RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 TSPY4P0CV99 314 aa21.81■■□□□ 1.08
CDC42BPG-201ENST00000342711 TSPY10P0CW01 314 aa21.81■■□□□ 1.08
CDC42BPG-201ENST00000342711 TRIM44Q96DX7 344 aaPredicted RBP21.81■■□□□ 1.08
CDC42BPG-201ENST00000342711 NPM1P06748 294 aaKnown RBP eCLIP21.79■■□□□ 1.08
CDC42BPG-201ENST00000342711 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
CDC42BPG-201ENST00000342711 NCLP19338 710 aaKnown RBP21.76■■□□□ 1.07
CDC42BPG-201ENST00000342711 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
CDC42BPG-201ENST00000342711 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
CDC42BPG-201ENST00000342711 ANP32EQ9BTT0 268 aa21.72■■□□□ 1.07
CDC42BPG-201ENST00000342711 GOLGA6L22H0YM25 854 aa21.71■■□□□ 1.07
CDC42BPG-201ENST00000342711 CDK11BP21127 795 aaKnown RBP21.71■■□□□ 1.07
CDC42BPG-201ENST00000342711 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
CDC42BPG-201ENST00000342711 SUPT16HQ9Y5B9 1047 aaKnown RBP21.68■■□□□ 1.06
CDC42BPG-201ENST00000342711 CLIP1P30622 1438 aa21.67■■□□□ 1.06
CDC42BPG-201ENST00000342711 ZBTB7CA1YPR0 619 aa21.66■■□□□ 1.06
CDC42BPG-201ENST00000342711 A0A0G2JS52 829 aa21.62■■□□□ 1.05
CDC42BPG-201ENST00000342711 PTMAP06454 111 aaKnown RBP21.62■■□□□ 1.05
CDC42BPG-201ENST00000342711 PLEKHG5O94827 1062 aa21.61■■□□□ 1.05
CDC42BPG-201ENST00000342711 TPRNQ4KMQ1 711 aa21.6■■□□□ 1.05
CDC42BPG-201ENST00000342711 PPM1GO15355 546 aaPredicted RBP21.58■■□□□ 1.05
CDC42BPG-201ENST00000342711 LAS1LQ9Y4W2 734 aaKnown RBP21.58■■□□□ 1.05
CDC42BPG-201ENST00000342711 RGL3Q3MIN7 710 aa21.58■■□□□ 1.04
CDC42BPG-201ENST00000342711 C14orf37Q86TY3 774 aa21.57■■□□□ 1.04
CDC42BPG-201ENST00000342711 DNTTIP2Q5QJE6 756 aaKnown RBP21.56■■□□□ 1.04
CDC42BPG-201ENST00000342711 RTN4Q9NQC3 1192 aaKnown RBP21.55■■□□□ 1.04
CDC42BPG-201ENST00000342711 TNNT2P45379 298 aaPredicted RBP21.54■■□□□ 1.04
CDC42BPG-201ENST00000342711 CFAP53Q96M91 514 aa21.54■■□□□ 1.04
CDC42BPG-201ENST00000342711 FTSJ3Q8IY81 847 aaKnown RBP21.54■■□□□ 1.04
CDC42BPG-201ENST00000342711 CASC1Q6TDU7 716 aa21.53■■□□□ 1.04
CDC42BPG-201ENST00000342711 KNSTRNQ9Y448 316 aa21.52■■□□□ 1.04
CDC42BPG-201ENST00000342711 ZRSR1Q15695 479 aaKnown RBP21.52■■□□□ 1.04
CDC42BPG-201ENST00000342711 ERICH6BQ5W0A0 696 aa21.51■■□□□ 1.03
CDC42BPG-201ENST00000342711 NAP1L5Q96NT1 182 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPG-201ENST00000342711 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
CDC42BPG-201ENST00000342711 PPP1R15AO75807 674 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPG-201ENST00000342711 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPG-201ENST00000342711 RGS3P49796 1198 aa21.49■■□□□ 1.03
CDC42BPG-201ENST00000342711 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
CDC42BPG-201ENST00000342711 NOP58Q9Y2X3 529 aaKnown RBP21.48■■□□□ 1.03
CDC42BPG-201ENST00000342711 RSF1Q96T23 1441 aaPredicted RBP21.48■■□□□ 1.03
CDC42BPG-201ENST00000342711 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
CDC42BPG-201ENST00000342711 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
CDC42BPG-201ENST00000342711 CARD11Q9BXL7 1154 aa21.46■■□□□ 1.03
CDC42BPG-201ENST00000342711 KCNH8Q96L42 1107 aa21.45■■□□□ 1.02
CDC42BPG-201ENST00000342711 CDCA8Q53HL2 280 aa21.44■■□□□ 1.02
CDC42BPG-201ENST00000342711 GOLGA3Q08378 1498 aa21.42■■□□□ 1.02
CDC42BPG-201ENST00000342711 FRAT1Q92837 279 aaPredicted RBP21.41■■□□□ 1.02
CDC42BPG-201ENST00000342711 PLCB2Q00722 1185 aa21.4■■□□□ 1.02
CDC42BPG-201ENST00000342711 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
CDC42BPG-201ENST00000342711 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
CDC42BPG-201ENST00000342711 B4GALNT3Q6L9W6 998 aa21.38■■□□□ 1.01
CDC42BPG-201ENST00000342711 SIN3AQ96ST3 1273 aa21.38■■□□□ 1.01
CDC42BPG-201ENST00000342711 HSP90AB1P08238 724 aaKnown RBP21.36■■□□□ 1.01
CDC42BPG-201ENST00000342711 CC2D1BQ5T0F9 858 aaKnown RBP21.34■■□□□ 1.01
CDC42BPG-201ENST00000342711 TAOK2Q9UL54 1235 aa21.32■■□□□ 1
CDC42BPG-201ENST00000342711 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
CDC42BPG-201ENST00000342711 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
CDC42BPG-201ENST00000342711 NUDCQ9Y266 331 aa21.31■■□□□ 1
CDC42BPG-201ENST00000342711 TULP1O00294 542 aaPredicted RBP21.31■■□□□ 1
CDC42BPG-201ENST00000342711 EEA1Q15075 1411 aa21.29■■□□□ 1
CDC42BPG-201ENST00000342711 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
CDC42BPG-201ENST00000342711 HAP1P54257 671 aaPredicted RBP21.25■□□□□ 0.99
CDC42BPG-201ENST00000342711 GOLGA6L6A8MZA4 724 aa21.24■□□□□ 0.99
CDC42BPG-201ENST00000342711 OS9Q13438 667 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPG-201ENST00000342711 CHMP4BQ9H444 224 aaKnown RBP21.23■□□□□ 0.99
CDC42BPG-201ENST00000342711 U2SURPO15042 1029 aaKnown RBP21.23■□□□□ 0.99
CDC42BPG-201ENST00000342711 MS4A1P11836 297 aa21.22■□□□□ 0.99
CDC42BPG-201ENST00000342711 DEKP35659 375 aaKnown RBP21.22■□□□□ 0.99
CDC42BPG-201ENST00000342711 FGD1P98174 961 aa21.22■□□□□ 0.99
CDC42BPG-201ENST00000342711 HSCBQ8IWL3 235 aa21.22■□□□□ 0.99
CDC42BPG-201ENST00000342711 SPRYD3Q8NCJ5 442 aa21.2■□□□□ 0.98
CDC42BPG-201ENST00000342711 POGKQ9P215 609 aa21.2■□□□□ 0.98
CDC42BPG-201ENST00000342711 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
CDC42BPG-201ENST00000342711 KCNJ4P48050 445 aa21.19■□□□□ 0.98
CDC42BPG-201ENST00000342711 NAP1L2Q9ULW6 460 aaPredicted RBP21.19■□□□□ 0.98
CDC42BPG-201ENST00000342711 RBM19Q9Y4C8 960 aaKnown RBP21.16■□□□□ 0.98
CDC42BPG-201ENST00000342711 L1TD1Q5T7N2 865 aaKnown RBP21.15■□□□□ 0.98
CDC42BPG-201ENST00000342711 ARID4BQ4LE39 1312 aaPredicted RBP21.15■□□□□ 0.98
CDC42BPG-201ENST00000342711 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
CDC42BPG-201ENST00000342711 MSNP26038 577 aaKnown RBP21.14■□□□□ 0.97
CDC42BPG-201ENST00000342711 GOLGA6L4A6NEF3 574 aa21.14■□□□□ 0.97
CDC42BPG-201ENST00000342711 NRDCO43847 1150 aa21.13■□□□□ 0.97
CDC42BPG-201ENST00000342711 LMOD2Q6P5Q4 547 aa21.13■□□□□ 0.97
CDC42BPG-201ENST00000342711 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
CDC42BPG-201ENST00000342711 CHAF1AQ13111 956 aaPredicted RBP21.12■□□□□ 0.97
CDC42BPG-201ENST00000342711 TMF1P82094 1093 aa21.12■□□□□ 0.97
CDC42BPG-201ENST00000342711 PNNQ9H307 717 aaKnown RBP21.11■□□□□ 0.97
CDC42BPG-201ENST00000342711 DCAF11Q8TEB1 546 aa21.1■□□□□ 0.97
CDC42BPG-201ENST00000342711 KIF27Q86VH2 1401 aa21.09■□□□□ 0.97
CDC42BPG-201ENST00000342711 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
CDC42BPG-201ENST00000342711 DRC7Q8IY82 874 aa21.06■□□□□ 0.96
CDC42BPG-201ENST00000342711 MCCP23508 829 aa21.05■□□□□ 0.96
CDC42BPG-201ENST00000342711 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
CDC42BPG-201ENST00000342711 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
CDC42BPG-201ENST00000342711 NPHP1O15259 732 aa21.03■□□□□ 0.96
CDC42BPG-201ENST00000342711 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
CDC42BPG-201ENST00000342711 MORC1Q86VD1 984 aa21.01■□□□□ 0.95
CDC42BPG-201ENST00000342711 GOLGA2Q08379 1002 aa21■□□□□ 0.95
CDC42BPG-201ENST00000342711 SOX12O15370 315 aa20.98■□□□□ 0.95
CDC42BPG-201ENST00000342711 APBB1O00213 710 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms