RNA–Protein interactions for RNA: ENST00000358070.9

DCX-202, Transcript of doublecortin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene DCX, Length 9,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCX-202ENST00000358070 CHAF1AQ13111 956 aaPredicted RBP6.54□□□□□ -1.36
DCX-202ENST00000358070 PNNQ9H307 717 aaKnown RBP6.53□□□□□ -1.36
DCX-202ENST00000358070 NEUROD2Q15784 382 aa6.53□□□□□ -1.36
DCX-202ENST00000358070 LMOD2Q6P5Q4 547 aa6.53□□□□□ -1.36
DCX-202ENST00000358070 ACIN1Q9UKV3 1341 aaKnown RBP6.52□□□□□ -1.37
DCX-202ENST00000358070 CEP89Q96ST8 783 aa6.52□□□□□ -1.37
DCX-202ENST00000358070 NRDCO43847 1150 aa6.52□□□□□ -1.37
DCX-202ENST00000358070 FGD1P98174 961 aa6.51□□□□□ -1.37
DCX-202ENST00000358070 DNTTIP2Q5QJE6 756 aaKnown RBP6.51□□□□□ -1.37
DCX-202ENST00000358070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.51□□□□□ -1.37
DCX-202ENST00000358070 ARID4BQ4LE39 1312 aaPredicted RBP6.5□□□□□ -1.37
DCX-202ENST00000358070 A0A0U1RQG5 324 aaPredicted RBP6.5□□□□□ -1.37
DCX-202ENST00000358070 PDE4CQ08493 712 aa6.5□□□□□ -1.37
DCX-202ENST00000358070 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.49□□□□□ -1.37
DCX-202ENST00000358070 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.49□□□□□ -1.37
DCX-202ENST00000358070 GOLGA6L6A8MZA4 724 aa6.49□□□□□ -1.37
DCX-202ENST00000358070 VSIG10Q8N0Z9 540 aa6.49□□□□□ -1.37
DCX-202ENST00000358070 CWC22Q9HCG8 908 aaKnown RBP6.49□□□□□ -1.37
DCX-202ENST00000358070 NAP1L2Q9ULW6 460 aaPredicted RBP6.49□□□□□ -1.37
DCX-202ENST00000358070 ANP32CO43423 234 aa6.49□□□□□ -1.37
DCX-202ENST00000358070 WDR70Q9NW82 654 aa6.49□□□□□ -1.37
DCX-202ENST00000358070 GOLGA4Q13439 2230 aaKnown RBP6.49□□□□□ -1.37
DCX-202ENST00000358070 WWC1Q8IX03 1113 aa6.48□□□□□ -1.37
DCX-202ENST00000358070 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
DCX-202ENST00000358070 NEUROD1Q13562 356 aa6.47□□□□□ -1.37
DCX-202ENST00000358070 AK7Q96M32 723 aa6.47□□□□□ -1.37
DCX-202ENST00000358070 PTMAP06454 111 aaKnown RBP6.47□□□□□ -1.37
DCX-202ENST00000358070 TRHP20396 242 aaPredicted RBP6.46□□□□□ -1.38
DCX-202ENST00000358070 FOXD1Q16676 465 aa6.46□□□□□ -1.38
DCX-202ENST00000358070 PPP1R15AO75807 674 aaPredicted RBP6.46□□□□□ -1.38
DCX-202ENST00000358070 PAF1Q8N7H5 531 aa6.46□□□□□ -1.38
DCX-202ENST00000358070 TPRNQ4KMQ1 711 aa6.45□□□□□ -1.38
DCX-202ENST00000358070 NBR1Q14596 966 aa6.45□□□□□ -1.38
DCX-202ENST00000358070 PPM1FP49593 454 aaPredicted RBP6.45□□□□□ -1.38
DCX-202ENST00000358070 ANO8Q9HCE9 1232 aaPredicted RBP6.45□□□□□ -1.38
DCX-202ENST00000358070 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.45□□□□□ -1.38
DCX-202ENST00000358070 GOLGA6L22H0YM25 854 aa6.44□□□□□ -1.38
DCX-202ENST00000358070 CCDC9Q9Y3X0 531 aaKnown RBP6.44□□□□□ -1.38
DCX-202ENST00000358070 CASC1Q6TDU7 716 aa6.43□□□□□ -1.38
DCX-202ENST00000358070 KCNJ4P48050 445 aa6.43□□□□□ -1.38
DCX-202ENST00000358070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.42□□□□□ -1.38
DCX-202ENST00000358070 CALRP27797 417 aaKnown RBP6.42□□□□□ -1.38
DCX-202ENST00000358070 PLCB2Q00722 1185 aa6.42□□□□□ -1.38
DCX-202ENST00000358070 TCEAL9Q9UHQ7 104 aa6.41□□□□□ -1.38
DCX-202ENST00000358070 GNL2Q13823 731 aaKnown RBP6.41□□□□□ -1.38
DCX-202ENST00000358070 CTDP1Q9Y5B0 961 aaPredicted RBP6.4□□□□□ -1.38
DCX-202ENST00000358070 VPS53Q5VIR6 699 aa6.4□□□□□ -1.38
DCX-202ENST00000358070 OS9Q13438 667 aaPredicted RBP6.4□□□□□ -1.39
DCX-202ENST00000358070 ZNF777Q9ULD5 760 aaPredicted RBP6.4□□□□□ -1.39
DCX-202ENST00000358070 ARID3CA6NKF2 412 aa6.39□□□□□ -1.39
DCX-202ENST00000358070 PABPN1Q86U42 306 aaKnown RBP eCLIP6.39□□□□□ -1.39
DCX-202ENST00000358070 CCDC97Q96F63 343 aaPredicted RBP6.38□□□□□ -1.39
DCX-202ENST00000358070 SEPT11Q9NVA2 429 aaKnown RBP6.38□□□□□ -1.39
DCX-202ENST00000358070 AMER1Q5JTC6 1135 aaPredicted RBP6.38□□□□□ -1.39
DCX-202ENST00000358070 CCAR1Q8IX12 1150 aaKnown RBP6.38□□□□□ -1.39
DCX-202ENST00000358070 KLHL34Q8N239 644 aa6.38□□□□□ -1.39
DCX-202ENST00000358070 GOLGA6L4A6NEF3 574 aa6.37□□□□□ -1.39
DCX-202ENST00000358070 USP35Q9P2H5 1018 aa6.37□□□□□ -1.39
DCX-202ENST00000358070 WDR43Q15061 677 aaKnown RBP eCLIP6.37□□□□□ -1.39
DCX-202ENST00000358070 MARCH6O60337 910 aa6.36□□□□□ -1.39
DCX-202ENST00000358070 MSH5O43196 834 aa6.36□□□□□ -1.39
DCX-202ENST00000358070 R3HCC1Q9Y3T6 440 aaKnown RBP6.36□□□□□ -1.39
DCX-202ENST00000358070 SALL2Q9Y467 1007 aaPredicted RBP6.36□□□□□ -1.39
DCX-202ENST00000358070 WWC2Q6AWC2 1192 aa6.36□□□□□ -1.39
DCX-202ENST00000358070 TPM4P67936 248 aa6.34□□□□□ -1.39
DCX-202ENST00000358070 ERICH6BQ5W0A0 696 aa6.34□□□□□ -1.39
DCX-202ENST00000358070 CCDC34Q96HJ3 373 aa6.34□□□□□ -1.39
DCX-202ENST00000358070 PPM1GO15355 546 aaPredicted RBP6.34□□□□□ -1.39
DCX-202ENST00000358070 GTF2E1P29083 439 aaPredicted RBP6.34□□□□□ -1.39
DCX-202ENST00000358070 TRIM34Q9BYJ4 488 aa6.33□□□□□ -1.4
DCX-202ENST00000358070 FRAT2O75474 233 aaPredicted RBP6.33□□□□□ -1.4
DCX-202ENST00000358070 CSRNP3Q8WYN3 585 aa6.33□□□□□ -1.4
DCX-202ENST00000358070 GOLGA6L1Q8N7Z2 621 aa6.33□□□□□ -1.4
DCX-202ENST00000358070 ZNF710Q8N1W2 664 aa6.32□□□□□ -1.4
DCX-202ENST00000358070 DRC7Q8IY82 874 aa6.32□□□□□ -1.4
DCX-202ENST00000358070 APPP05067 770 aa6.32□□□□□ -1.4
DCX-202ENST00000358070 MICAL3Q7RTP6 2002 aa6.32□□□□□ -1.4
DCX-202ENST00000358070 BECN1Q14457 450 aa6.32□□□□□ -1.4
DCX-202ENST00000358070 RASSF8Q8NHQ8 419 aa6.32□□□□□ -1.4
DCX-202ENST00000358070 TMEM87AQ8NBN3 555 aa6.31□□□□□ -1.4
DCX-202ENST00000358070 MEX3CQ5U5Q3 659 aaKnown RBP6.31□□□□□ -1.4
DCX-202ENST00000358070 ZNF330Q9Y3S2 320 aaPredicted RBP6.31□□□□□ -1.4
DCX-202ENST00000358070 CFAP44Q96MT7 982 aa6.3□□□□□ -1.4
DCX-202ENST00000358070 SPDYE4A6NLX3 237 aa6.3□□□□□ -1.4
DCX-202ENST00000358070 ODF2Q5BJF6 829 aa6.3□□□□□ -1.4
DCX-202ENST00000358070 TAF7LQ5H9L4 462 aa6.3□□□□□ -1.4
DCX-202ENST00000358070 CBX1P83916 185 aa6.29□□□□□ -1.4
DCX-202ENST00000358070 TMC1Q8TDI8 760 aa6.29□□□□□ -1.4
DCX-202ENST00000358070 CREBRFQ8IUR6 639 aa6.29□□□□□ -1.4
DCX-202ENST00000358070 MYO10Q9HD67 2058 aa6.28□□□□□ -1.4
DCX-202ENST00000358070 ABCC9O60706 1549 aa6.28□□□□□ -1.4
DCX-202ENST00000358070 TNNT3P45378 269 aaPredicted RBP6.28□□□□□ -1.4
DCX-202ENST00000358070 LAS1LQ9Y4W2 734 aaKnown RBP6.28□□□□□ -1.4
DCX-202ENST00000358070 SF3B2Q13435 895 aaKnown RBP6.28□□□□□ -1.4
DCX-202ENST00000358070 IPO9Q96P70 1041 aaKnown RBP6.28□□□□□ -1.4
DCX-202ENST00000358070 GORABQ5T7V8 394 aa6.27□□□□□ -1.41
DCX-202ENST00000358070 CCDC43Q96MW1 224 aaKnown RBP6.27□□□□□ -1.41
DCX-202ENST00000358070 SRPK2P78362 688 aaKnown RBP6.26□□□□□ -1.41
DCX-202ENST00000358070 PATL2C9JE40 543 aaKnown RBP6.26□□□□□ -1.41
DCX-202ENST00000358070 TSR1Q2NL82 804 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms