RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
AP3D1-201ENST00000345016 RRP7BPQ9NSQ0 103 aa22.04■■□□□ 1.12
AP3D1-201ENST00000345016 PPP4R2Q9NY27 417 aa22.04■■□□□ 1.12
AP3D1-201ENST00000345016 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
AP3D1-201ENST00000345016 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
AP3D1-201ENST00000345016 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
AP3D1-201ENST00000345016 NOP58Q9Y2X3 529 aaKnown RBP22■■□□□ 1.11
AP3D1-201ENST00000345016 ERICH6BQ5W0A0 696 aa22■■□□□ 1.11
AP3D1-201ENST00000345016 TSPY4P0CV99 314 aa21.99■■□□□ 1.11
AP3D1-201ENST00000345016 TSPY10P0CW01 314 aa21.99■■□□□ 1.11
AP3D1-201ENST00000345016 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
AP3D1-201ENST00000345016 B4GALNT3Q6L9W6 998 aa21.96■■□□□ 1.11
AP3D1-201ENST00000345016 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
AP3D1-201ENST00000345016 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
AP3D1-201ENST00000345016 MYH16Q9H6N6 1097 aa21.92■■□□□ 1.1
AP3D1-201ENST00000345016 GOLGA6L22H0YM25 854 aa21.91■■□□□ 1.1
AP3D1-201ENST00000345016 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
AP3D1-201ENST00000345016 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
AP3D1-201ENST00000345016 DEKP35659 375 aaKnown RBP21.86■■□□□ 1.09
AP3D1-201ENST00000345016 RGS3P49796 1198 aa21.86■■□□□ 1.09
AP3D1-201ENST00000345016 NAP1L5Q96NT1 182 aaPredicted RBP21.85■■□□□ 1.09
AP3D1-201ENST00000345016 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
AP3D1-201ENST00000345016 RGL3Q3MIN7 710 aa21.82■■□□□ 1.08
AP3D1-201ENST00000345016 ESF1Q9H501 851 aaKnown RBP21.82■■□□□ 1.08
AP3D1-201ENST00000345016 EEA1Q15075 1411 aa21.8■■□□□ 1.08
AP3D1-201ENST00000345016 PTMAP06454 111 aaKnown RBP21.79■■□□□ 1.08
AP3D1-201ENST00000345016 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
AP3D1-201ENST00000345016 TNNT2P45379 298 aaPredicted RBP21.76■■□□□ 1.07
AP3D1-201ENST00000345016 DNTTIP2Q5QJE6 756 aaKnown RBP21.75■■□□□ 1.07
AP3D1-201ENST00000345016 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
AP3D1-201ENST00000345016 KNSTRNQ9Y448 316 aa21.74■■□□□ 1.07
AP3D1-201ENST00000345016 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
AP3D1-201ENST00000345016 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
AP3D1-201ENST00000345016 FTSJ3Q8IY81 847 aaKnown RBP21.69■■□□□ 1.06
AP3D1-201ENST00000345016 TSHZ2Q9NRE2 1034 aa21.69■■□□□ 1.06
AP3D1-201ENST00000345016 CCER2I3L3R5 266 aa21.67■■□□□ 1.06
AP3D1-201ENST00000345016 TPRNQ4KMQ1 711 aa21.67■■□□□ 1.06
AP3D1-201ENST00000345016 FRAT1Q92837 279 aaPredicted RBP21.67■■□□□ 1.06
AP3D1-201ENST00000345016 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
AP3D1-201ENST00000345016 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
AP3D1-201ENST00000345016 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.06
AP3D1-201ENST00000345016 CDCA8Q53HL2 280 aa21.62■■□□□ 1.05
AP3D1-201ENST00000345016 NPM1P06748 294 aaKnown RBP eCLIP21.61■■□□□ 1.05
AP3D1-201ENST00000345016 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.056e-6■□□□□ 9
AP3D1-201ENST00000345016 PLCB2Q00722 1185 aa21.58■■□□□ 1.05
AP3D1-201ENST00000345016 CC2D1BQ5T0F9 858 aaKnown RBP21.57■■□□□ 1.04
AP3D1-201ENST00000345016 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
AP3D1-201ENST00000345016 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
AP3D1-201ENST00000345016 TIMELESSQ9UNS1 1208 aa21.56■■□□□ 1.04
AP3D1-201ENST00000345016 HSP90AB1P08238 724 aaKnown RBP21.55■■□□□ 1.04
AP3D1-201ENST00000345016 CASC1Q6TDU7 716 aa21.55■■□□□ 1.04
AP3D1-201ENST00000345016 CFDP1Q9UEE9 299 aaPredicted RBP21.55■■□□□ 1.04
AP3D1-201ENST00000345016 PLEKHD1A6NEE1 506 aa21.53■■□□□ 1.04
AP3D1-201ENST00000345016 ZRSR1Q15695 479 aaKnown RBP21.53■■□□□ 1.04
AP3D1-201ENST00000345016 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
AP3D1-201ENST00000345016 L1TD1Q5T7N2 865 aaKnown RBP21.5■■□□□ 1.03
AP3D1-201ENST00000345016 SPRYD3Q8NCJ5 442 aa21.49■■□□□ 1.03
AP3D1-201ENST00000345016 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
AP3D1-201ENST00000345016 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
AP3D1-201ENST00000345016 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
AP3D1-201ENST00000345016 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
AP3D1-201ENST00000345016 CDK11BP21127 795 aaKnown RBP21.46■■□□□ 1.03
AP3D1-201ENST00000345016 HSCBQ8IWL3 235 aa21.46■■□□□ 1.03
AP3D1-201ENST00000345016 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.02
AP3D1-201ENST00000345016 NUDCQ9Y266 331 aa21.44■■□□□ 1.02
AP3D1-201ENST00000345016 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
AP3D1-201ENST00000345016 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
AP3D1-201ENST00000345016 MS4A1P11836 297 aa21.41■■□□□ 1.02
AP3D1-201ENST00000345016 MSNP26038 577 aaKnown RBP21.41■■□□□ 1.02
AP3D1-201ENST00000345016 ZBTB7CA1YPR0 619 aa21.41■■□□□ 1.02
AP3D1-201ENST00000345016 C14orf37Q86TY3 774 aa21.39■■□□□ 1.01
AP3D1-201ENST00000345016 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
AP3D1-201ENST00000345016 TCERG1O14776 1098 aaKnown RBP21.39■■□□□ 1.01
AP3D1-201ENST00000345016 SLKQ9H2G2 1235 aaPredicted RBP21.39■■□□□ 1.01
AP3D1-201ENST00000345016 U2SURPO15042 1029 aaKnown RBP21.38■■□□□ 1.01
AP3D1-201ENST00000345016 PPP1R15AO75807 674 aaPredicted RBP21.38■■□□□ 1.01
AP3D1-201ENST00000345016 IPO9Q96P70 1041 aaKnown RBP21.38■■□□□ 1.01
AP3D1-201ENST00000345016 RCAN3Q9UKA8 241 aa21.38■■□□□ 1.01
AP3D1-201ENST00000345016 GZF1Q9H116 711 aaPredicted RBP21.37■■□□□ 1.01
AP3D1-201ENST00000345016 CHMP4BQ9H444 224 aaKnown RBP21.37■■□□□ 1.01
AP3D1-201ENST00000345016 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
AP3D1-201ENST00000345016 TMF1P82094 1093 aa21.35■■□□□ 1.01
AP3D1-201ENST00000345016 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
AP3D1-201ENST00000345016 SOGA1O94964 1423 aa21.34■■□□□ 1.01
AP3D1-201ENST00000345016 KANK4Q5T7N3 995 aaPredicted RBP21.33■■□□□ 1
AP3D1-201ENST00000345016 A0A0G2JS52 829 aa21.3■■□□□ 1
AP3D1-201ENST00000345016 CHAF1AQ13111 956 aaPredicted RBP21.3■■□□□ 1
AP3D1-201ENST00000345016 GOLGA6L4A6NEF3 574 aa21.27■■□□□ 1
AP3D1-201ENST00000345016 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
AP3D1-201ENST00000345016 FGD1P98174 961 aa21.27■■□□□ 1
AP3D1-201ENST00000345016 TAOK2Q9UL54 1235 aa21.27■■□□□ 1
AP3D1-201ENST00000345016 KCNJ4P48050 445 aa21.27■□□□□ 0.99
AP3D1-201ENST00000345016 FOXD1Q16676 465 aa21.26■□□□□ 0.99
AP3D1-201ENST00000345016 NRDCO43847 1150 aa21.25■□□□□ 0.99
AP3D1-201ENST00000345016 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
AP3D1-201ENST00000345016 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
AP3D1-201ENST00000345016 POGKQ9P215 609 aa21.23■□□□□ 0.99
AP3D1-201ENST00000345016 GBP4Q96PP9 640 aa21.23■□□□□ 0.99
AP3D1-201ENST00000345016 ARID3AQ99856 593 aa21.23■□□□□ 0.99
AP3D1-201ENST00000345016 GOLGA6L6A8MZA4 724 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms