RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 MYH16Q9H6N6 1097 aa8.96□□□□□ -0.97
PBRM1-202ENST00000337303 MTUS2Q5JR59 1369 aa8.95□□□□□ -0.98
PBRM1-202ENST00000337303 NOP58Q9Y2X3 529 aaKnown RBP8.94□□□□□ -0.98
PBRM1-202ENST00000337303 NCLP19338 710 aaKnown RBP8.94□□□□□ -0.98
PBRM1-202ENST00000337303 TSPY4P0CV99 314 aa8.94□□□□□ -0.98
PBRM1-202ENST00000337303 TSPY10P0CW01 314 aa8.94□□□□□ -0.98
PBRM1-202ENST00000337303 KDM2AQ9Y2K7 1162 aa8.93□□□□□ -0.98
PBRM1-202ENST00000337303 EEA1Q15075 1411 aa8.92□□□□□ -0.98
PBRM1-202ENST00000337303 MYO15BQ96JP2 1530 aa8.91□□□□□ -0.98
PBRM1-202ENST00000337303 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
PBRM1-202ENST00000337303 CEP162Q5TB80 1403 aa8.9□□□□□ -0.98
PBRM1-202ENST00000337303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.9□□□□□ -0.991e-6■■■□□ 19.2
PBRM1-202ENST00000337303 PTMAP06454 111 aaKnown RBP8.89□□□□□ -0.99
PBRM1-202ENST00000337303 ESF1Q9H501 851 aaKnown RBP8.89□□□□□ -0.99
PBRM1-202ENST00000337303 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-202ENST00000337303 LAS1LQ9Y4W2 734 aaKnown RBP8.89□□□□□ -0.99
PBRM1-202ENST00000337303 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
PBRM1-202ENST00000337303 SCRIBQ14160 1630 aa8.87□□□□□ -0.99
PBRM1-202ENST00000337303 GOLGA3Q08378 1498 aa8.87□□□□□ -0.99
PBRM1-202ENST00000337303 RRP7BPQ9NSQ0 103 aa8.87□□□□□ -0.99
PBRM1-202ENST00000337303 DNTTIP2Q5QJE6 756 aaKnown RBP8.86□□□□□ -0.99
PBRM1-202ENST00000337303 DEKP35659 375 aaKnown RBP8.85□□□□□ -0.99
PBRM1-202ENST00000337303 CDCA8Q53HL2 280 aa8.85□□□□□ -0.99
PBRM1-202ENST00000337303 RSF1Q96T23 1441 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-202ENST00000337303 RBM19Q9Y4C8 960 aaKnown RBP8.85□□□□□ -0.99
PBRM1-202ENST00000337303 TNIKQ9UKE5 1360 aa8.84□□□□□ -0.99
PBRM1-202ENST00000337303 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
PBRM1-202ENST00000337303 CFAP53Q96M91 514 aa8.84□□□□□ -0.99
PBRM1-202ENST00000337303 CCER2I3L3R5 266 aa8.83□□□□□ -1
PBRM1-202ENST00000337303 KNSTRNQ9Y448 316 aa8.83□□□□□ -1
PBRM1-202ENST00000337303 RGS3P49796 1198 aa8.83□□□□□ -1
PBRM1-202ENST00000337303 TIMELESSQ9UNS1 1208 aa8.83□□□□□ -1
PBRM1-202ENST00000337303 CDK11BP21127 795 aaKnown RBP8.82□□□□□ -1
PBRM1-202ENST00000337303 CASC1Q6TDU7 716 aa8.82□□□□□ -1
PBRM1-202ENST00000337303 FTSJ3Q8IY81 847 aaKnown RBP8.82□□□□□ -1
PBRM1-202ENST00000337303 ZRSR1Q15695 479 aaKnown RBP8.82□□□□□ -1
PBRM1-202ENST00000337303 L1TD1Q5T7N2 865 aaKnown RBP8.81□□□□□ -1
PBRM1-202ENST00000337303 CARD11Q9BXL7 1154 aa8.8□□□□□ -1
PBRM1-202ENST00000337303 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
PBRM1-202ENST00000337303 SENP3-EIF4A1A0A087X0R7 540 aa8.79□□□□□ -1
PBRM1-202ENST00000337303 MS4A1P11836 297 aa8.79□□□□□ -1
PBRM1-202ENST00000337303 CHMP4BQ9H444 224 aaKnown RBP8.79□□□□□ -1
PBRM1-202ENST00000337303 SIN3AQ96ST3 1273 aa8.79□□□□□ -1
PBRM1-202ENST00000337303 RGL3Q3MIN7 710 aa8.78□□□□□ -1
PBRM1-202ENST00000337303 HSP90AB1P08238 724 aaKnown RBP8.78□□□□□ -1
PBRM1-202ENST00000337303 CEP164Q9UPV0 1460 aa8.77□□□□□ -1.01
PBRM1-202ENST00000337303 FRAT1Q92837 279 aaPredicted RBP8.75□□□□□ -1.01
PBRM1-202ENST00000337303 NUDCQ9Y266 331 aa8.75□□□□□ -1.01
PBRM1-202ENST00000337303 HSCBQ8IWL3 235 aa8.75□□□□□ -1.01
PBRM1-202ENST00000337303 MAPK8IP3Q9UPT6 1336 aa8.75□□□□□ -1.01
PBRM1-202ENST00000337303 NRDCO43847 1150 aa8.75□□□□□ -1.01
PBRM1-202ENST00000337303 PLCB2Q00722 1185 aa8.75□□□□□ -1.01
PBRM1-202ENST00000337303 TSHZ2Q9NRE2 1034 aa8.75□□□□□ -1.01
PBRM1-202ENST00000337303 MSNP26038 577 aaKnown RBP8.74□□□□□ -1.01
PBRM1-202ENST00000337303 NEUROD2Q15784 382 aa8.74□□□□□ -1.01
PBRM1-202ENST00000337303 PLEKHD1A6NEE1 506 aa8.74□□□□□ -1.01
PBRM1-202ENST00000337303 CHAF1AQ13111 956 aaPredicted RBP8.74□□□□□ -1.01
PBRM1-202ENST00000337303 WRNQ14191 1432 aaPredicted RBP eCLIP8.74□□□□□ -1.01
PBRM1-202ENST00000337303 CCNB3Q8WWL7 1395 aa8.74□□□□□ -1.01
PBRM1-202ENST00000337303 GOLGA6L6A8MZA4 724 aa8.73□□□□□ -1.01
PBRM1-202ENST00000337303 CFDP1Q9UEE9 299 aaPredicted RBP8.73□□□□□ -1.01
PBRM1-202ENST00000337303 TCERG1O14776 1098 aaKnown RBP8.72□□□□□ -1.01
PBRM1-202ENST00000337303 PNNQ9H307 717 aaKnown RBP8.71□□□□□ -1.01
PBRM1-202ENST00000337303 KIF27Q86VH2 1401 aa8.71□□□□□ -1.02
PBRM1-202ENST00000337303 CFAP44Q96MT7 982 aa8.71□□□□□ -1.02
PBRM1-202ENST00000337303 TPRNQ4KMQ1 711 aa8.7□□□□□ -1.02
PBRM1-202ENST00000337303 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
PBRM1-202ENST00000337303 PTMSP20962 102 aa8.69□□□□□ -1.02
PBRM1-202ENST00000337303 CC2D1BQ5T0F9 858 aaKnown RBP8.69□□□□□ -1.02
PBRM1-202ENST00000337303 GOLGA6L4A6NEF3 574 aa8.68□□□□□ -1.02
PBRM1-202ENST00000337303 IPO9Q96P70 1041 aaKnown RBP8.68□□□□□ -1.02
PBRM1-202ENST00000337303 PPP1R15AO75807 674 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-202ENST00000337303 TMF1P82094 1093 aa8.68□□□□□ -1.02
PBRM1-202ENST00000337303 GBP4Q96PP9 640 aa8.68□□□□□ -1.02
PBRM1-202ENST00000337303 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
PBRM1-202ENST00000337303 HSPA5P11021 654 aaKnown RBP8.66□□□□□ -1.02
PBRM1-202ENST00000337303 FGD1P98174 961 aa8.66□□□□□ -1.02
PBRM1-202ENST00000337303 FHAD1B1AJZ9 1412 aa8.66□□□□□ -1.02
PBRM1-202ENST00000337303 MCCP23508 829 aa8.66□□□□□ -1.02
PBRM1-202ENST00000337303 KCNJ4P48050 445 aa8.66□□□□□ -1.02
PBRM1-202ENST00000337303 SETD5Q9C0A6 1442 aa8.66□□□□□ -1.02
PBRM1-202ENST00000337303 PLPPR3Q6T4P5 718 aa8.65□□□□□ -1.02
PBRM1-202ENST00000337303 U2SURPO15042 1029 aaKnown RBP8.65□□□□□ -1.03
PBRM1-202ENST00000337303 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.03
PBRM1-202ENST00000337303 C14orf37Q86TY3 774 aa8.65□□□□□ -1.03
PBRM1-202ENST00000337303 USP35Q9P2H5 1018 aa8.65□□□□□ -1.03
PBRM1-202ENST00000337303 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
PBRM1-202ENST00000337303 SPRYD3Q8NCJ5 442 aa8.64□□□□□ -1.03
PBRM1-202ENST00000337303 KCNH8Q96L42 1107 aa8.64□□□□□ -1.03
PBRM1-202ENST00000337303 SLKQ9H2G2 1235 aaPredicted RBP8.64□□□□□ -1.03
PBRM1-202ENST00000337303 DCAF11Q8TEB1 546 aa8.63□□□□□ -1.03
PBRM1-202ENST00000337303 GOLGA6L3A6NEY3 463 aa8.63□□□□□ -1.03
PBRM1-202ENST00000337303 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
PBRM1-202ENST00000337303 KTN1Q86UP2 1357 aaKnown RBP8.63□□□□□ -1.03
PBRM1-202ENST00000337303 ZBTB7CA1YPR0 619 aa8.63□□□□□ -1.03
PBRM1-202ENST00000337303 ARID4BQ4LE39 1312 aaPredicted RBP8.63□□□□□ -1.03
PBRM1-202ENST00000337303 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
PBRM1-202ENST00000337303 IPO8O15397 1037 aaKnown RBP8.62□□□□□ -1.03
PBRM1-202ENST00000337303 RALBP1Q15311 655 aa8.62□□□□□ -1.03
PBRM1-202ENST00000337303 RWDD1Q9H446 243 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms