-201ENST00000361125 CCDC136Q96JN2 1154 aa28.23■■■□□ 2.11
SMURF1-201ENST00000361125 RGL3Q3MIN7 710 aa28.2■■■□□ 2.11
SMURF1-201ENST00000361125 KIF27Q86VH2 1401 aa28.19■■■□□ 2.1
SMURF1-201ENST00000361125 UPF2Q9HAU5 1272 aaKnown RBP28.19■■■□□ 2.1
SMURF1-201ENST00000361125 PLEKHG5O94827 1062 aa28.18■■■□□ 2.1
SMURF1-201ENST00000361125 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.17■■■□□ 2.1
SMURF1-201ENST00000361125 ZBTB7CA1YPR0 619 aa28.14■■■□□ 2.09
SMURF1-201ENST00000361125 PPP1R15AO75807 674 aaPredicted RBP28.12■■■□□ 2.09
SMURF1-201ENST00000361125 CFDP1Q9UEE9 299 aaPredicted RBP28.12■■■□□ 2.09
SMURF1-201ENST00000361125 CEP164Q9UPV0 1460 aa28.1■■■□□ 2.09
SMURF1-201ENST00000361125 SENP3-EIF4A1A0A087X0R7 540 aa28.08■■■□□ 2.09
SMURF1-201ENST00000361125 C14orf37Q86TY3 774 aa28.05■■■□□ 2.08
SMURF1-201ENST00000361125 ERCC6Q03468 1493 aa28.04■■■□□ 2.08
SMURF1-201ENST00000361125 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
SMURF1-201ENST00000361125 BAZ1AQ9NRL2 1556 aaPredicted RBP28■■■□□ 2.07
SMURF1-201ENST00000361125 A0A0G2JS52 829 aa27.99■■■□□ 2.07
SMURF1-201ENST00000361125 NBR1Q14596 966 aa27.98■■■□□ 2.07
SMURF1-201ENST00000361125 ARID4BQ4LE39 1312 aaPredicted RBP27.97■■■□□ 2.07
SMURF1-201ENST00000361125 ANP32BQ92688 251 aaKnown RBP27.95■■■□□ 2.06
SMURF1-201ENST00000361125 SIN3AQ96ST3 1273 aa27.93■■■□□ 2.06
SMURF1-201ENST00000361125 CARD11Q9BXL7 1154 aa27.91■■■□□ 2.06
SMURF1-201ENST00000361125 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
SMURF1-201ENST00000361125 MYH16Q9H6N6 1097 aa27.87■■■□□ 2.05
SMURF1-201ENST00000361125 SOGA1O94964 1423 aa27.84■■■□□ 2.05
SMURF1-201ENST00000361125 ARXQ96QS3 562 aa27.84■■■□□ 2.05
SMURF1-201ENST00000361125 KNSTRNQ9Y448 316 aa27.83■■■□□ 2.05
SMURF1-201ENST00000361125 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
SMURF1-201ENST00000361125 CUX2O14529 1486 aa27.81■■■□□ 2.04
SMURF1-201ENST00000361125 SUPT16HQ9Y5B9 1047 aaKnown RBP27.8■■■□□ 2.04
SMURF1-201ENST00000361125 ANP32EQ9BTT0 268 aa27.79■■■□□ 2.04
SMURF1-201ENST00000361125 CARMIL1Q5VZK9 1371 aa27.78■■■□□ 2.04
SMURF1-201ENST00000361125 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
SMURF1-201ENST00000361125 CFAP53Q96M91 514 aa27.76■■■□□ 2.03
SMURF1-201ENST00000361125 CDCA8Q53HL2 280 aa27.75■■■□□ 2.03
SMURF1-201ENST00000361125 NEUROD2Q15784 382 aa27.71■■■□□ 2.03
SMURF1-201ENST00000361125 EIF5BO60841 1220 aaKnown RBP27.71■■■□□ 2.03
SMURF1-201ENST00000361125 FHAD1B1AJZ9 1412 aa27.68■■■□□ 2.02
SMURF1-201ENST00000361125 TNNT2P45379 298 aaPredicted RBP27.68■■■□□ 2.02
SMURF1-201ENST00000361125 ABCC8Q09428 1581 aa27.67■■■□□ 2.02
SMURF1-201ENST00000361125 POGKQ9P215 609 aa27.67■■■□□ 2.02
SMURF1-201ENST00000361125 CC2D1BQ5T0F9 858 aaKnown RBP27.66■■■□□ 2.02
SMURF1-201ENST00000361125 HAP1P54257 671 aaPredicted RBP27.66■■■□□ 2.02
SMURF1-201ENST00000361125 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
SMURF1-201ENST00000361125 LAS1LQ9Y4W2 734 aaKnown RBP27.65■■■□□ 2.02
SMURF1-201ENST00000361125 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
SMURF1-201ENST00000361125 DCAF11Q8TEB1 546 aa27.6■■■□□ 2.01
SMURF1-201ENST00000361125 VPS8Q8N3P4 1428 aa27.58■■■□□ 2.01
SMURF1-201ENST00000361125 LMOD2Q6P5Q4 547 aa27.56■■■□□ 2
SMURF1-201ENST00000361125 MAPK8IP3Q9UPT6 1336 aa27.56■■■□□ 2
SMURF1-201ENST00000361125 FTSJ3Q8IY81 847 aaKnown RBP27.56■■■□□ 2
SMURF1-201ENST00000361125 MLECQ14165 292 aa27.52■■■□□ 2
SMURF1-201ENST00000361125 PPP4R2Q9NY27 417 aa27.51■■□□□ 1.99
SMURF1-201ENST00000361125 KANK4Q5T7N3 995 aaPredicted RBP27.5■■□□□ 1.99
SMURF1-201ENST00000361125 NUDCQ9Y266 331 aa27.49■■□□□ 1.99
SMURF1-201ENST00000361125 BECN1Q14457 450 aa27.48■■□□□ 1.99
SMURF1-201ENST00000361125 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
SMURF1-201ENST00000361125 DDRGK1Q96HY6 314 aa27.48■■□□□ 1.99
SMURF1-201ENST00000361125 KANK1Q14678 1352 aa27.48■■□□□ 1.99
SMURF1-201ENST00000361125 FOXD1Q16676 465 aa27.47■■□□□ 1.99
SMURF1-201ENST00000361125 FRAT1Q92837 279 aaPredicted RBP27.47■■□□□ 1.99
SMURF1-201ENST00000361125 U2SURPO15042 1029 aaKnown RBP27.46■■□□□ 1.99
SMURF1-201ENST00000361125 TMF1P82094 1093 aa27.44■■□□□ 1.98
SMURF1-201ENST00000361125 SETD5Q9C0A6 1442 aa27.44■■□□□ 1.98
SMURF1-201ENST00000361125 SAFB2Q14151 953 aaKnown RBP eCLIP27.42■■□□□ 1.98
SMURF1-201ENST00000361125 TIMELESSQ9UNS1 1208 aa27.41■■□□□ 1.98
SMURF1-201ENST00000361125 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
SMURF1-201ENST00000361125 CCER2I3L3R5 266 aa27.4■■□□□ 1.98
SMURF1-201ENST00000361125 TDRD9Q8NDG6 1382 aaKnown RBP27.4■■□□□ 1.98
SMURF1-201ENST00000361125 TRHP20396 242 aaPredicted RBP27.39■■□□□ 1.98
SMURF1-201ENST00000361125 PKD2Q13563 968 aa27.37■■□□□ 1.97
SMURF1-201ENST00000361125 GGT6Q6P531 493 aa27.36■■□□□ 1.97
SMURF1-201ENST00000361125 HSPA5P11021 654 aaKnown RBP27.36■■□□□ 1.97
SMURF1-201ENST00000361125 WIZO95785 1651 aa27.36■■□□□ 1.97
SMURF1-201ENST00000361125 RGS3P49796 1198 aa27.36■■□□□ 1.97
SMURF1-201ENST00000361125 SOX12O15370 315 aa27.36■■□□□ 1.97
SMURF1-201ENST00000361125 SRPK2P78362 688 aaKnown RBP27.35■■□□□ 1.97
SMURF1-201ENST00000361125 CASC1Q6TDU7 716 aa27.33■■□□□ 1.97
SMURF1-201ENST00000361125 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
SMURF1-201ENST00000361125 B4GALNT3Q6L9W6 998 aa27.33■■□□□ 1.97
SMURF1-201ENST00000361125 TPRNQ4KMQ1 711 aa27.32■■□□□ 1.96
SMURF1-201ENST00000361125 NCLP19338 710 aaKnown RBP27.32■■□□□ 1.96
SMURF1-201ENST00000361125 CARMIL2Q6F5E8 1435 aa27.3■■□□□ 1.96
SMURF1-201ENST00000361125 NOP58Q9Y2X3 529 aaKnown RBP27.29■■□□□ 1.96
SMURF1-201ENST00000361125 STK26Q9P289 416 aa27.29■■□□□ 1.96
SMURF1-201ENST00000361125 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
SMURF1-201ENST00000361125 RBM19Q9Y4C8 960 aaKnown RBP27.26■■□□□ 1.96
SMURF1-201ENST00000361125 MORC1Q86VD1 984 aa27.26■■□□□ 1.95
SMURF1-201ENST00000361125 TOP2AP11388 1531 aaKnown RBP27.25■■□□□ 1.95
SMURF1-201ENST00000361125 GOLGA6L22H0YM25 854 aa27.23■■□□□ 1.95
SMURF1-201ENST00000361125 MPHOSPH9Q99550 1183 aa27.21■■□□□ 1.95
SMURF1-201ENST00000361125 PNNQ9H307 717 aaKnown RBP27.21■■□□□ 1.95
SMURF1-201ENST00000361125 HDGFP51858 240 aaKnown RBP27.2■■□□□ 1.94
SMURF1-201ENST00000361125 FMN1Q68DA7 1419 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms