RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
RTL6-201ENST00000341255 EIF4G2P78344 907 aaKnown RBP eCLIP21.59■■□□□ 1.05
RTL6-201ENST00000341255 EEA1Q15075 1411 aa21.58■■□□□ 1.05
RTL6-201ENST00000341255 ANP32EQ9BTT0 268 aa21.56■■□□□ 1.04
RTL6-201ENST00000341255 RRP7BPQ9NSQ0 103 aa21.54■■□□□ 1.04
RTL6-201ENST00000341255 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
RTL6-201ENST00000341255 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
RTL6-201ENST00000341255 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
RTL6-201ENST00000341255 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
RTL6-201ENST00000341255 DDRGK1Q96HY6 314 aa21.45■■□□□ 1.03
RTL6-201ENST00000341255 RB1CC1Q8TDY2 1594 aa21.45■■□□□ 1.02
RTL6-201ENST00000341255 SUPT16HQ9Y5B9 1047 aaKnown RBP21.45■■□□□ 1.02
RTL6-201ENST00000341255 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
RTL6-201ENST00000341255 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
RTL6-201ENST00000341255 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.02
RTL6-201ENST00000341255 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.02
RTL6-201ENST00000341255 BECN1Q14457 450 aa21.39■■□□□ 1.01
RTL6-201ENST00000341255 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
RTL6-201ENST00000341255 RGL3Q3MIN7 710 aa21.34■■□□□ 1.01
RTL6-201ENST00000341255 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
RTL6-201ENST00000341255 CFDP1Q9UEE9 299 aaPredicted RBP21.34■■□□□ 1.01
RTL6-201ENST00000341255 TNIKQ9UKE5 1360 aa21.33■■□□□ 1.01
RTL6-201ENST00000341255 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
RTL6-201ENST00000341255 CDCA8Q53HL2 280 aa21.31■■□□□ 1
RTL6-201ENST00000341255 TRIM44Q96DX7 344 aaPredicted RBP21.31■■□□□ 1
RTL6-201ENST00000341255 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
RTL6-201ENST00000341255 PPP4R2Q9NY27 417 aa21.27■■□□□ 1
RTL6-201ENST00000341255 CFAP53Q96M91 514 aa21.26■□□□□ 0.99
RTL6-201ENST00000341255 PPM1GO15355 546 aaPredicted RBP21.25■□□□□ 0.99
RTL6-201ENST00000341255 KNSTRNQ9Y448 316 aa21.25■□□□□ 0.99
RTL6-201ENST00000341255 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
RTL6-201ENST00000341255 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
RTL6-201ENST00000341255 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
RTL6-201ENST00000341255 NACADO15069 1562 aa21.23■□□□□ 0.99
RTL6-201ENST00000341255 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
RTL6-201ENST00000341255 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
RTL6-201ENST00000341255 GOLGA6L22H0YM25 854 aa21.21■□□□□ 0.99
RTL6-201ENST00000341255 SIN3AQ96ST3 1273 aa21.21■□□□□ 0.99
RTL6-201ENST00000341255 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
RTL6-201ENST00000341255 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
RTL6-201ENST00000341255 NCLP19338 710 aaKnown RBP21.17■□□□□ 0.98
RTL6-201ENST00000341255 A0A0G2JS52 829 aa21.15■□□□□ 0.98
RTL6-201ENST00000341255 B4GALNT3Q6L9W6 998 aa21.14■□□□□ 0.98
RTL6-201ENST00000341255 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
RTL6-201ENST00000341255 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
RTL6-201ENST00000341255 RGS3P49796 1198 aa21.11■□□□□ 0.97
RTL6-201ENST00000341255 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
RTL6-201ENST00000341255 PTMAP06454 111 aaKnown RBP21.07■□□□□ 0.96
RTL6-201ENST00000341255 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
RTL6-201ENST00000341255 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
RTL6-201ENST00000341255 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
RTL6-201ENST00000341255 NUDCQ9Y266 331 aa21.06■□□□□ 0.96
RTL6-201ENST00000341255 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
RTL6-201ENST00000341255 NAP1L5Q96NT1 182 aaPredicted RBP21.05■□□□□ 0.96
RTL6-201ENST00000341255 NEUROD2Q15784 382 aa21.05■□□□□ 0.96
RTL6-201ENST00000341255 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
RTL6-201ENST00000341255 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
RTL6-201ENST00000341255 POGKQ9P215 609 aa21.02■□□□□ 0.96
RTL6-201ENST00000341255 DNTTIP2Q5QJE6 756 aaKnown RBP21.01■□□□□ 0.95
RTL6-201ENST00000341255 TPRNQ4KMQ1 711 aa20.99■□□□□ 0.95
RTL6-201ENST00000341255 FRAT1Q92837 279 aaPredicted RBP20.99■□□□□ 0.95
RTL6-201ENST00000341255 DEKP35659 375 aaKnown RBP20.99■□□□□ 0.95
RTL6-201ENST00000341255 CASC1Q6TDU7 716 aa20.99■□□□□ 0.95
RTL6-201ENST00000341255 TIMELESSQ9UNS1 1208 aa20.99■□□□□ 0.95
RTL6-201ENST00000341255 HAP1P54257 671 aaPredicted RBP20.98■□□□□ 0.95
RTL6-201ENST00000341255 CARMIL1Q5VZK9 1371 aa20.98■□□□□ 0.95
RTL6-201ENST00000341255 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
RTL6-201ENST00000341255 CC2D1BQ5T0F9 858 aaKnown RBP20.96■□□□□ 0.95
RTL6-201ENST00000341255 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
RTL6-201ENST00000341255 CCER2I3L3R5 266 aa20.96■□□□□ 0.95
RTL6-201ENST00000341255 CDK11BP21127 795 aaKnown RBP20.94■□□□□ 0.94
RTL6-201ENST00000341255 TMF1P82094 1093 aa20.93■□□□□ 0.94
RTL6-201ENST00000341255 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
RTL6-201ENST00000341255 CUX2O14529 1486 aa20.93■□□□□ 0.94
RTL6-201ENST00000341255 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
RTL6-201ENST00000341255 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
RTL6-201ENST00000341255 MS4A1P11836 297 aa20.91■□□□□ 0.94
RTL6-201ENST00000341255 SOGA1O94964 1423 aa20.89■□□□□ 0.94
RTL6-201ENST00000341255 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.94
RTL6-201ENST00000341255 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
RTL6-201ENST00000341255 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
RTL6-201ENST00000341255 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
RTL6-201ENST00000341255 KANK1Q14678 1352 aa20.87■□□□□ 0.93
RTL6-201ENST00000341255 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
RTL6-201ENST00000341255 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
RTL6-201ENST00000341255 PLCB2Q00722 1185 aa20.85■□□□□ 0.93
RTL6-201ENST00000341255 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.92
RTL6-201ENST00000341255 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
RTL6-201ENST00000341255 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
RTL6-201ENST00000341255 TSHZ2Q9NRE2 1034 aa20.8■□□□□ 0.92
RTL6-201ENST00000341255 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
RTL6-201ENST00000341255 ARHGAP35Q9NRY4 1499 aa20.79■□□□□ 0.92
RTL6-201ENST00000341255 L1TD1Q5T7N2 865 aaKnown RBP20.78■□□□□ 0.92
RTL6-201ENST00000341255 SPRYD3Q8NCJ5 442 aa20.78■□□□□ 0.92
RTL6-201ENST00000341255 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
RTL6-201ENST00000341255 SRPK2P78362 688 aaKnown RBP20.76■□□□□ 0.91
RTL6-201ENST00000341255 OS9Q13438 667 aaPredicted RBP20.75■□□□□ 0.91
RTL6-201ENST00000341255 PKD2Q13563 968 aa20.75■□□□□ 0.91
RTL6-201ENST00000341255 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
RTL6-201ENST00000341255 KANK4Q5T7N3 995 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms