RNA–Protein interactions for RNA: ENST00000359237.8

PLAC1-201, Transcript of placenta specific 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLAC1, Length 1,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLAC1-201ENST00000359237 CC2D2AQ9P2K1 1620 aa12.83□□□□□ -0.36
PLAC1-201ENST00000359237 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
PLAC1-201ENST00000359237 ZBTB22O15209 634 aa12.73□□□□□ -0.37
PLAC1-201ENST00000359237 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
PLAC1-201ENST00000359237 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
PLAC1-201ENST00000359237 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
PLAC1-201ENST00000359237 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
PLAC1-201ENST00000359237 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
PLAC1-201ENST00000359237 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
PLAC1-201ENST00000359237 FAM163AQ96GL9 167 aaPredicted RBP12.55□□□□□ -0.4
PLAC1-201ENST00000359237 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
PLAC1-201ENST00000359237 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
PLAC1-201ENST00000359237 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
PLAC1-201ENST00000359237 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.4
PLAC1-201ENST00000359237 C7P10643 843 aa12.52□□□□□ -0.41
PLAC1-201ENST00000359237 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
PLAC1-201ENST00000359237 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
PLAC1-201ENST00000359237 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
PLAC1-201ENST00000359237 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
PLAC1-201ENST00000359237 NCAPD3P42695 1498 aa12.51□□□□□ -0.41
PLAC1-201ENST00000359237 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
PLAC1-201ENST00000359237 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
PLAC1-201ENST00000359237 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
PLAC1-201ENST00000359237 PEG3Q9GZU2 1588 aa12.46□□□□□ -0.42
PLAC1-201ENST00000359237 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
PLAC1-201ENST00000359237 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
PLAC1-201ENST00000359237 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
PLAC1-201ENST00000359237 WIZO95785 1651 aa12.42□□□□□ -0.42
PLAC1-201ENST00000359237 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
PLAC1-201ENST00000359237 LCE2DQ5TA82 110 aaPredicted RBP12.38□□□□□ -0.43
PLAC1-201ENST00000359237 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
PLAC1-201ENST00000359237 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
PLAC1-201ENST00000359237 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
PLAC1-201ENST00000359237 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
PLAC1-201ENST00000359237 NESP48681 1621 aa12.26□□□□□ -0.45
PLAC1-201ENST00000359237 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
PLAC1-201ENST00000359237 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
PLAC1-201ENST00000359237 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
PLAC1-201ENST00000359237 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
PLAC1-201ENST00000359237 CADPSQ9ULU8 1353 aa12.16□□□□□ -0.46
PLAC1-201ENST00000359237 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
PLAC1-201ENST00000359237 SEC24BO95487 1268 aa12.14□□□□□ -0.47
PLAC1-201ENST00000359237 PDS5BQ9NTI5 1447 aa12.13□□□□□ -0.47
PLAC1-201ENST00000359237 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
PLAC1-201ENST00000359237 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
PLAC1-201ENST00000359237 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
PLAC1-201ENST00000359237 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
PLAC1-201ENST00000359237 THOC2Q8NI27 1593 aaKnown RBP12.08□□□□□ -0.48
PLAC1-201ENST00000359237 CUX2O14529 1486 aa12.08□□□□□ -0.48
PLAC1-201ENST00000359237 CFTRP13569 1480 aa12.08□□□□□ -0.48
PLAC1-201ENST00000359237 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
PLAC1-201ENST00000359237 POTEFA5A3E0 1075 aa12.06□□□□□ -0.48
PLAC1-201ENST00000359237 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
PLAC1-201ENST00000359237 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
PLAC1-201ENST00000359237 FANCD2Q9BXW9 1451 aa12.04□□□□□ -0.48
PLAC1-201ENST00000359237 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
PLAC1-201ENST00000359237 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
PLAC1-201ENST00000359237 TIE1P35590 1138 aa12.03□□□□□ -0.48
PLAC1-201ENST00000359237 ST18O60284 1047 aa12.02□□□□□ -0.49
PLAC1-201ENST00000359237 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
PLAC1-201ENST00000359237 SLAIN1Q8ND83 568 aa12.01□□□□□ -0.49
PLAC1-201ENST00000359237 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
PLAC1-201ENST00000359237 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
PLAC1-201ENST00000359237 SPNS2Q8IVW8 549 aa12□□□□□ -0.49
PLAC1-201ENST00000359237 WDR62O43379 1518 aa11.96□□□□□ -0.49
PLAC1-201ENST00000359237 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.49
PLAC1-201ENST00000359237 IER5LQ5T953 404 aa11.93□□□□□ -0.5
PLAC1-201ENST00000359237 URB2Q14146 1524 aaKnown RBP11.92□□□□□ -0.5
PLAC1-201ENST00000359237 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
PLAC1-201ENST00000359237 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
PLAC1-201ENST00000359237 MAP3K13O43283 966 aa11.9□□□□□ -0.5
PLAC1-201ENST00000359237 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
PLAC1-201ENST00000359237 SNPHO15079 494 aa11.87□□□□□ -0.51
PLAC1-201ENST00000359237 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
PLAC1-201ENST00000359237 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
PLAC1-201ENST00000359237 TOPBP1Q92547 1522 aa11.85□□□□□ -0.51
PLAC1-201ENST00000359237 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
PLAC1-201ENST00000359237 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
PLAC1-201ENST00000359237 PLCG2P16885 1265 aa11.81□□□□□ -0.52
PLAC1-201ENST00000359237 IFT140Q96RY7 1462 aa11.76□□□□□ -0.53
PLAC1-201ENST00000359237 CUX1P39880 1505 aa11.76□□□□□ -0.53
PLAC1-201ENST00000359237 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
PLAC1-201ENST00000359237 MARVELD3Q96A59 401 aa11.74□□□□□ -0.53
PLAC1-201ENST00000359237 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
PLAC1-201ENST00000359237 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
PLAC1-201ENST00000359237 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
PLAC1-201ENST00000359237 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
PLAC1-201ENST00000359237 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
PLAC1-201ENST00000359237 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
PLAC1-201ENST00000359237 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
PLAC1-201ENST00000359237 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
PLAC1-201ENST00000359237 EIF4G3O43432 1585 aaKnown RBP11.7□□□□□ -0.54
PLAC1-201ENST00000359237 SOGA1O94964 1423 aa11.69□□□□□ -0.54
PLAC1-201ENST00000359237 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
PLAC1-201ENST00000359237 EMP3P54852 163 aa11.67□□□□□ -0.54
PLAC1-201ENST00000359237 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
PLAC1-201ENST00000359237 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
PLAC1-201ENST00000359237 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
PLAC1-201ENST00000359237 BIVM-ERCC5R4GMW8 1640 aa11.65□□□□□ -0.54
PLAC1-201ENST00000359237 MIER1Q8N108 512 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms