RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
SH3PXD2A-202ENST00000355946 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
SH3PXD2A-202ENST00000355946 BECN1Q14457 450 aa11.1□□□□□ -0.63
SH3PXD2A-202ENST00000355946 TNNT2P45379 298 aaPredicted RBP11.1□□□□□ -0.63
SH3PXD2A-202ENST00000355946 FKBP8Q14318 412 aa11.1□□□□□ -0.63
SH3PXD2A-202ENST00000355946 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
SH3PXD2A-202ENST00000355946 NACADO15069 1562 aa11.09□□□□□ -0.63
SH3PXD2A-202ENST00000355946 TMC1Q8TDI8 760 aa11.09□□□□□ -0.63
SH3PXD2A-202ENST00000355946 EIF4G2P78344 907 aaKnown RBP eCLIP11.08□□□□□ -0.64
SH3PXD2A-202ENST00000355946 ANP32EQ9BTT0 268 aa11.07□□□□□ -0.64
SH3PXD2A-202ENST00000355946 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
SH3PXD2A-202ENST00000355946 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
SH3PXD2A-202ENST00000355946 DCAF1Q9Y4B6 1507 aa11.06□□□□□ -0.64
SH3PXD2A-202ENST00000355946 TSPY4P0CV99 314 aa11.05□□□□□ -0.64
SH3PXD2A-202ENST00000355946 TSPY10P0CW01 314 aa11.05□□□□□ -0.64
SH3PXD2A-202ENST00000355946 PRM3Q9NNZ6 103 aa11.05□□□□□ -0.64
SH3PXD2A-202ENST00000355946 FAM9BQ8IZU0 186 aa11.05□□□□□ -0.64
SH3PXD2A-202ENST00000355946 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
SH3PXD2A-202ENST00000355946 NRDCO43847 1150 aa11.04□□□□□ -0.64
SH3PXD2A-202ENST00000355946 HNRNPUQ00839 825 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■□□□ 12.3
SH3PXD2A-202ENST00000355946 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
SH3PXD2A-202ENST00000355946 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
SH3PXD2A-202ENST00000355946 FGD1P98174 961 aa11.03□□□□□ -0.64
SH3PXD2A-202ENST00000355946 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.64
SH3PXD2A-202ENST00000355946 TMX4Q9H1E5 349 aaPredicted RBP11.02□□□□□ -0.65
SH3PXD2A-202ENST00000355946 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.65
SH3PXD2A-202ENST00000355946 KRI1Q8N9T8 703 aaKnown RBP11.01□□□□□ -0.65
SH3PXD2A-202ENST00000355946 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
SH3PXD2A-202ENST00000355946 OS9Q13438 667 aaPredicted RBP11.01□□□□□ -0.65
SH3PXD2A-202ENST00000355946 SENP3Q9H4L4 574 aaPredicted RBP11□□□□□ -0.65
SH3PXD2A-202ENST00000355946 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
SH3PXD2A-202ENST00000355946 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
SH3PXD2A-202ENST00000355946 DDRGK1Q96HY6 314 aa10.99□□□□□ -0.65
SH3PXD2A-202ENST00000355946 TAOK2Q9UL54 1235 aa10.98□□□□□ -0.65
SH3PXD2A-202ENST00000355946 KIAA2012Q0VF49 1180 aa10.98□□□□□ -0.65
SH3PXD2A-202ENST00000355946 DNTTIP2Q5QJE6 756 aaKnown RBP10.98□□□□□ -0.65
SH3PXD2A-202ENST00000355946 MYO15BQ96JP2 1530 aa10.98□□□□□ -0.65
SH3PXD2A-202ENST00000355946 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.65
SH3PXD2A-202ENST00000355946 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.65
SH3PXD2A-202ENST00000355946 CDCA8Q53HL2 280 aa10.96□□□□□ -0.66
SH3PXD2A-202ENST00000355946 CHMP4BQ9H444 224 aaKnown RBP10.96□□□□□ -0.66
SH3PXD2A-202ENST00000355946 CHAF1AQ13111 956 aaPredicted RBP10.96□□□□□ -0.66
SH3PXD2A-202ENST00000355946 KCNJ4P48050 445 aa10.95□□□□□ -0.66
SH3PXD2A-202ENST00000355946 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
SH3PXD2A-202ENST00000355946 MAPK8IP3Q9UPT6 1336 aa10.95□□□□□ -0.66
SH3PXD2A-202ENST00000355946 NOC3LQ8WTT2 800 aaKnown RBP10.93□□□□□ -0.66
SH3PXD2A-202ENST00000355946 CHIC2Q9UKJ5 165 aa10.93□□□□□ -0.66
SH3PXD2A-202ENST00000355946 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
SH3PXD2A-202ENST00000355946 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
SH3PXD2A-202ENST00000355946 GNL2Q13823 731 aaKnown RBP10.92□□□□□ -0.66
SH3PXD2A-202ENST00000355946 MROH2BQ7Z745 1585 aa10.91□□□□□ -0.66
SH3PXD2A-202ENST00000355946 POGKQ9P215 609 aa10.91□□□□□ -0.66
SH3PXD2A-202ENST00000355946 PNNQ9H307 717 aaKnown RBP10.91□□□□□ -0.66
SH3PXD2A-202ENST00000355946 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
SH3PXD2A-202ENST00000355946 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.66
SH3PXD2A-202ENST00000355946 KCNH8Q96L42 1107 aa10.9□□□□□ -0.67
SH3PXD2A-202ENST00000355946 GOLGA6L4A6NEF3 574 aa10.89□□□□□ -0.67
SH3PXD2A-202ENST00000355946 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
SH3PXD2A-202ENST00000355946 LAS1LQ9Y4W2 734 aaKnown RBP10.89□□□□□ -0.67
SH3PXD2A-202ENST00000355946 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
SH3PXD2A-202ENST00000355946 IRX6P78412 446 aaPredicted RBP10.88□□□□□ -0.67
SH3PXD2A-202ENST00000355946 HDGFP51858 240 aaKnown RBP10.87□□□□□ -0.67
SH3PXD2A-202ENST00000355946 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
SH3PXD2A-202ENST00000355946 NAP1L5Q96NT1 182 aaPredicted RBP10.84□□□□□ -0.67
SH3PXD2A-202ENST00000355946 DDX10Q13206 875 aaKnown RBP10.84□□□□□ -0.67
SH3PXD2A-202ENST00000355946 MCCP23508 829 aa10.84□□□□□ -0.67
SH3PXD2A-202ENST00000355946 PLCB2Q00722 1185 aa10.84□□□□□ -0.67
SH3PXD2A-202ENST00000355946 MS4A1P11836 297 aa10.83□□□□□ -0.67
SH3PXD2A-202ENST00000355946 KANK1Q14678 1352 aa10.83□□□□□ -0.68
SH3PXD2A-202ENST00000355946 G3V3G9 751 aa10.83□□□□□ -0.68
SH3PXD2A-202ENST00000355946 DCAF8Q5TAQ9 597 aa10.83□□□□□ -0.68
SH3PXD2A-202ENST00000355946 PLEKHD1A6NEE1 506 aa10.83□□□□□ -0.68
SH3PXD2A-202ENST00000355946 HSP90AB1P08238 724 aaKnown RBP10.8□□□□□ -0.68
SH3PXD2A-202ENST00000355946 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
SH3PXD2A-202ENST00000355946 DRC7Q8IY82 874 aa10.8□□□□□ -0.68
SH3PXD2A-202ENST00000355946 BAZ1AQ9NRL2 1556 aaPredicted RBP10.79□□□□□ -0.68
SH3PXD2A-202ENST00000355946 A0A0U1RQG5 324 aaPredicted RBP10.78□□□□□ -0.68
SH3PXD2A-202ENST00000355946 BAZ1BQ9UIG0 1483 aaKnown RBP10.78□□□□□ -0.68
SH3PXD2A-202ENST00000355946 WIZO95785 1651 aa10.77□□□□□ -0.68
SH3PXD2A-202ENST00000355946 CCDC34Q96HJ3 373 aa10.77□□□□□ -0.68
SH3PXD2A-202ENST00000355946 CCDC9Q9Y3X0 531 aaKnown RBP10.77□□□□□ -0.69
SH3PXD2A-202ENST00000355946 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
SH3PXD2A-202ENST00000355946 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
SH3PXD2A-202ENST00000355946 CNKSR2Q8WXI2 1034 aa10.75□□□□□ -0.69
SH3PXD2A-202ENST00000355946 RTF1Q92541 710 aaKnown RBP10.75□□□□□ -0.69
SH3PXD2A-202ENST00000355946 CSB-PGBD3P0DP91 1061 aa10.75□□□□□ -0.69
SH3PXD2A-202ENST00000355946 KIAA1211Q6ZU35 1233 aa10.75□□□□□ -0.69
SH3PXD2A-202ENST00000355946 DCAF8L1A6NGE4 600 aa10.74□□□□□ -0.69
SH3PXD2A-202ENST00000355946 RGL3Q3MIN7 710 aa10.74□□□□□ -0.69
SH3PXD2A-202ENST00000355946 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
SH3PXD2A-202ENST00000355946 CEP89Q96ST8 783 aa10.74□□□□□ -0.69
SH3PXD2A-202ENST00000355946 VPS53Q5VIR6 699 aa10.74□□□□□ -0.69
SH3PXD2A-202ENST00000355946 ERICH6BQ5W0A0 696 aa10.74□□□□□ -0.69
SH3PXD2A-202ENST00000355946 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
SH3PXD2A-202ENST00000355946 U2SURPO15042 1029 aaKnown RBP10.73□□□□□ -0.69
SH3PXD2A-202ENST00000355946 HTATSF1O43719 755 aaKnown RBP10.73□□□□□ -0.69
SH3PXD2A-202ENST00000355946 CCDC88BA6NC98 1476 aa10.73□□□□□ -0.69
SH3PXD2A-202ENST00000355946 HSCBQ8IWL3 235 aa10.72□□□□□ -0.69
SH3PXD2A-202ENST00000355946 GPATCH3Q96I76 525 aa10.72□□□□□ -0.69
SH3PXD2A-202ENST00000355946 USP35Q9P2H5 1018 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms