RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
COL4A2-201ENST00000360467 MRS2Q9HD23 443 aa22.89■■□□□ 1.25
COL4A2-201ENST00000360467 PPM1GO15355 546 aaPredicted RBP22.89■■□□□ 1.25
COL4A2-201ENST00000360467 CCDC136Q96JN2 1154 aa22.87■■□□□ 1.25
COL4A2-201ENST00000360467 NBR1Q14596 966 aa22.86■■□□□ 1.25
COL4A2-201ENST00000360467 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.86■■□□□ 1.25
COL4A2-201ENST00000360467 LMOD2Q6P5Q4 547 aa22.84■■□□□ 1.25
COL4A2-201ENST00000360467 EIF5BO60841 1220 aaKnown RBP22.82■■□□□ 1.24
COL4A2-201ENST00000360467 TULP1O00294 542 aaPredicted RBP22.82■■□□□ 1.24
COL4A2-201ENST00000360467 MYH16Q9H6N6 1097 aa22.81■■□□□ 1.24
COL4A2-201ENST00000360467 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
COL4A2-201ENST00000360467 TAOK2Q9UL54 1235 aa22.74■■□□□ 1.23
COL4A2-201ENST00000360467 PLEKHD1A6NEE1 506 aa22.74■■□□□ 1.23
COL4A2-201ENST00000360467 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
COL4A2-201ENST00000360467 LAS1LQ9Y4W2 734 aaKnown RBP22.73■■□□□ 1.23
COL4A2-201ENST00000360467 TNNT2P45379 298 aaPredicted RBP22.67■■□□□ 1.22
COL4A2-201ENST00000360467 NEUROD2Q15784 382 aa22.66■■□□□ 1.22
COL4A2-201ENST00000360467 NPHP1O15259 732 aa22.65■■□□□ 1.22
COL4A2-201ENST00000360467 MLECQ14165 292 aa22.65■■□□□ 1.22
COL4A2-201ENST00000360467 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
COL4A2-201ENST00000360467 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.21
COL4A2-201ENST00000360467 CDK11BP21127 795 aaKnown RBP22.64■■□□□ 1.21
COL4A2-201ENST00000360467 EIF4G2P78344 907 aaKnown RBP eCLIP22.63■■□□□ 1.21
COL4A2-201ENST00000360467 CLIP1P30622 1438 aa22.63■■□□□ 1.21
COL4A2-201ENST00000360467 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
COL4A2-201ENST00000360467 SOX12O15370 315 aa22.58■■□□□ 1.21
COL4A2-201ENST00000360467 MIER1Q8N108 512 aa22.58■■□□□ 1.21
COL4A2-201ENST00000360467 POGKQ9P215 609 aa22.57■■□□□ 1.2
COL4A2-201ENST00000360467 KNSTRNQ9Y448 316 aa22.52■■□□□ 1.2
COL4A2-201ENST00000360467 CFAP53Q96M91 514 aa22.51■■□□□ 1.19
COL4A2-201ENST00000360467 CARD11Q9BXL7 1154 aa22.5■■□□□ 1.19
COL4A2-201ENST00000360467 NCLP19338 710 aaKnown RBP22.48■■□□□ 1.19
COL4A2-201ENST00000360467 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
COL4A2-201ENST00000360467 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
COL4A2-201ENST00000360467 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
COL4A2-201ENST00000360467 FTSJ3Q8IY81 847 aaKnown RBP22.47■■□□□ 1.19
COL4A2-201ENST00000360467 SAFB2Q14151 953 aaKnown RBP eCLIP22.45■■□□□ 1.18
COL4A2-201ENST00000360467 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
COL4A2-201ENST00000360467 MAPK8IP3Q9UPT6 1336 aa22.42■■□□□ 1.18
COL4A2-201ENST00000360467 U2SURPO15042 1029 aaKnown RBP22.42■■□□□ 1.18
COL4A2-201ENST00000360467 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
COL4A2-201ENST00000360467 FRAT1Q92837 279 aaPredicted RBP22.4■■□□□ 1.18
COL4A2-201ENST00000360467 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.18
COL4A2-201ENST00000360467 OS9Q13438 667 aaPredicted RBP22.36■■□□□ 1.17
COL4A2-201ENST00000360467 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
COL4A2-201ENST00000360467 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
COL4A2-201ENST00000360467 CEP162Q5TB80 1403 aa22.35■■□□□ 1.17
COL4A2-201ENST00000360467 NAP1L2Q9ULW6 460 aaPredicted RBP22.34■■□□□ 1.17
COL4A2-201ENST00000360467 CASC1Q6TDU7 716 aa22.33■■□□□ 1.17
COL4A2-201ENST00000360467 CDCA8Q53HL2 280 aa22.31■■□□□ 1.16
COL4A2-201ENST00000360467 BECN1Q14457 450 aa22.3■■□□□ 1.16
COL4A2-201ENST00000360467 STK26Q9P289 416 aa22.3■■□□□ 1.16
COL4A2-201ENST00000360467 ZRSR1Q15695 479 aaKnown RBP22.28■■□□□ 1.16
COL4A2-201ENST00000360467 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
COL4A2-201ENST00000360467 SRPK2P78362 688 aaKnown RBP22.28■■□□□ 1.16
COL4A2-201ENST00000360467 NUDCQ9Y266 331 aa22.28■■□□□ 1.16
COL4A2-201ENST00000360467 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
COL4A2-201ENST00000360467 SUPT16HQ9Y5B9 1047 aaKnown RBP22.27■■□□□ 1.16
COL4A2-201ENST00000360467 NCBP3Q53F19 620 aaKnown RBP22.27■■□□□ 1.16
COL4A2-201ENST00000360467 RGS3P49796 1198 aa22.27■■□□□ 1.16
COL4A2-201ENST00000360467 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
COL4A2-201ENST00000360467 GGT6Q6P531 493 aa22.24■■□□□ 1.15
COL4A2-201ENST00000360467 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
COL4A2-201ENST00000360467 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
COL4A2-201ENST00000360467 PAK3O75914 559 aaPredicted RBP22.23■■□□□ 1.15
COL4A2-201ENST00000360467 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
COL4A2-201ENST00000360467 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
COL4A2-201ENST00000360467 DDRGK1Q96HY6 314 aa22.2■■□□□ 1.14
COL4A2-201ENST00000360467 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
COL4A2-201ENST00000360467 PTMAP06454 111 aaKnown RBP22.2■■□□□ 1.14
COL4A2-201ENST00000360467 FGD1P98174 961 aa22.2■■□□□ 1.14
COL4A2-201ENST00000360467 ZNF330Q9Y3S2 320 aaPredicted RBP22.19■■□□□ 1.14
COL4A2-201ENST00000360467 GOLGA6L22H0YM25 854 aa22.19■■□□□ 1.14
COL4A2-201ENST00000360467 PLCB2Q00722 1185 aa22.19■■□□□ 1.14
COL4A2-201ENST00000360467 TRIM44Q96DX7 344 aaPredicted RBP22.19■■□□□ 1.14
COL4A2-201ENST00000360467 KCNJ4P48050 445 aa22.17■■□□□ 1.14
COL4A2-201ENST00000360467 CLSTN1O94985 981 aa22.16■■□□□ 1.14
COL4A2-201ENST00000360467 KANK1Q14678 1352 aa22.15■■□□□ 1.14
COL4A2-201ENST00000360467 FOXD1Q16676 465 aa22.14■■□□□ 1.13
COL4A2-201ENST00000360467 CCDC9Q9Y3X0 531 aaKnown RBP22.12■■□□□ 1.13
COL4A2-201ENST00000360467 APBB1O00213 710 aa22.11■■□□□ 1.13
COL4A2-201ENST00000360467 NUTM2DQ5VT03 806 aaPredicted RBP22.1■■□□□ 1.13
COL4A2-201ENST00000360467 CSB-PGBD3P0DP91 1061 aa22.09■■□□□ 1.13
COL4A2-201ENST00000360467 DNTTIP2Q5QJE6 756 aaKnown RBP22.09■■□□□ 1.13
COL4A2-201ENST00000360467 TMF1P82094 1093 aa22.08■■□□□ 1.13
COL4A2-201ENST00000360467 SPRYD3Q8NCJ5 442 aa22.08■■□□□ 1.13
COL4A2-201ENST00000360467 MORC1Q86VD1 984 aa22.08■■□□□ 1.12
COL4A2-201ENST00000360467 HSP90AB1P08238 724 aaKnown RBP22.07■■□□□ 1.12
COL4A2-201ENST00000360467 AMER1Q5JTC6 1135 aaPredicted RBP22.05■■□□□ 1.12
COL4A2-201ENST00000360467 HDGFP51858 240 aaKnown RBP22.04■■□□□ 1.12
COL4A2-201ENST00000360467 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
COL4A2-201ENST00000360467 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
COL4A2-201ENST00000360467 CUX2O14529 1486 aa22.02■■□□□ 1.12
COL4A2-201ENST00000360467 GLIPR1L2Q4G1C9 344 aa22.01■■□□□ 1.11
COL4A2-201ENST00000360467 PNNQ9H307 717 aaKnown RBP21.99■■□□□ 1.11
COL4A2-201ENST00000360467 EEA1Q15075 1411 aa21.99■■□□□ 1.11
COL4A2-201ENST00000360467 B4GALNT3Q6L9W6 998 aa21.97■■□□□ 1.11
COL4A2-201ENST00000360467 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.1
COL4A2-201ENST00000360467 NUTM2FA1L443 756 aa21.95■■□□□ 1.1
COL4A2-201ENST00000360467 HDGFL2Q7Z4V5 671 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms