RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 AEBP2Q6ZN18 517 aaPredicted RBP12.88□□□□□ -0.35
SMC1B-201ENST00000357450 CHIC1Q5VXU3 224 aa11.84□□□□□ -0.51
SMC1B-201ENST00000357450 PHF23Q9BUL5 403 aaPredicted RBP10.77□□□□□ -0.68
SMC1B-201ENST00000357450 SENP3Q9H4L4 574 aaPredicted RBP10.26□□□□□ -0.77
SMC1B-201ENST00000357450 FOXD1Q16676 465 aa9.96□□□□□ -0.82
SMC1B-201ENST00000357450 PPP6R1Q9UPN7 881 aa9.43□□□□□ -0.9
SMC1B-201ENST00000357450 POTEDQ86YR6 584 aa9.13□□□□□ -0.95
SMC1B-201ENST00000357450 PLPPR3Q6T4P5 718 aa9.01□□□□□ -0.97
SMC1B-201ENST00000357450 ADRA2BP18089 450 aa8.97□□□□□ -0.97
SMC1B-201ENST00000357450 MSH5O43196 834 aa8.92□□□□□ -0.98
SMC1B-201ENST00000357450 PIAS4Q8N2W9 510 aaPredicted RBP8.65□□□□□ -1.02
SMC1B-201ENST00000357450 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
SMC1B-201ENST00000357450 DMRT2Q9Y5R5 561 aa8.5□□□□□ -1.05
SMC1B-201ENST00000357450 NISCHQ9Y2I1 1504 aa8.48□□□□□ -1.05
SMC1B-201ENST00000357450 MAPK8IP2Q13387 824 aaPredicted RBP8.38□□□□□ -1.07
SMC1B-201ENST00000357450 HOXD11P31277 338 aaPredicted RBP8.37□□□□□ -1.07
SMC1B-201ENST00000357450 RNF39Q9H2S5 420 aa8.06□□□□□ -1.12
SMC1B-201ENST00000357450 RNF216Q9NWF9 866 aaPredicted RBP8.02□□□□□ -1.13
SMC1B-201ENST00000357450 PPP4R3CPQ6ZMV5 832 aa7.95□□□□□ -1.14
SMC1B-201ENST00000357450 CNKSR2Q8WXI2 1034 aa7.86□□□□□ -1.15
SMC1B-201ENST00000357450 DCAF8L2P0C7V8 631 aa7.81□□□□□ -1.16
SMC1B-201ENST00000357450 NPM3O75607 178 aaKnown RBP7.75□□□□□ -1.17
SMC1B-201ENST00000357450 SLC4A2P04920 1241 aa7.73□□□□□ -1.17
SMC1B-201ENST00000357450 SCAF1Q9H7N4 1312 aaKnown RBP7.62□□□□□ -1.19
SMC1B-201ENST00000357450 C1QBPQ07021 282 aaKnown RBP7.59□□□□□ -1.19
SMC1B-201ENST00000357450 U3KPZ7 1027 aaPredicted RBP7.55□□□□□ -1.2
SMC1B-201ENST00000357450 CCDC180Q9P1Z9 1646 aa7.52□□□□□ -1.2
SMC1B-201ENST00000357450 DSG3P32926 999 aa7.44□□□□□ -1.22
SMC1B-201ENST00000357450 KCNA4P22459 653 aa7.41□□□□□ -1.22
SMC1B-201ENST00000357450 ZCCHC6Q5VYS8 1495 aaKnown RBP7.35□□□□□ -1.23
SMC1B-201ENST00000357450 ZBTB22O15209 634 aa7.35□□□□□ -1.23
SMC1B-201ENST00000357450 EIF4G1Q04637 1599 aaKnown RBP7.29□□□□□ -1.24
SMC1B-201ENST00000357450 ATF5Q9Y2D1 282 aaPredicted RBP7.25□□□□□ -1.25
SMC1B-201ENST00000357450 SPINK5Q9NQ38 1064 aaPredicted RBP7.23□□□□□ -1.25
SMC1B-201ENST00000357450 DCAF1Q9Y4B6 1507 aa7.23□□□□□ -1.25
SMC1B-201ENST00000357450 UNC13AQ9UPW8 1703 aa7.23□□□□□ -1.25
SMC1B-201ENST00000357450 ABCC9O60706 1549 aa7.21□□□□□ -1.25
SMC1B-201ENST00000357450 MYO15BQ96JP2 1530 aa7.2□□□□□ -1.26
SMC1B-201ENST00000357450 CACNB1Q02641 598 aaPredicted RBP7.16□□□□□ -1.26
SMC1B-201ENST00000357450 NCBP3Q53F19 620 aaKnown RBP7.12□□□□□ -1.27
SMC1B-201ENST00000357450 PABPN1Q86U42 306 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMC1B-201ENST00000357450 MKRN4PQ13434 485 aaPredicted RBP6.96□□□□□ -1.29
SMC1B-201ENST00000357450 NACADO15069 1562 aa6.95□□□□□ -1.3
SMC1B-201ENST00000357450 PROM2Q8N271 834 aa6.86□□□□□ -1.31
SMC1B-201ENST00000357450 ATXN8OSP0DMR3 200 aa6.85□□□□□ -1.31
SMC1B-201ENST00000357450 FXR2P51116 673 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMC1B-201ENST00000357450 POTEHQ6S545 545 aa6.85□□□□□ -1.31
SMC1B-201ENST00000357450 MYCNP04198 464 aaPredicted RBP6.84□□□□□ -1.31
SMC1B-201ENST00000357450 SHROOM4Q9ULL8 1493 aa6.82□□□□□ -1.32
SMC1B-201ENST00000357450 BICRAQ9NZM4 1560 aa6.81□□□□□ -1.32
SMC1B-201ENST00000357450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMC1B-201ENST00000357450 RB1CC1Q8TDY2 1594 aa6.79□□□□□ -1.32
SMC1B-201ENST00000357450 SSUH2Q9Y2M2 353 aa6.76□□□□□ -1.33
SMC1B-201ENST00000357450 PEG3Q9GZU2 1588 aa6.76□□□□□ -1.33
SMC1B-201ENST00000357450 FOXD4L1Q9NU39 408 aa6.75□□□□□ -1.33
SMC1B-201ENST00000357450 ZNF219Q9P2Y4 722 aaPredicted RBP6.73□□□□□ -1.33
SMC1B-201ENST00000357450 WIZO95785 1651 aa6.73□□□□□ -1.33
SMC1B-201ENST00000357450 EVX2Q03828 476 aa6.71□□□□□ -1.33
SMC1B-201ENST00000357450 SAMD1Q6SPF0 538 aaPredicted RBP6.7□□□□□ -1.34
SMC1B-201ENST00000357450 SCRIBQ14160 1630 aa6.69□□□□□ -1.34
SMC1B-201ENST00000357450 BAZ1AQ9NRL2 1556 aaPredicted RBP6.69□□□□□ -1.34
SMC1B-201ENST00000357450 DCAF8L1A6NGE4 600 aa6.66□□□□□ -1.34
SMC1B-201ENST00000357450 MNX1P50219 401 aaPredicted RBP6.66□□□□□ -1.34
SMC1B-201ENST00000357450 CSRNP3Q8WYN3 585 aa6.65□□□□□ -1.35
SMC1B-201ENST00000357450 MROH2BQ7Z745 1585 aa6.64□□□□□ -1.35
SMC1B-201ENST00000357450 PRDM2Q13029 1718 aa6.64□□□□□ -1.35
SMC1B-201ENST00000357450 PIP4P2Q8N4L2 257 aa6.63□□□□□ -1.35
SMC1B-201ENST00000357450 TRIM41Q8WV44 630 aa6.62□□□□□ -1.35
SMC1B-201ENST00000357450 RSF1Q96T23 1441 aaPredicted RBP6.62□□□□□ -1.35
SMC1B-201ENST00000357450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.61□□□□□ -1.35
SMC1B-201ENST00000357450 HNRNPUL2Q1KMD3 747 aaKnown RBP6.61□□□□□ -1.35
SMC1B-201ENST00000357450 POLA2Q14181 598 aa6.61□□□□□ -1.35
SMC1B-201ENST00000357450 AKT1S1Q96B36 256 aa6.61□□□□□ -1.35
SMC1B-201ENST00000357450 SUPT5HO00267 1087 aaKnown RBP6.6□□□□□ -1.35
SMC1B-201ENST00000357450 LRRIQ1Q96JM4 1722 aa6.6□□□□□ -1.35
SMC1B-201ENST00000357450 SMARCA2P51531 1590 aa6.59□□□□□ -1.35
SMC1B-201ENST00000357450 REM2Q8IYK8 340 aaPredicted RBP6.59□□□□□ -1.35
SMC1B-201ENST00000357450 CECR2Q9BXF3 1484 aa6.59□□□□□ -1.35
SMC1B-201ENST00000357450 C19orf67A6NJJ6 358 aa6.57□□□□□ -1.36
SMC1B-201ENST00000357450 FBLN2P98095 1184 aa6.57□□□□□ -1.36
SMC1B-201ENST00000357450 SMARCA4P51532 1647 aa6.56□□□□□ -1.36
SMC1B-201ENST00000357450 TTBK1Q5TCY1 1321 aaPredicted RBP6.56□□□□□ -1.36
SMC1B-201ENST00000357450 PITPNM1O00562 1244 aa6.55□□□□□ -1.36
SMC1B-201ENST00000357450 POTEIP0CG38 1075 aa6.55□□□□□ -1.36
SMC1B-201ENST00000357450 SLC4A1APQ9BWU0 796 aaKnown RBP6.54□□□□□ -1.36
SMC1B-201ENST00000357450 CHRDL2Q6WN34 429 aa6.52□□□□□ -1.37
SMC1B-201ENST00000357450 ABCB7O75027 752 aa6.52□□□□□ -1.37
SMC1B-201ENST00000357450 BIVM-ERCC5R4GMW8 1640 aa6.5□□□□□ -1.37
SMC1B-201ENST00000357450 TRHP20396 242 aaPredicted RBP6.5□□□□□ -1.37
SMC1B-201ENST00000357450 CAPN15O75808 1086 aa6.5□□□□□ -1.37
SMC1B-201ENST00000357450 WDR97A6NE52 1622 aa6.49□□□□□ -1.37
SMC1B-201ENST00000357450 EHMT2Q96KQ7 1210 aa6.48□□□□□ -1.37
SMC1B-201ENST00000357450 TOP2AP11388 1531 aaKnown RBP6.46□□□□□ -1.38
SMC1B-201ENST00000357450 SP7Q8TDD2 431 aaPredicted RBP6.45□□□□□ -1.38
SMC1B-201ENST00000357450 SYNJ1O43426 1573 aa6.44□□□□□ -1.38
SMC1B-201ENST00000357450 ERCC6Q03468 1493 aa6.44□□□□□ -1.38
SMC1B-201ENST00000357450 OSCARQ8IYS5 282 aa6.44□□□□□ -1.38
SMC1B-201ENST00000357450 FAM9AQ8IZU1 332 aaPredicted RBP6.42□□□□□ -1.38
SMC1B-201ENST00000357450 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
SMC1B-201ENST00000357450 POTEJP0CG39 1038 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms