RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
SMC1B-201ENST00000357450 CREBZFQ9NS37 354 aa6.37□□□□□ -1.39
SMC1B-201ENST00000357450 APLP2Q06481 763 aa6.36□□□□□ -1.39
SMC1B-201ENST00000357450 ABCC8Q09428 1581 aa6.36□□□□□ -1.39
SMC1B-201ENST00000357450 RBM42Q9BTD8 480 aaKnown RBP6.36□□□□□ -1.39
SMC1B-201ENST00000357450 MYT1LQ9UL68 1186 aa6.34□□□□□ -1.39
SMC1B-201ENST00000357450 ATP1B4Q9UN42 357 aaPredicted RBP6.34□□□□□ -1.39
SMC1B-201ENST00000357450 SPDYE2BA6NHP3 402 aa6.34□□□□□ -1.39
SMC1B-201ENST00000357450 SPDYE6P0CI01 402 aa6.34□□□□□ -1.39
SMC1B-201ENST00000357450 SPDYE2Q495Y8 402 aa6.34□□□□□ -1.39
SMC1B-201ENST00000357450 RUSC2Q8N2Y8 1516 aa6.33□□□□□ -1.4
SMC1B-201ENST00000357450 KIF21BO75037 1637 aa6.33□□□□□ -1.4
SMC1B-201ENST00000357450 ILDR1Q86SU0 546 aaPredicted RBP6.32□□□□□ -1.4
SMC1B-201ENST00000357450 CCDC88BA6NC98 1476 aa6.31□□□□□ -1.4
SMC1B-201ENST00000357450 KDM5BQ9UGL1 1544 aa6.31□□□□□ -1.4
SMC1B-201ENST00000357450 TOP2BQ02880 1626 aa6.31□□□□□ -1.4
SMC1B-201ENST00000357450 ZBTB12Q9Y330 459 aaPredicted RBP6.3□□□□□ -1.4
SMC1B-201ENST00000357450 POTEB2H3BUK9 544 aa6.3□□□□□ -1.4
SMC1B-201ENST00000357450 POTEFA5A3E0 1075 aa6.29□□□□□ -1.4
SMC1B-201ENST00000357450 WRNQ14191 1432 aaPredicted RBP eCLIP6.28□□□□□ -1.4
SMC1B-201ENST00000357450 NPM1P06748 294 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMC1B-201ENST00000357450 CYB5RLQ6IPT4 315 aa6.26□□□□□ -1.41
SMC1B-201ENST00000357450 CHMP7Q8WUX9 453 aaPredicted RBP6.23□□□□□ -1.41
SMC1B-201ENST00000357450 CFAP43Q8NDM7 1665 aa6.21□□□□□ -1.41
SMC1B-201ENST00000357450 HMGXB3Q12766 1538 aa6.21□□□□□ -1.42
SMC1B-201ENST00000357450 DENND4BO75064 1496 aaPredicted RBP6.2□□□□□ -1.42
SMC1B-201ENST00000357450 CUX2O14529 1486 aa6.2□□□□□ -1.42
SMC1B-201ENST00000357450 CUX1P39880 1505 aa6.19□□□□□ -1.42
SMC1B-201ENST00000357450 ZNF579Q8NAF0 562 aaKnown RBP6.19□□□□□ -1.42
SMC1B-201ENST00000357450 ARID3CA6NKF2 412 aa6.18□□□□□ -1.42
SMC1B-201ENST00000357450 DNAJC5Q9H3Z4 198 aa6.18□□□□□ -1.42
SMC1B-201ENST00000357450 GABBR2O75899 941 aa6.17□□□□□ -1.42
SMC1B-201ENST00000357450 POLR1AO95602 1720 aaPredicted RBP6.17□□□□□ -1.42
SMC1B-201ENST00000357450 PELP1Q8IZL8 1130 aaKnown RBP6.16□□□□□ -1.42
SMC1B-201ENST00000357450 ABCA5Q8WWZ7 1642 aa6.14□□□□□ -1.43
SMC1B-201ENST00000357450 ATAD2BQ9ULI0 1458 aa6.14□□□□□ -1.43
SMC1B-201ENST00000357450 ASTLQ6HA08 431 aaPredicted RBP6.14□□□□□ -1.43
SMC1B-201ENST00000357450 SOGA1O94964 1423 aa6.13□□□□□ -1.43
SMC1B-201ENST00000357450 PRXQ9BXM0 1461 aa6.13□□□□□ -1.43
SMC1B-201ENST00000357450 ARAP1Q96P48 1450 aa6.13□□□□□ -1.43
SMC1B-201ENST00000357450 HRCP23327 699 aa6.13□□□□□ -1.43
SMC1B-201ENST00000357450 ARHGEF11O15085 1522 aa6.13□□□□□ -1.43
SMC1B-201ENST00000357450 SAMD9Q5K651 1589 aa6.12□□□□□ -1.43
SMC1B-201ENST00000357450 CTTNBP2Q8WZ74 1663 aa6.12□□□□□ -1.43
SMC1B-201ENST00000357450 TARBP1Q13395 1621 aaKnown RBP6.12□□□□□ -1.43
SMC1B-201ENST00000357450 MAPKBP1O60336 1514 aa6.11□□□□□ -1.43
SMC1B-201ENST00000357450 BAZ1BQ9UIG0 1483 aaKnown RBP6.11□□□□□ -1.43
SMC1B-201ENST00000357450 OTUD5Q96G74 571 aa6.1□□□□□ -1.43
SMC1B-201ENST00000357450 ERICH3Q5RHP9 1530 aa6.1□□□□□ -1.43
SMC1B-201ENST00000357450 CCDC61Q9Y6R9 512 aa6.1□□□□□ -1.43
SMC1B-201ENST00000357450 UBTFP17480 764 aaKnown RBP6.09□□□□□ -1.43
SMC1B-201ENST00000357450 PDS5BQ9NTI5 1447 aa6.09□□□□□ -1.44
SMC1B-201ENST00000357450 ARID4BQ4LE39 1312 aaPredicted RBP6.08□□□□□ -1.44
SMC1B-201ENST00000357450 CLCN6P51797 869 aa6.08□□□□□ -1.44
SMC1B-201ENST00000357450 KIF21AQ7Z4S6 1674 aa6.08□□□□□ -1.44
SMC1B-201ENST00000357450 ESF1Q9H501 851 aaKnown RBP6.07□□□□□ -1.44
SMC1B-201ENST00000357450 CC2D2AQ9P2K1 1620 aa6.07□□□□□ -1.44
SMC1B-201ENST00000357450 FARP1Q9Y4F1 1045 aaPredicted RBP6.07□□□□□ -1.44
SMC1B-201ENST00000357450 LOC105371045A0A1W2PR82 267 aa6.06□□□□□ -1.44
SMC1B-201ENST00000357450 PPARGC1BQ86YN6 1023 aaKnown RBP6.06□□□□□ -1.44
SMC1B-201ENST00000357450 KCNH8Q96L42 1107 aa6.06□□□□□ -1.44
SMC1B-201ENST00000357450 MAGI3Q5TCQ9 1506 aa6.05□□□□□ -1.44
SMC1B-201ENST00000357450 P3H3Q8IVL6 736 aa6.05□□□□□ -1.44
SMC1B-201ENST00000357450 KDM6BO15054 1643 aa6.05□□□□□ -1.44
SMC1B-201ENST00000357450 CFTRP13569 1480 aa6.04□□□□□ -1.44
SMC1B-201ENST00000357450 NCAPD3P42695 1498 aa6.04□□□□□ -1.44
SMC1B-201ENST00000357450 PBRM1Q86U86 1689 aa6.03□□□□□ -1.44
SMC1B-201ENST00000357450 NUBP1P53384 320 aa6.02□□□□□ -1.45
SMC1B-201ENST00000357450 PRKAR2AP13861 404 aaKnown RBP6.01□□□□□ -1.45
SMC1B-201ENST00000357450 CROCC2H7BZ55 1655 aa6.01□□□□□ -1.45
SMC1B-201ENST00000357450 RAPGEF2Q9Y4G8 1499 aa6.01□□□□□ -1.45
SMC1B-201ENST00000357450 SNAPC4Q5SXM2 1469 aa6.01□□□□□ -1.45
SMC1B-201ENST00000357450 E9PCH4 1651 aa6.01□□□□□ -1.45
SMC1B-201ENST00000357450 GCC2Q8IWJ2 1684 aa5.99□□□□□ -1.45
SMC1B-201ENST00000357450 NESP48681 1621 aa5.99□□□□□ -1.45
SMC1B-201ENST00000357450 MAP3K1Q13233 1512 aa5.98□□□□□ -1.45
SMC1B-201ENST00000357450 SPDYE1Q8NFV5 336 aaPredicted RBP5.98□□□□□ -1.45
SMC1B-201ENST00000357450 MLECQ14165 292 aa5.98□□□□□ -1.45
SMC1B-201ENST00000357450 BCANQ96GW7 911 aa5.98□□□□□ -1.45
SMC1B-201ENST00000357450 TDRD9Q8NDG6 1382 aaKnown RBP5.98□□□□□ -1.45
SMC1B-201ENST00000357450 CADPSQ9ULU8 1353 aa5.96□□□□□ -1.46
SMC1B-201ENST00000357450 ARHGAP35Q9NRY4 1499 aa5.96□□□□□ -1.46
SMC1B-201ENST00000357450 FAM69CQ0P6D2 419 aa5.96□□□□□ -1.46
SMC1B-201ENST00000357450 PCF11O94913 1555 aaKnown RBP5.95□□□□□ -1.46
SMC1B-201ENST00000357450 ATMINO43313 823 aaPredicted RBP5.94□□□□□ -1.46
SMC1B-201ENST00000357450 RRBP1Q9P2E9 1410 aaKnown RBP5.94□□□□□ -1.46
SMC1B-201ENST00000357450 GALR2O43603 387 aaPredicted RBP5.94□□□□□ -1.46
SMC1B-201ENST00000357450 CHADLQ6NUI6 762 aa5.94□□□□□ -1.46
SMC1B-201ENST00000357450 LAMC3Q9Y6N6 1575 aa5.94□□□□□ -1.46
SMC1B-201ENST00000357450 ADCY10Q96PN6 1610 aa5.94□□□□□ -1.46
SMC1B-201ENST00000357450 ZNF692Q9BU19 519 aaPredicted RBP5.94□□□□□ -1.46
SMC1B-201ENST00000357450 CDC42BPAQ5VT25 1732 aa5.93□□□□□ -1.46
SMC1B-201ENST00000357450 ZNF777Q9ULD5 760 aaPredicted RBP5.93□□□□□ -1.46
SMC1B-201ENST00000357450 TIAM1Q13009 1591 aa5.93□□□□□ -1.46
SMC1B-201ENST00000357450 THOC2Q8NI27 1593 aaKnown RBP5.93□□□□□ -1.46
SMC1B-201ENST00000357450 TRPC6Q9Y210 931 aa5.93□□□□□ -1.46
SMC1B-201ENST00000357450 CLIP1P30622 1438 aa5.93□□□□□ -1.46
SMC1B-201ENST00000357450 CEP162Q5TB80 1403 aa5.93□□□□□ -1.46
SMC1B-201ENST00000357450 TNIKQ9UKE5 1360 aa5.92□□□□□ -1.46
SMC1B-201ENST00000357450 CEP164Q9UPV0 1460 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms