RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 A0A0G2JS52 829 aa19.57■□□□□ 0.72
LMX1B-201ENST00000355497 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
LMX1B-201ENST00000355497 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
LMX1B-201ENST00000355497 TSPY4P0CV99 314 aa19.52■□□□□ 0.72
LMX1B-201ENST00000355497 TSPY10P0CW01 314 aa19.52■□□□□ 0.72
LMX1B-201ENST00000355497 CASC1Q6TDU7 716 aa19.52■□□□□ 0.72
LMX1B-201ENST00000355497 DNTTIP2Q5QJE6 756 aaKnown RBP19.52■□□□□ 0.72
LMX1B-201ENST00000355497 MIER1Q8N108 512 aa19.51■□□□□ 0.71
LMX1B-201ENST00000355497 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
LMX1B-201ENST00000355497 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
LMX1B-201ENST00000355497 PPM1GO15355 546 aaPredicted RBP19.45■□□□□ 0.7
LMX1B-201ENST00000355497 HIRIP3Q9BW71 556 aaPredicted RBP19.45■□□□□ 0.7
LMX1B-201ENST00000355497 ERICH6BQ5W0A0 696 aa19.44■□□□□ 0.7
LMX1B-201ENST00000355497 TPRNQ4KMQ1 711 aa19.43■□□□□ 0.7
LMX1B-201ENST00000355497 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
LMX1B-201ENST00000355497 NAP1L5Q96NT1 182 aaPredicted RBP19.42■□□□□ 0.7
LMX1B-201ENST00000355497 CFAP53Q96M91 514 aa19.42■□□□□ 0.7
LMX1B-201ENST00000355497 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
LMX1B-201ENST00000355497 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
LMX1B-201ENST00000355497 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
LMX1B-201ENST00000355497 TULP1O00294 542 aaPredicted RBP19.38■□□□□ 0.69
LMX1B-201ENST00000355497 GOLGA6L6A8MZA4 724 aa19.37■□□□□ 0.69
LMX1B-201ENST00000355497 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
LMX1B-201ENST00000355497 PLCB2Q00722 1185 aa19.31■□□□□ 0.68
LMX1B-201ENST00000355497 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
LMX1B-201ENST00000355497 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
LMX1B-201ENST00000355497 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
LMX1B-201ENST00000355497 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
LMX1B-201ENST00000355497 SUPT16HQ9Y5B9 1047 aaKnown RBP19.28■□□□□ 0.68
LMX1B-201ENST00000355497 HSP90AB1P08238 724 aaKnown RBP19.27■□□□□ 0.68
LMX1B-201ENST00000355497 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
LMX1B-201ENST00000355497 MAPK8IP3Q9UPT6 1336 aa19.26■□□□□ 0.67
LMX1B-201ENST00000355497 RTN4Q9NQC3 1192 aaKnown RBP19.26■□□□□ 0.67
LMX1B-201ENST00000355497 NRDCO43847 1150 aa19.25■□□□□ 0.67
LMX1B-201ENST00000355497 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
LMX1B-201ENST00000355497 SENP3-EIF4A1A0A087X0R7 540 aa19.23■□□□□ 0.67
LMX1B-201ENST00000355497 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
LMX1B-201ENST00000355497 RGS3P49796 1198 aa19.23■□□□□ 0.67
LMX1B-201ENST00000355497 PPP4R2Q9NY27 417 aa19.23■□□□□ 0.67
LMX1B-201ENST00000355497 RGL3Q3MIN7 710 aa19.22■□□□□ 0.67
LMX1B-201ENST00000355497 TAOK2Q9UL54 1235 aa19.22■□□□□ 0.67
LMX1B-201ENST00000355497 CLIP1P30622 1438 aa19.2■□□□□ 0.66
LMX1B-201ENST00000355497 FGD1P98174 961 aa19.2■□□□□ 0.66
LMX1B-201ENST00000355497 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
LMX1B-201ENST00000355497 NEUROD2Q15784 382 aa19.2■□□□□ 0.66
LMX1B-201ENST00000355497 NUDCQ9Y266 331 aa19.2■□□□□ 0.66
LMX1B-201ENST00000355497 CHAF1AQ13111 956 aaPredicted RBP19.19■□□□□ 0.66
LMX1B-201ENST00000355497 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
LMX1B-201ENST00000355497 OS9Q13438 667 aaPredicted RBP19.19■□□□□ 0.66
LMX1B-201ENST00000355497 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
LMX1B-201ENST00000355497 FRAT1Q92837 279 aaPredicted RBP19.18■□□□□ 0.66
LMX1B-201ENST00000355497 MS4A1P11836 297 aa19.17■□□□□ 0.66
LMX1B-201ENST00000355497 CARD11Q9BXL7 1154 aa19.17■□□□□ 0.66
LMX1B-201ENST00000355497 AMER1Q5JTC6 1135 aaPredicted RBP19.16■□□□□ 0.66
LMX1B-201ENST00000355497 KCNJ4P48050 445 aa19.15■□□□□ 0.66
LMX1B-201ENST00000355497 NAP1L2Q9ULW6 460 aaPredicted RBP19.15■□□□□ 0.66
LMX1B-201ENST00000355497 GOLGA6L4A6NEF3 574 aa19.14■□□□□ 0.65
LMX1B-201ENST00000355497 HSCBQ8IWL3 235 aa19.13■□□□□ 0.65
LMX1B-201ENST00000355497 KCNH8Q96L42 1107 aa19.13■□□□□ 0.65
LMX1B-201ENST00000355497 MSNP26038 577 aaKnown RBP19.12■□□□□ 0.65
LMX1B-201ENST00000355497 L1TD1Q5T7N2 865 aaKnown RBP19.12■□□□□ 0.65
LMX1B-201ENST00000355497 NPHP1O15259 732 aa19.11■□□□□ 0.65
LMX1B-201ENST00000355497 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
LMX1B-201ENST00000355497 PNNQ9H307 717 aaKnown RBP19.08■□□□□ 0.64
LMX1B-201ENST00000355497 GOLGA2Q08379 1002 aa19.07■□□□□ 0.64
LMX1B-201ENST00000355497 DRC7Q8IY82 874 aa19.07■□□□□ 0.64
LMX1B-201ENST00000355497 MCCP23508 829 aa19.06■□□□□ 0.64
LMX1B-201ENST00000355497 POGKQ9P215 609 aa19.05■□□□□ 0.64
LMX1B-201ENST00000355497 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
LMX1B-201ENST00000355497 ARID4BQ4LE39 1312 aaPredicted RBP19.04■□□□□ 0.64
LMX1B-201ENST00000355497 CC2D1BQ5T0F9 858 aaKnown RBP19.03■□□□□ 0.64
LMX1B-201ENST00000355497 U2SURPO15042 1029 aaKnown RBP19.03■□□□□ 0.64
LMX1B-201ENST00000355497 CLSTN1O94985 981 aa19.02■□□□□ 0.64
LMX1B-201ENST00000355497 LMOD2Q6P5Q4 547 aa19.02■□□□□ 0.64
LMX1B-201ENST00000355497 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.63
LMX1B-201ENST00000355497 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
LMX1B-201ENST00000355497 B4GALNT3Q6L9W6 998 aa19■□□□□ 0.63
LMX1B-201ENST00000355497 CFDP1Q9UEE9 299 aaPredicted RBP19■□□□□ 0.63
LMX1B-201ENST00000355497 CFAP44Q96MT7 982 aa19■□□□□ 0.63
LMX1B-201ENST00000355497 SPRYD3Q8NCJ5 442 aa18.97■□□□□ 0.63
LMX1B-201ENST00000355497 DEKP35659 375 aaKnown RBP18.96■□□□□ 0.63
LMX1B-201ENST00000355497 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
LMX1B-201ENST00000355497 PTMSP20962 102 aa18.94■□□□□ 0.62
LMX1B-201ENST00000355497 GNL2Q13823 731 aaKnown RBP18.94■□□□□ 0.62
LMX1B-201ENST00000355497 KIAA2012Q0VF49 1180 aa18.93■□□□□ 0.62
LMX1B-201ENST00000355497 TMF1P82094 1093 aa18.91■□□□□ 0.62
LMX1B-201ENST00000355497 EEA1Q15075 1411 aa18.91■□□□□ 0.62
LMX1B-201ENST00000355497 GBP4Q96PP9 640 aa18.88■□□□□ 0.61
LMX1B-201ENST00000355497 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
LMX1B-201ENST00000355497 ISY1Q9ULR0 285 aaKnown RBP18.87■□□□□ 0.61
LMX1B-201ENST00000355497 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
LMX1B-201ENST00000355497 NOC3LQ8WTT2 800 aaKnown RBP18.85■□□□□ 0.61
LMX1B-201ENST00000355497 KIAA1211Q6ZU35 1233 aa18.85■□□□□ 0.61
LMX1B-201ENST00000355497 MORC1Q86VD1 984 aa18.83■□□□□ 0.61
LMX1B-201ENST00000355497 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
LMX1B-201ENST00000355497 TNNT3P45378 269 aaPredicted RBP18.83■□□□□ 0.6
LMX1B-201ENST00000355497 RTF1Q92541 710 aaKnown RBP18.82■□□□□ 0.6
LMX1B-201ENST00000355497 SYAP1Q96A49 352 aaPredicted RBP18.8■□□□□ 0.6
LMX1B-201ENST00000355497 IPO8O15397 1037 aaKnown RBP18.8■□□□□ 0.6
LMX1B-201ENST00000355497 TPM4P67936 248 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms