RNA–Protein interactions for RNA: ENST00000340892.9

TC2N-201, Transcript of tandem C2 domains, nuclear, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TC2N, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TC2N-201ENST00000340892 KCNH8Q96L42 1107 aa20.84■□□□□ 0.93
TC2N-201ENST00000340892 EIF4G2P78344 907 aaKnown RBP eCLIP20.8■□□□□ 0.92
TC2N-201ENST00000340892 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
TC2N-201ENST00000340892 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
TC2N-201ENST00000340892 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
TC2N-201ENST00000340892 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
TC2N-201ENST00000340892 CLIP1P30622 1438 aa20.7■□□□□ 0.9
TC2N-201ENST00000340892 NEUROD2Q15784 382 aa20.67■□□□□ 0.9
TC2N-201ENST00000340892 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
TC2N-201ENST00000340892 SUPT16HQ9Y5B9 1047 aaKnown RBP20.65■□□□□ 0.9
TC2N-201ENST00000340892 PPP1R15AO75807 674 aaPredicted RBP20.63■□□□□ 0.89
TC2N-201ENST00000340892 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
TC2N-201ENST00000340892 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
TC2N-201ENST00000340892 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
TC2N-201ENST00000340892 TPRNQ4KMQ1 711 aa20.58■□□□□ 0.89
TC2N-201ENST00000340892 TNNT2P45379 298 aaPredicted RBP20.54■□□□□ 0.88
TC2N-201ENST00000340892 CFDP1Q9UEE9 299 aaPredicted RBP20.52■□□□□ 0.88
TC2N-201ENST00000340892 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
TC2N-201ENST00000340892 KNSTRNQ9Y448 316 aa20.51■□□□□ 0.87
TC2N-201ENST00000340892 MYO15BQ96JP2 1530 aa20.5■□□□□ 0.87
TC2N-201ENST00000340892 RGS3P49796 1198 aa20.49■□□□□ 0.87
TC2N-201ENST00000340892 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
TC2N-201ENST00000340892 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
TC2N-201ENST00000340892 NCLP19338 710 aaKnown RBP20.48■□□□□ 0.87
TC2N-201ENST00000340892 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
TC2N-201ENST00000340892 LMOD2Q6P5Q4 547 aa20.45■□□□□ 0.86
TC2N-201ENST00000340892 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
TC2N-201ENST00000340892 ARID4BQ4LE39 1312 aaPredicted RBP20.45■□□□□ 0.86
TC2N-201ENST00000340892 BECN1Q14457 450 aa20.43■□□□□ 0.86
TC2N-201ENST00000340892 TAOK2Q9UL54 1235 aa20.42■□□□□ 0.86
TC2N-201ENST00000340892 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
TC2N-201ENST00000340892 FTSJ3Q8IY81 847 aaKnown RBP20.41■□□□□ 0.86
TC2N-201ENST00000340892 GLIPR1L2Q4G1C9 344 aa20.4■□□□□ 0.86
TC2N-201ENST00000340892 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
TC2N-201ENST00000340892 B4GALNT3Q6L9W6 998 aa20.4■□□□□ 0.86
TC2N-201ENST00000340892 HAP1P54257 671 aaPredicted RBP20.39■□□□□ 0.86
TC2N-201ENST00000340892 TRIM44Q96DX7 344 aaPredicted RBP20.39■□□□□ 0.85
TC2N-201ENST00000340892 RTN4Q9NQC3 1192 aaKnown RBP20.36■□□□□ 0.85
TC2N-201ENST00000340892 U2SURPO15042 1029 aaKnown RBP20.34■□□□□ 0.85
TC2N-201ENST00000340892 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
TC2N-201ENST00000340892 SOX12O15370 315 aa20.34■□□□□ 0.85
TC2N-201ENST00000340892 POGKQ9P215 609 aa20.33■□□□□ 0.84
TC2N-201ENST00000340892 GOLGA6L22H0YM25 854 aa20.32■□□□□ 0.84
TC2N-201ENST00000340892 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
TC2N-201ENST00000340892 CDCA8Q53HL2 280 aa20.31■□□□□ 0.84
TC2N-201ENST00000340892 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
TC2N-201ENST00000340892 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
TC2N-201ENST00000340892 CDK11BP21127 795 aaKnown RBP20.3■□□□□ 0.84
TC2N-201ENST00000340892 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
TC2N-201ENST00000340892 PTMAP06454 111 aaKnown RBP20.28■□□□□ 0.84
TC2N-201ENST00000340892 SAFB2Q14151 953 aaKnown RBP eCLIP20.28■□□□□ 0.84
TC2N-201ENST00000340892 DCAF11Q8TEB1 546 aa20.28■□□□□ 0.84
TC2N-201ENST00000340892 PLCB2Q00722 1185 aa20.27■□□□□ 0.84
TC2N-201ENST00000340892 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
TC2N-201ENST00000340892 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
TC2N-201ENST00000340892 ANP32EQ9BTT0 268 aa20.25■□□□□ 0.83
TC2N-201ENST00000340892 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
TC2N-201ENST00000340892 MLECQ14165 292 aa20.22■□□□□ 0.83
TC2N-201ENST00000340892 DNTTIP2Q5QJE6 756 aaKnown RBP20.22■□□□□ 0.83
TC2N-201ENST00000340892 ZRSR1Q15695 479 aaKnown RBP20.21■□□□□ 0.83
TC2N-201ENST00000340892 FOXD1Q16676 465 aa20.2■□□□□ 0.82
TC2N-201ENST00000340892 TNIKQ9UKE5 1360 aa20.16■□□□□ 0.82
TC2N-201ENST00000340892 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
TC2N-201ENST00000340892 SPRYD3Q8NCJ5 442 aa20.15■□□□□ 0.82
TC2N-201ENST00000340892 OS9Q13438 667 aaPredicted RBP20.15■□□□□ 0.82
TC2N-201ENST00000340892 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
TC2N-201ENST00000340892 EEA1Q15075 1411 aa20.15■□□□□ 0.82
TC2N-201ENST00000340892 FGD1P98174 961 aa20.14■□□□□ 0.81
TC2N-201ENST00000340892 NAP1L2Q9ULW6 460 aaPredicted RBP20.13■□□□□ 0.81
TC2N-201ENST00000340892 NOP58Q9Y2X3 529 aaKnown RBP20.12■□□□□ 0.81
TC2N-201ENST00000340892 KCNJ4P48050 445 aa20.12■□□□□ 0.81
TC2N-201ENST00000340892 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
TC2N-201ENST00000340892 APBB1O00213 710 aa20.11■□□□□ 0.81
TC2N-201ENST00000340892 NPHP1O15259 732 aa20.1■□□□□ 0.81
TC2N-201ENST00000340892 HSP90AB1P08238 724 aaKnown RBP20.09■□□□□ 0.81
TC2N-201ENST00000340892 STK26Q9P289 416 aa20.09■□□□□ 0.81
TC2N-201ENST00000340892 TMF1P82094 1093 aa20.09■□□□□ 0.81
TC2N-201ENST00000340892 GGT6Q6P531 493 aa20.09■□□□□ 0.81
TC2N-201ENST00000340892 NAP1L5Q96NT1 182 aaPredicted RBP20.08■□□□□ 0.81
TC2N-201ENST00000340892 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.81
TC2N-201ENST00000340892 ERICH6BQ5W0A0 696 aa20.08■□□□□ 0.8
TC2N-201ENST00000340892 HSPA5P11021 654 aaKnown RBP20.06■□□□□ 0.8
TC2N-201ENST00000340892 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
TC2N-201ENST00000340892 MORC1Q86VD1 984 aa20.04■□□□□ 0.8
TC2N-201ENST00000340892 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
TC2N-201ENST00000340892 PKD2Q13563 968 aa20.03■□□□□ 0.8
TC2N-201ENST00000340892 SOGA1O94964 1423 aa20■□□□□ 0.79
TC2N-201ENST00000340892 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
TC2N-201ENST00000340892 RBM19Q9Y4C8 960 aaKnown RBP20■□□□□ 0.79
TC2N-201ENST00000340892 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
TC2N-201ENST00000340892 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
TC2N-201ENST00000340892 U2AF1L5P0DN76 240 aaPredicted RBP19.95■□□□□ 0.78
TC2N-201ENST00000340892 U2AF1Q01081 240 aaKnown RBP eCLIP19.95■□□□□ 0.78
TC2N-201ENST00000340892 MS4A1P11836 297 aa19.95■□□□□ 0.78
TC2N-201ENST00000340892 GOLGA6L4A6NEF3 574 aa19.94■□□□□ 0.78
TC2N-201ENST00000340892 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
TC2N-201ENST00000340892 HSCBQ8IWL3 235 aa19.93■□□□□ 0.78
TC2N-201ENST00000340892 SLKQ9H2G2 1235 aaPredicted RBP19.93■□□□□ 0.78
TC2N-201ENST00000340892 CHMP4BQ9H444 224 aaKnown RBP19.92■□□□□ 0.78
TC2N-201ENST00000340892 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms