RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 SALL2Q9Y467 1007 aaPredicted RBP7.72□□□□□ -1.17
DSC3-201ENST00000360428 NRDCO43847 1150 aa7.72□□□□□ -1.17
DSC3-201ENST00000360428 P3H3Q8IVL6 736 aa7.71□□□□□ -1.17
DSC3-201ENST00000360428 UNC13AQ9UPW8 1703 aa7.7□□□□□ -1.18
DSC3-201ENST00000360428 CHMP4BQ9H444 224 aaKnown RBP7.7□□□□□ -1.18
DSC3-201ENST00000360428 CHAF1AQ13111 956 aaPredicted RBP7.69□□□□□ -1.18
DSC3-201ENST00000360428 EIF4G2P78344 907 aaKnown RBP eCLIP7.68□□□□□ -1.18
DSC3-201ENST00000360428 PABPN1Q86U42 306 aaKnown RBP eCLIP7.68□□□□□ -1.18
DSC3-201ENST00000360428 L1TD1Q5T7N2 865 aaKnown RBP7.68□□□□□ -1.18
DSC3-201ENST00000360428 SCAF1Q9H7N4 1312 aaKnown RBP7.68□□□□□ -1.18
DSC3-201ENST00000360428 CFAP53Q96M91 514 aa7.67□□□□□ -1.18
DSC3-201ENST00000360428 MS4A1P11836 297 aa7.66□□□□□ -1.18
DSC3-201ENST00000360428 CDCA8Q53HL2 280 aa7.66□□□□□ -1.18
DSC3-201ENST00000360428 CFAP44Q96MT7 982 aa7.66□□□□□ -1.18
DSC3-201ENST00000360428 PTMSP20962 102 aa7.66□□□□□ -1.18
DSC3-201ENST00000360428 NPM1P06748 294 aaKnown RBP eCLIP7.66□□□□□ -1.18
DSC3-201ENST00000360428 NOP58Q9Y2X3 529 aaKnown RBP7.66□□□□□ -1.18
DSC3-201ENST00000360428 ARID3CA6NKF2 412 aa7.64□□□□□ -1.19
DSC3-201ENST00000360428 TSPY4P0CV99 314 aa7.64□□□□□ -1.19
DSC3-201ENST00000360428 TSPY10P0CW01 314 aa7.64□□□□□ -1.19
DSC3-201ENST00000360428 PPP4R2Q9NY27 417 aa7.64□□□□□ -1.19
DSC3-201ENST00000360428 FTSJ3Q8IY81 847 aaKnown RBP7.64□□□□□ -1.19
DSC3-201ENST00000360428 MIER1Q8N108 512 aa7.64□□□□□ -1.19
DSC3-201ENST00000360428 MSNP26038 577 aaKnown RBP7.64□□□□□ -1.19
DSC3-201ENST00000360428 IRX6P78412 446 aaPredicted RBP7.64□□□□□ -1.19
DSC3-201ENST00000360428 HSP90AB1P08238 724 aaKnown RBP7.64□□□□□ -1.19
DSC3-201ENST00000360428 RB1CC1Q8TDY2 1594 aa7.63□□□□□ -1.19
DSC3-201ENST00000360428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.62□□□□□ -1.19
DSC3-201ENST00000360428 RSF1Q96T23 1441 aaPredicted RBP7.61□□□□□ -1.19
DSC3-201ENST00000360428 PNNQ9H307 717 aaKnown RBP7.61□□□□□ -1.19
DSC3-201ENST00000360428 KDM2AQ9Y2K7 1162 aa7.61□□□□□ -1.19
DSC3-201ENST00000360428 CECR2Q9BXF3 1484 aa7.61□□□□□ -1.19
DSC3-201ENST00000360428 MTUS2Q5JR59 1369 aa7.6□□□□□ -1.19
DSC3-201ENST00000360428 SCRIBQ14160 1630 aa7.6□□□□□ -1.19
DSC3-201ENST00000360428 HSCBQ8IWL3 235 aa7.6□□□□□ -1.19
DSC3-201ENST00000360428 PLCB2Q00722 1185 aa7.59□□□□□ -1.19
DSC3-201ENST00000360428 MCCP23508 829 aa7.59□□□□□ -1.2
DSC3-201ENST00000360428 KNSTRNQ9Y448 316 aa7.59□□□□□ -1.2
DSC3-201ENST00000360428 GOLGA6L4A6NEF3 574 aa7.58□□□□□ -1.2
DSC3-201ENST00000360428 CHIC2Q9UKJ5 165 aa7.58□□□□□ -1.2
DSC3-201ENST00000360428 NUDCQ9Y266 331 aa7.58□□□□□ -1.2
DSC3-201ENST00000360428 USP35Q9P2H5 1018 aa7.57□□□□□ -1.2
DSC3-201ENST00000360428 SUPT16HQ9Y5B9 1047 aaKnown RBP7.57□□□□□ -1.2
DSC3-201ENST00000360428 MAPK8IP3Q9UPT6 1336 aa7.57□□□□□ -1.2
DSC3-201ENST00000360428 MROH2BQ7Z745 1585 aa7.57□□□□□ -1.2
DSC3-201ENST00000360428 LAS1LQ9Y4W2 734 aaKnown RBP7.57□□□□□ -1.2
DSC3-201ENST00000360428 KIAA2012Q0VF49 1180 aa7.56□□□□□ -1.2
DSC3-201ENST00000360428 FGD1P98174 961 aa7.56□□□□□ -1.2
DSC3-201ENST00000360428 DRC7Q8IY82 874 aa7.56□□□□□ -1.2
DSC3-201ENST00000360428 WIZO95785 1651 aa7.55□□□□□ -1.2
DSC3-201ENST00000360428 EEA1Q15075 1411 aa7.54□□□□□ -1.2
DSC3-201ENST00000360428 RTN4Q9NQC3 1192 aaKnown RBP7.54□□□□□ -1.2
DSC3-201ENST00000360428 KCNJ4P48050 445 aa7.54□□□□□ -1.2
DSC3-201ENST00000360428 DEKP35659 375 aaKnown RBP7.54□□□□□ -1.2
DSC3-201ENST00000360428 GBP4Q96PP9 640 aa7.53□□□□□ -1.2
DSC3-201ENST00000360428 PPP1R15AO75807 674 aaPredicted RBP7.53□□□□□ -1.2
DSC3-201ENST00000360428 CLIP1P30622 1438 aa7.53□□□□□ -1.2
DSC3-201ENST00000360428 HTATSF1O43719 755 aaKnown RBP7.53□□□□□ -1.2
DSC3-201ENST00000360428 OS9Q13438 667 aaPredicted RBP7.53□□□□□ -1.2
DSC3-201ENST00000360428 TPRNQ4KMQ1 711 aa7.53□□□□□ -1.2
DSC3-201ENST00000360428 SYAP1Q96A49 352 aaPredicted RBP7.53□□□□□ -1.2
DSC3-201ENST00000360428 C14orf37Q86TY3 774 aa7.52□□□□□ -1.2
DSC3-201ENST00000360428 A0A0G2JS52 829 aa7.52□□□□□ -1.21
DSC3-201ENST00000360428 ZBTB7CA1YPR0 619 aa7.52□□□□□ -1.21
DSC3-201ENST00000360428 NACADO15069 1562 aa7.52□□□□□ -1.21
DSC3-201ENST00000360428 BICRAQ9NZM4 1560 aa7.52□□□□□ -1.21
DSC3-201ENST00000360428 TNNT3P45378 269 aaPredicted RBP7.52□□□□□ -1.21
DSC3-201ENST00000360428 TPM4P67936 248 aa7.52□□□□□ -1.21
DSC3-201ENST00000360428 GOLGA3Q08378 1498 aa7.52□□□□□ -1.21
DSC3-201ENST00000360428 HAP1P54257 671 aaPredicted RBP7.52□□□□□ -1.21
DSC3-201ENST00000360428 RGS3P49796 1198 aa7.51□□□□□ -1.21
DSC3-201ENST00000360428 TULP1O00294 542 aaPredicted RBP7.51□□□□□ -1.21
DSC3-201ENST00000360428 GOLGA6L1Q8N7Z2 621 aa7.51□□□□□ -1.21
DSC3-201ENST00000360428 PLPPR3Q6T4P5 718 aa7.5□□□□□ -1.21
DSC3-201ENST00000360428 CARD11Q9BXL7 1154 aa7.5□□□□□ -1.21
DSC3-201ENST00000360428 CSPP1Q1MSJ5 1256 aa7.49□□□□□ -1.21
DSC3-201ENST00000360428 GOLGA2Q08379 1002 aa7.49□□□□□ -1.21
DSC3-201ENST00000360428 NAP1L2Q9ULW6 460 aaPredicted RBP7.49□□□□□ -1.21
DSC3-201ENST00000360428 NOC3LQ8WTT2 800 aaKnown RBP7.49□□□□□ -1.21
DSC3-201ENST00000360428 FRAT1Q92837 279 aaPredicted RBP7.49□□□□□ -1.21
DSC3-201ENST00000360428 HIRIP3Q9BW71 556 aaPredicted RBP7.48□□□□□ -1.21
DSC3-201ENST00000360428 CCER2I3L3R5 266 aa7.48□□□□□ -1.21
DSC3-201ENST00000360428 RRP7BPQ9NSQ0 103 aa7.48□□□□□ -1.21
DSC3-201ENST00000360428 ARID4BQ4LE39 1312 aaPredicted RBP7.48□□□□□ -1.21
DSC3-201ENST00000360428 GNL2Q13823 731 aaKnown RBP7.48□□□□□ -1.21
DSC3-201ENST00000360428 SETQ01105 290 aaPredicted RBP7.47□□□□□ -1.21
DSC3-201ENST00000360428 CCDC34Q96HJ3 373 aa7.47□□□□□ -1.21
DSC3-201ENST00000360428 KIAA1211Q6ZU35 1233 aa7.46□□□□□ -1.21
DSC3-201ENST00000360428 TIMELESSQ9UNS1 1208 aa7.46□□□□□ -1.22
DSC3-201ENST00000360428 PLEKHD1A6NEE1 506 aa7.46□□□□□ -1.22
DSC3-201ENST00000360428 IPO8O15397 1037 aaKnown RBP7.46□□□□□ -1.22
DSC3-201ENST00000360428 TCERG1O14776 1098 aaKnown RBP7.45□□□□□ -1.22
DSC3-201ENST00000360428 PHF14O94880 888 aa7.45□□□□□ -1.22
DSC3-201ENST00000360428 TMF1P82094 1093 aa7.45□□□□□ -1.22
DSC3-201ENST00000360428 GOLGA6L3A6NEY3 463 aa7.45□□□□□ -1.22
DSC3-201ENST00000360428 NPHP1O15259 732 aa7.45□□□□□ -1.22
DSC3-201ENST00000360428 CALD1Q05682 793 aaKnown RBP7.45□□□□□ -1.22
DSC3-201ENST00000360428 B4GALNT3Q6L9W6 998 aa7.44□□□□□ -1.22
DSC3-201ENST00000360428 CHMP4AQ9BY43 222 aa7.44□□□□□ -1.22
DSC3-201ENST00000360428 NEUROD2Q15784 382 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms