RNA–Protein interactions for RNA: ENST00000340433.3

RTL4-201, Transcript of retrotransposon Gag like 4, humanhuman

APPRIS P1 BASIC

Gene RTL4, Length 2,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4-201ENST00000340433 PABPN1Q86U42 306 aaKnown RBP eCLIP5.04□□□□□ -1.6
RTL4-201ENST00000340433 CLEC11AQ9Y240 323 aa5.04□□□□□ -1.6
RTL4-201ENST00000340433 MAMSTRQ6ZN01 415 aa5.03□□□□□ -1.6
RTL4-201ENST00000340433 CD44P16070 742 aaKnown RBP5.02□□□□□ -1.61
RTL4-201ENST00000340433 ZCCHC6Q5VYS8 1495 aaKnown RBP5.01□□□□□ -1.61
RTL4-201ENST00000340433 FBXO3Q9UK99 471 aa5.01□□□□□ -1.61
RTL4-201ENST00000340433 SSUH2Q9Y2M2 353 aa5.01□□□□□ -1.61
RTL4-201ENST00000340433 ZNF579Q8NAF0 562 aaKnown RBP4.97□□□□□ -1.61
RTL4-201ENST00000340433 RTN4Q9NQC3 1192 aaKnown RBP4.96□□□□□ -1.62
RTL4-201ENST00000340433 VASPP50552 380 aaPredicted RBP4.95□□□□□ -1.62
RTL4-201ENST00000340433 PRR29P0C7W0 189 aa4.94□□□□□ -1.62
RTL4-201ENST00000340433 AMER1Q5JTC6 1135 aaPredicted RBP4.94□□□□□ -1.62
RTL4-201ENST00000340433 NCAPD3P42695 1498 aa4.94□□□□□ -1.62
RTL4-201ENST00000340433 SCRIBQ14160 1630 aa4.94□□□□□ -1.62
RTL4-201ENST00000340433 CHADLQ6NUI6 762 aa4.93□□□□□ -1.62
RTL4-201ENST00000340433 THOC2Q8NI27 1593 aaKnown RBP4.92□□□□□ -1.62
RTL4-201ENST00000340433 POTEB2H3BUK9 544 aa4.92□□□□□ -1.62
RTL4-201ENST00000340433 HMGXB3Q12766 1538 aa4.91□□□□□ -1.62
RTL4-201ENST00000340433 IFNLR1Q8IU57 520 aaPredicted RBP4.91□□□□□ -1.62
RTL4-201ENST00000340433 FAM163AQ96GL9 167 aaPredicted RBP4.91□□□□□ -1.62
RTL4-201ENST00000340433 FARP1Q9Y4F1 1045 aaPredicted RBP4.91□□□□□ -1.62
RTL4-201ENST00000340433 STAG3Q9UJ98 1225 aa4.91□□□□□ -1.62
RTL4-201ENST00000340433 SCUBE2Q9NQ36 999 aa4.9□□□□□ -1.62
RTL4-201ENST00000340433 CDAN1Q8IWY9 1227 aa4.9□□□□□ -1.63
RTL4-201ENST00000340433 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
RTL4-201ENST00000340433 PLCD3Q8N3E9 789 aa4.88□□□□□ -1.63
RTL4-201ENST00000340433 SLC39A7Q92504 469 aa4.88□□□□□ -1.63
RTL4-201ENST00000340433 C7P10643 843 aa4.87□□□□□ -1.63
RTL4-201ENST00000340433 MIER1Q8N108 512 aa4.87□□□□□ -1.63
RTL4-201ENST00000340433 PEG3Q9GZU2 1588 aa4.87□□□□□ -1.63
RTL4-201ENST00000340433 LAMC3Q9Y6N6 1575 aa4.87□□□□□ -1.63
RTL4-201ENST00000340433 ZRANB1Q9UGI0 708 aa4.87□□□□□ -1.63
RTL4-201ENST00000340433 KLHL34Q8N239 644 aa4.86□□□□□ -1.63
RTL4-201ENST00000340433 SMARCA2P51531 1590 aa4.85□□□□□ -1.63
RTL4-201ENST00000340433 MMRN1Q13201 1228 aa4.84□□□□□ -1.63
RTL4-201ENST00000340433 ERCC6Q03468 1493 aa4.84□□□□□ -1.64
RTL4-201ENST00000340433 GALR2O43603 387 aaPredicted RBP4.82□□□□□ -1.64
RTL4-201ENST00000340433 PAK3O75914 559 aaPredicted RBP4.82□□□□□ -1.64
RTL4-201ENST00000340433 METRNQ9UJH8 293 aa4.82□□□□□ -1.64
RTL4-201ENST00000340433 PLEKHG5O94827 1062 aa4.82□□□□□ -1.64
RTL4-201ENST00000340433 SPOCK2Q92563 424 aa4.82□□□□□ -1.64
RTL4-201ENST00000340433 ATAD2BQ9ULI0 1458 aa4.82□□□□□ -1.64
RTL4-201ENST00000340433 WDR62O43379 1518 aa4.81□□□□□ -1.64
RTL4-201ENST00000340433 SPNS2Q8IVW8 549 aa4.79□□□□□ -1.64
RTL4-201ENST00000340433 CREBZFQ9NS37 354 aa4.79□□□□□ -1.64
RTL4-201ENST00000340433 ZBTB47Q9UFB7 747 aaPredicted RBP4.78□□□□□ -1.64
RTL4-201ENST00000340433 KIF21AQ7Z4S6 1674 aa4.78□□□□□ -1.64
RTL4-201ENST00000340433 PKD2Q13563 968 aa4.78□□□□□ -1.64
RTL4-201ENST00000340433 ASTLQ6HA08 431 aaPredicted RBP4.78□□□□□ -1.64
RTL4-201ENST00000340433 SMARCA4P51532 1647 aa4.78□□□□□ -1.64
RTL4-201ENST00000340433 BAZ1AQ9NRL2 1556 aaPredicted RBP4.78□□□□□ -1.64
RTL4-201ENST00000340433 PELP1Q8IZL8 1130 aaKnown RBP4.76□□□□□ -1.65
RTL4-201ENST00000340433 PDS5BQ9NTI5 1447 aa4.76□□□□□ -1.65
RTL4-201ENST00000340433 POTEJP0CG39 1038 aa4.76□□□□□ -1.65
RTL4-201ENST00000340433 MNX1P50219 401 aaPredicted RBP4.75□□□□□ -1.65
RTL4-201ENST00000340433 MRC2Q9UBG0 1479 aa4.75□□□□□ -1.65
RTL4-201ENST00000340433 CIZ1Q9ULV3 898 aaPredicted RBP4.75□□□□□ -1.65
RTL4-201ENST00000340433 NESP48681 1621 aa4.74□□□□□ -1.65
RTL4-201ENST00000340433 ATMINO43313 823 aaPredicted RBP4.74□□□□□ -1.65
RTL4-201ENST00000340433 ECM2O94769 699 aaPredicted RBP4.74□□□□□ -1.65
RTL4-201ENST00000340433 NUBP1P53384 320 aa4.73□□□□□ -1.65
RTL4-201ENST00000340433 RIMBP3CA6NJZ7 1639 aa4.73□□□□□ -1.65
RTL4-201ENST00000340433 RIMBP3BA6NNM3 1639 aa4.73□□□□□ -1.65
RTL4-201ENST00000340433 RIMBP3Q9UFD9 1639 aa4.73□□□□□ -1.65
RTL4-201ENST00000340433 PRKCSHP14314 528 aaPredicted RBP4.72□□□□□ -1.65
RTL4-201ENST00000340433 DCAF8Q5TAQ9 597 aa4.71□□□□□ -1.66
RTL4-201ENST00000340433 BAZ1BQ9UIG0 1483 aaKnown RBP4.7□□□□□ -1.66
RTL4-201ENST00000340433 RASEFQ8IZ41 740 aa4.7□□□□□ -1.66
RTL4-201ENST00000340433 NPM1P06748 294 aaKnown RBP eCLIP4.7□□□□□ -1.66
RTL4-201ENST00000340433 PRDM2Q13029 1718 aa4.69□□□□□ -1.66
RTL4-201ENST00000340433 RGL2O15211 777 aa4.69□□□□□ -1.66
RTL4-201ENST00000340433 GSE1Q14687 1217 aa4.69□□□□□ -1.66
RTL4-201ENST00000340433 TMEM121BQ9BXQ6 578 aaPredicted RBP4.69□□□□□ -1.66
RTL4-201ENST00000340433 FAM212AQ96EL1 285 aa4.69□□□□□ -1.66
RTL4-201ENST00000340433 CADPSQ9ULU8 1353 aa4.68□□□□□ -1.66
RTL4-201ENST00000340433 PHF12Q96QT6 1004 aa4.68□□□□□ -1.66
RTL4-201ENST00000340433 ARHGEF11O15085 1522 aa4.67□□□□□ -1.66
RTL4-201ENST00000340433 TRIM41Q8WV44 630 aa4.66□□□□□ -1.66
RTL4-201ENST00000340433 RSF1Q96T23 1441 aaPredicted RBP4.66□□□□□ -1.66
RTL4-201ENST00000340433 ST18O60284 1047 aa4.66□□□□□ -1.66
RTL4-201ENST00000340433 WDR97A6NE52 1622 aa4.65□□□□□ -1.66
RTL4-201ENST00000340433 TSPYL2Q9H2G4 693 aaPredicted RBP4.65□□□□□ -1.66
RTL4-201ENST00000340433 SNPHO15079 494 aa4.65□□□□□ -1.67
RTL4-201ENST00000340433 MROH2BQ7Z745 1585 aa4.64□□□□□ -1.67
RTL4-201ENST00000340433 CEP164Q9UPV0 1460 aa4.64□□□□□ -1.67
RTL4-201ENST00000340433 PYGBP11216 843 aa4.64□□□□□ -1.67
RTL4-201ENST00000340433 RNF25Q96BH1 459 aaPredicted RBP4.64□□□□□ -1.67
RTL4-201ENST00000340433 CFTRP13569 1480 aa4.64□□□□□ -1.67
RTL4-201ENST00000340433 MS4A3Q96HJ5 214 aa4.62□□□□□ -1.67
RTL4-201ENST00000340433 IFT140Q96RY7 1462 aa4.61□□□□□ -1.67
RTL4-201ENST00000340433 CHGAP10645 457 aaKnown RBP4.61□□□□□ -1.67
RTL4-201ENST00000340433 RIOK3O14730 519 aaKnown RBP4.6□□□□□ -1.67
RTL4-201ENST00000340433 CHRM1P11229 460 aaPredicted RBP4.6□□□□□ -1.67
RTL4-201ENST00000340433 ARAP1Q96P48 1450 aa4.6□□□□□ -1.67
RTL4-201ENST00000340433 FANCD2Q9BXW9 1451 aa4.6□□□□□ -1.67
RTL4-201ENST00000340433 URB2Q14146 1524 aaKnown RBP4.6□□□□□ -1.67
RTL4-201ENST00000340433 ATN1P54259 1190 aaPredicted RBP4.6□□□□□ -1.67
RTL4-201ENST00000340433 ABCC8Q09428 1581 aa4.6□□□□□ -1.67
RTL4-201ENST00000340433 CCDC61Q9Y6R9 512 aa4.59□□□□□ -1.67
RTL4-201ENST00000340433 CLASP1Q7Z460 1538 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms