RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 FGD1P98174 961 aa15.18■□□□□ 0.02
NUDCD3-202ENST00000355451 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
NUDCD3-202ENST00000355451 TMX4Q9H1E5 349 aaPredicted RBP15.17■□□□□ 0.02
NUDCD3-202ENST00000355451 NOC3LQ8WTT2 800 aaKnown RBP15.17■□□□□ 0.02
NUDCD3-202ENST00000355451 NBR1Q14596 966 aa15.16■□□□□ 0.02
NUDCD3-202ENST00000355451 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
NUDCD3-202ENST00000355451 KIAA2012Q0VF49 1180 aa15.14■□□□□ 0.01
NUDCD3-202ENST00000355451 P3H3Q8IVL6 736 aa15.14■□□□□ 0.01
NUDCD3-202ENST00000355451 PLCB2Q00722 1185 aa15.12■□□□□ 0.01
NUDCD3-202ENST00000355451 FKBP8Q14318 412 aa15.12■□□□□ 0.01
NUDCD3-202ENST00000355451 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
NUDCD3-202ENST00000355451 L1TD1Q5T7N2 865 aaKnown RBP15.11■□□□□ 0.01
NUDCD3-202ENST00000355451 NRDCO43847 1150 aa15.1■□□□□ 0.01
NUDCD3-202ENST00000355451 PDE4CQ08493 712 aa15.1■□□□□ 0.01
NUDCD3-202ENST00000355451 PNNQ9H307 717 aaKnown RBP15.1■□□□□ 0.01
NUDCD3-202ENST00000355451 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
NUDCD3-202ENST00000355451 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
NUDCD3-202ENST00000355451 FAM9BQ8IZU0 186 aa15.08■□□□□ 0
NUDCD3-202ENST00000355451 OS9Q13438 667 aaPredicted RBP15.08■□□□□ 0
NUDCD3-202ENST00000355451 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
NUDCD3-202ENST00000355451 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
NUDCD3-202ENST00000355451 KCNJ4P48050 445 aa15.06■□□□□ 0
NUDCD3-202ENST00000355451 BECN1Q14457 450 aa15.06■□□□□ 0
NUDCD3-202ENST00000355451 CHAF1AQ13111 956 aaPredicted RBP15.06■□□□□ 0
NUDCD3-202ENST00000355451 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ 0
NUDCD3-202ENST00000355451 CCDC136Q96JN2 1154 aa15.04■□□□□ -0
NUDCD3-202ENST00000355451 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
NUDCD3-202ENST00000355451 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
NUDCD3-202ENST00000355451 A0A0U1RQG5 324 aaPredicted RBP15.01□□□□□ -0.01
NUDCD3-202ENST00000355451 G3V3G9 751 aa15.01□□□□□ -0.01
NUDCD3-202ENST00000355451 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
NUDCD3-202ENST00000355451 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.01□□□□□ -0.01
NUDCD3-202ENST00000355451 GNL2Q13823 731 aaKnown RBP15□□□□□ -0.01
NUDCD3-202ENST00000355451 ANO8Q9HCE9 1232 aaPredicted RBP15□□□□□ -0.01
NUDCD3-202ENST00000355451 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
NUDCD3-202ENST00000355451 LAS1LQ9Y4W2 734 aaKnown RBP14.98□□□□□ -0.01
NUDCD3-202ENST00000355451 HNRNPUQ00839 825 aaKnown RBP eCLIP14.98□□□□□ -0.01
NUDCD3-202ENST00000355451 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.02
NUDCD3-202ENST00000355451 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
NUDCD3-202ENST00000355451 GOLGA6L4A6NEF3 574 aa14.95□□□□□ -0.02
NUDCD3-202ENST00000355451 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
NUDCD3-202ENST00000355451 FTSJ3Q8IY81 847 aaKnown RBP14.94□□□□□ -0.02
NUDCD3-202ENST00000355451 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
NUDCD3-202ENST00000355451 ERICH6BQ5W0A0 696 aa14.92□□□□□ -0.02
NUDCD3-202ENST00000355451 DRC7Q8IY82 874 aa14.91□□□□□ -0.02
NUDCD3-202ENST00000355451 CEP89Q96ST8 783 aa14.91□□□□□ -0.02
NUDCD3-202ENST00000355451 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
NUDCD3-202ENST00000355451 WWC1Q8IX03 1113 aa14.89□□□□□ -0.03
NUDCD3-202ENST00000355451 VPS53Q5VIR6 699 aa14.87□□□□□ -0.03
NUDCD3-202ENST00000355451 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
NUDCD3-202ENST00000355451 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
NUDCD3-202ENST00000355451 ZNF330Q9Y3S2 320 aaPredicted RBP14.83□□□□□ -0.03
NUDCD3-202ENST00000355451 TSPY4P0CV99 314 aa14.82□□□□□ -0.04
NUDCD3-202ENST00000355451 TSPY10P0CW01 314 aa14.82□□□□□ -0.04
NUDCD3-202ENST00000355451 NAP1L5Q96NT1 182 aaPredicted RBP14.82□□□□□ -0.04
NUDCD3-202ENST00000355451 CWC22Q9HCG8 908 aaKnown RBP14.79□□□□□ -0.04
NUDCD3-202ENST00000355451 HSP90AB1P08238 724 aaKnown RBP14.79□□□□□ -0.04
NUDCD3-202ENST00000355451 MAPK8IP3Q9UPT6 1336 aa14.79□□□□□ -0.04
NUDCD3-202ENST00000355451 TCEAL9Q9UHQ7 104 aa14.77□□□□□ -0.05
NUDCD3-202ENST00000355451 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
NUDCD3-202ENST00000355451 POGKQ9P215 609 aa14.76□□□□□ -0.05
NUDCD3-202ENST00000355451 RASSF8Q8NHQ8 419 aa14.76□□□□□ -0.05
NUDCD3-202ENST00000355451 AEBP2Q6ZN18 517 aaPredicted RBP14.75□□□□□ -0.05
NUDCD3-202ENST00000355451 SOX12O15370 315 aa14.75□□□□□ -0.05
NUDCD3-202ENST00000355451 KCNH8Q96L42 1107 aa14.75□□□□□ -0.05
NUDCD3-202ENST00000355451 CHIC2Q9UKJ5 165 aa14.75□□□□□ -0.05
NUDCD3-202ENST00000355451 CREBRFQ8IUR6 639 aa14.74□□□□□ -0.05
NUDCD3-202ENST00000355451 GOLGA6L1Q8N7Z2 621 aa14.73□□□□□ -0.05
NUDCD3-202ENST00000355451 MARCH6O60337 910 aa14.73□□□□□ -0.05
NUDCD3-202ENST00000355451 MRS2Q9HD23 443 aa14.72□□□□□ -0.05
NUDCD3-202ENST00000355451 MCCP23508 829 aa14.71□□□□□ -0.05
NUDCD3-202ENST00000355451 NEUROD2Q15784 382 aa14.71□□□□□ -0.06
NUDCD3-202ENST00000355451 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.06
NUDCD3-202ENST00000355451 MSH5O43196 834 aa14.69□□□□□ -0.06
NUDCD3-202ENST00000355451 DDX10Q13206 875 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-202ENST00000355451 CHMP4BQ9H444 224 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-202ENST00000355451 CSB-PGBD3P0DP91 1061 aa14.68□□□□□ -0.06
NUDCD3-202ENST00000355451 TAF7LQ5H9L4 462 aa14.68□□□□□ -0.06
NUDCD3-202ENST00000355451 NUDCQ9Y266 331 aa14.68□□□□□ -0.06
NUDCD3-202ENST00000355451 GORABQ5T7V8 394 aa14.68□□□□□ -0.06
NUDCD3-202ENST00000355451 FRAT2O75474 233 aaPredicted RBP14.68□□□□□ -0.06
NUDCD3-202ENST00000355451 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
NUDCD3-202ENST00000355451 TNNT3P45378 269 aaPredicted RBP14.67□□□□□ -0.06
NUDCD3-202ENST00000355451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.67□□□□□ -0.063e-6■■■■■ 71.9
NUDCD3-202ENST00000355451 CCDC34Q96HJ3 373 aa14.67□□□□□ -0.06
NUDCD3-202ENST00000355451 CALRP27797 417 aaKnown RBP14.66□□□□□ -0.06
NUDCD3-202ENST00000355451 CHMP3Q9Y3E7 222 aa14.66□□□□□ -0.06
NUDCD3-202ENST00000355451 CHMP7Q8WUX9 453 aaPredicted RBP14.65□□□□□ -0.06
NUDCD3-202ENST00000355451 MSNP26038 577 aaKnown RBP14.65□□□□□ -0.06
NUDCD3-202ENST00000355451 GTF2E1P29083 439 aaPredicted RBP14.65□□□□□ -0.06
NUDCD3-202ENST00000355451 KNSTRNQ9Y448 316 aa14.65□□□□□ -0.06
NUDCD3-202ENST00000355451 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
NUDCD3-202ENST00000355451 KIAA1211Q6ZU35 1233 aa14.65□□□□□ -0.06
NUDCD3-202ENST00000355451 USP35Q9P2H5 1018 aa14.64□□□□□ -0.07
NUDCD3-202ENST00000355451 TPM4P67936 248 aa14.64□□□□□ -0.07
NUDCD3-202ENST00000355451 PATL2C9JE40 543 aaKnown RBP14.64□□□□□ -0.07
NUDCD3-202ENST00000355451 TRIM34Q9BYJ4 488 aa14.64□□□□□ -0.07
NUDCD3-202ENST00000355451 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
NUDCD3-202ENST00000355451 HSP90B1P14625 803 aaKnown RBP14.63□□□□□ -0.07
NUDCD3-202ENST00000355451 U2SURPO15042 1029 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms