RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
CAST-204ENST00000341926 ZNF316A6NFI3 1004 aaPredicted RBP11.5□□□□□ -0.57
CAST-204ENST00000341926 MIER1Q8N108 512 aa11.46□□□□□ -0.57
CAST-204ENST00000341926 ZBTB22O15209 634 aa11.44□□□□□ -0.58
CAST-204ENST00000341926 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
CAST-204ENST00000341926 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
CAST-204ENST00000341926 PIAS4Q8N2W9 510 aaPredicted RBP11.43□□□□□ -0.58
CAST-204ENST00000341926 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
CAST-204ENST00000341926 DHX37Q8IY37 1157 aaKnown RBP11.42□□□□□ -0.58
CAST-204ENST00000341926 NAP1L5Q96NT1 182 aaPredicted RBP11.42□□□□□ -0.58
CAST-204ENST00000341926 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
CAST-204ENST00000341926 NPM3O75607 178 aaKnown RBP11.41□□□□□ -0.58
CAST-204ENST00000341926 NAP1L2Q9ULW6 460 aaPredicted RBP11.37□□□□□ -0.59
CAST-204ENST00000341926 RRP9O43818 475 aaKnown RBP11.36□□□□□ -0.59
CAST-204ENST00000341926 CNKSR2Q8WXI2 1034 aa11.35□□□□□ -0.59
CAST-204ENST00000341926 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
CAST-204ENST00000341926 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
CAST-204ENST00000341926 WASHC2CQ9Y4E1 1318 aa11.35□□□□□ -0.59
CAST-204ENST00000341926 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
CAST-204ENST00000341926 C14orf37Q86TY3 774 aa11.34□□□□□ -0.59
CAST-204ENST00000341926 CDK11AQ9UQ88 783 aaPredicted RBP11.34□□□□□ -0.59
CAST-204ENST00000341926 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.6
CAST-204ENST00000341926 BCCIPQ9P287 314 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAST-204ENST00000341926 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
CAST-204ENST00000341926 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
CAST-204ENST00000341926 HAP1P54257 671 aaPredicted RBP11.3□□□□□ -0.6
CAST-204ENST00000341926 NOP58Q9Y2X3 529 aaKnown RBP11.3□□□□□ -0.6
CAST-204ENST00000341926 TAOK2Q9UL54 1235 aa11.28□□□□□ -0.6
CAST-204ENST00000341926 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.61
CAST-204ENST00000341926 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.61
CAST-204ENST00000341926 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
CAST-204ENST00000341926 NBR1Q14596 966 aa11.26□□□□□ -0.61
CAST-204ENST00000341926 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
CAST-204ENST00000341926 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
CAST-204ENST00000341926 BBXQ8WY36 941 aaPredicted RBP11.24□□□□□ -0.61
CAST-204ENST00000341926 PRDM4Q9UKN5 801 aa11.24□□□□□ -0.61
CAST-204ENST00000341926 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
CAST-204ENST00000341926 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
CAST-204ENST00000341926 FKBP8Q14318 412 aa11.23□□□□□ -0.61
CAST-204ENST00000341926 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
CAST-204ENST00000341926 GTF2E1P29083 439 aaPredicted RBP11.22□□□□□ -0.61
CAST-204ENST00000341926 TEX2Q8IWB9 1127 aa11.22□□□□□ -0.61
CAST-204ENST00000341926 CENPJQ9HC77 1338 aaPredicted RBP11.22□□□□□ -0.61
CAST-204ENST00000341926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.21□□□□□ -0.61
CAST-204ENST00000341926 BCANQ96GW7 911 aa11.21□□□□□ -0.61
CAST-204ENST00000341926 CHMP4BQ9H444 224 aaKnown RBP11.21□□□□□ -0.61
CAST-204ENST00000341926 CDK11BP21127 795 aaKnown RBP11.19□□□□□ -0.62
CAST-204ENST00000341926 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
CAST-204ENST00000341926 CANXP27824 592 aaKnown RBP11.17□□□□□ -0.62
CAST-204ENST00000341926 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
CAST-204ENST00000341926 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
CAST-204ENST00000341926 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.62
CAST-204ENST00000341926 CNGB1Q14028 1251 aaPredicted RBP11.14□□□□□ -0.63
CAST-204ENST00000341926 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
CAST-204ENST00000341926 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
CAST-204ENST00000341926 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
CAST-204ENST00000341926 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
CAST-204ENST00000341926 ARID4BQ4LE39 1312 aaPredicted RBP11.1□□□□□ -0.63
CAST-204ENST00000341926 PPM1GO15355 546 aaPredicted RBP11.1□□□□□ -0.63
CAST-204ENST00000341926 SECISBP2LQ93073 1101 aaKnown RBP11.09□□□□□ -0.63
CAST-204ENST00000341926 NEFMP07197 916 aa11.09□□□□□ -0.63
CAST-204ENST00000341926 SUPT5HO00267 1087 aaKnown RBP11.08□□□□□ -0.64
CAST-204ENST00000341926 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
CAST-204ENST00000341926 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
CAST-204ENST00000341926 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
CAST-204ENST00000341926 ITGAEP38570 1179 aa11.06□□□□□ -0.64
CAST-204ENST00000341926 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
CAST-204ENST00000341926 RGS3P49796 1198 aa11.05□□□□□ -0.64
CAST-204ENST00000341926 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
CAST-204ENST00000341926 IPO9Q96P70 1041 aaKnown RBP11.03□□□□□ -0.64
CAST-204ENST00000341926 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.64
CAST-204ENST00000341926 GSE1Q14687 1217 aa11.01□□□□□ -0.65
CAST-204ENST00000341926 IRX6P78412 446 aaPredicted RBP11□□□□□ -0.65
CAST-204ENST00000341926 HMGXB3Q12766 1538 aa11□□□□□ -0.65
CAST-204ENST00000341926 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
CAST-204ENST00000341926 CNPY4Q8N129 248 aa10.96□□□□□ -0.65
CAST-204ENST00000341926 ANP32AP39687 249 aaKnown RBP10.96□□□□□ -0.66
CAST-204ENST00000341926 FOXD4L1Q9NU39 408 aa10.96□□□□□ -0.66
CAST-204ENST00000341926 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
CAST-204ENST00000341926 NESP48681 1621 aa10.93□□□□□ -0.66
CAST-204ENST00000341926 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
CAST-204ENST00000341926 TICAM2Q86XR7 235 aa10.93□□□□□ -0.66
CAST-204ENST00000341926 TMEM51Q9NW97 253 aa10.93□□□□□ -0.66
CAST-204ENST00000341926 SMARCA2P51531 1590 aa10.92□□□□□ -0.66
CAST-204ENST00000341926 ZNF830Q96NB3 372 aaPredicted RBP10.92□□□□□ -0.66
CAST-204ENST00000341926 HMGB1P09429 215 aaKnown RBP10.92□□□□□ -0.66
CAST-204ENST00000341926 ARID3AQ99856 593 aa10.92□□□□□ -0.66
CAST-204ENST00000341926 RGS22Q8NE09 1264 aa10.91□□□□□ -0.66
CAST-204ENST00000341926 CCDC9Q9Y3X0 531 aaKnown RBP10.91□□□□□ -0.66
CAST-204ENST00000341926 ATAD2BQ9ULI0 1458 aa10.91□□□□□ -0.66
CAST-204ENST00000341926 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
CAST-204ENST00000341926 UTP14CQ5TAP6 766 aaKnown RBP10.9□□□□□ -0.66
CAST-204ENST00000341926 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.67
CAST-204ENST00000341926 MAPK8IP2Q13387 824 aaPredicted RBP10.89□□□□□ -0.67
CAST-204ENST00000341926 PNNQ9H307 717 aaKnown RBP10.89□□□□□ -0.67
CAST-204ENST00000341926 KCNG1Q9UIX4 513 aa10.89□□□□□ -0.67
CAST-204ENST00000341926 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
CAST-204ENST00000341926 MMP14P50281 582 aa10.88□□□□□ -0.67
CAST-204ENST00000341926 POLR3GLQ9BT43 218 aa10.87□□□□□ -0.67
CAST-204ENST00000341926 RRAGDQ9NQL2 400 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms