RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
SEC23B-202ENST00000336714 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.04
SEC23B-202ENST00000336714 VPS8Q8N3P4 1428 aa15.27■□□□□ 0.03
SEC23B-202ENST00000336714 ERICH6BQ5W0A0 696 aa15.26■□□□□ 0.03
SEC23B-202ENST00000336714 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
SEC23B-202ENST00000336714 UBE2Q2Q8WVN8 375 aa15.23■□□□□ 0.03
SEC23B-202ENST00000336714 NEFMP07197 916 aa15.21■□□□□ 0.03
SEC23B-202ENST00000336714 BRPF3Q9ULD4 1205 aa15.21■□□□□ 0.03
SEC23B-202ENST00000336714 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
SEC23B-202ENST00000336714 FAM50AQ14320 339 aaKnown RBP15.2■□□□□ 0.02
SEC23B-202ENST00000336714 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
SEC23B-202ENST00000336714 RAB3GAP2Q9H2M9 1393 aa15.17■□□□□ 0.02
SEC23B-202ENST00000336714 CCDC184Q52MB2 194 aa15.17■□□□□ 0.02
SEC23B-202ENST00000336714 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
SEC23B-202ENST00000336714 NACADO15069 1562 aa15.16■□□□□ 0.02
SEC23B-202ENST00000336714 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
SEC23B-202ENST00000336714 EEA1Q15075 1411 aa15.12■□□□□ 0.01
SEC23B-202ENST00000336714 RAPGEF2Q9Y4G8 1499 aa15.11■□□□□ 0.01
SEC23B-202ENST00000336714 CEP164Q9UPV0 1460 aa15.1■□□□□ 0.01
SEC23B-202ENST00000336714 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
SEC23B-202ENST00000336714 MRS2Q9HD23 443 aa15.07■□□□□ 0
SEC23B-202ENST00000336714 POLR3GLQ9BT43 218 aa15.04■□□□□ -0
SEC23B-202ENST00000336714 KIF21BO75037 1637 aa15.04■□□□□ -0
SEC23B-202ENST00000336714 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
SEC23B-202ENST00000336714 PKNOX2Q96KN3 472 aa15.03■□□□□ -0
SEC23B-202ENST00000336714 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
SEC23B-202ENST00000336714 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
SEC23B-202ENST00000336714 MAPKBP1O60336 1514 aa15□□□□□ -0.01
SEC23B-202ENST00000336714 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
SEC23B-202ENST00000336714 ARXQ96QS3 562 aa14.97□□□□□ -0.01
SEC23B-202ENST00000336714 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
SEC23B-202ENST00000336714 SKAP1Q86WV1 359 aa14.97□□□□□ -0.01
SEC23B-202ENST00000336714 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
SEC23B-202ENST00000336714 WASHC2AQ641Q2 1341 aa14.94□□□□□ -0.02
SEC23B-202ENST00000336714 P3H3Q8IVL6 736 aa14.93□□□□□ -0.02
SEC23B-202ENST00000336714 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
SEC23B-202ENST00000336714 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
SEC23B-202ENST00000336714 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
SEC23B-202ENST00000336714 HSPA5P11021 654 aaKnown RBP14.91□□□□□ -0.02
SEC23B-202ENST00000336714 GSE1Q14687 1217 aa14.91□□□□□ -0.02
SEC23B-202ENST00000336714 DAXXQ9UER7 740 aaPredicted RBP14.88□□□□□ -0.03
SEC23B-202ENST00000336714 PDE4AP27815 886 aa14.86□□□□□ -0.03
SEC23B-202ENST00000336714 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
SEC23B-202ENST00000336714 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
SEC23B-202ENST00000336714 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
SEC23B-202ENST00000336714 NFKBIBQ15653 356 aa14.85□□□□□ -0.03
SEC23B-202ENST00000336714 ZBED9Q6R2W3 1325 aa14.84□□□□□ -0.03
SEC23B-202ENST00000336714 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
SEC23B-202ENST00000336714 ARID4BQ4LE39 1312 aaPredicted RBP14.83□□□□□ -0.03
SEC23B-202ENST00000336714 WASHC2CQ9Y4E1 1318 aa14.83□□□□□ -0.04
SEC23B-202ENST00000336714 EXOC6Q8TAG9 804 aa14.82□□□□□ -0.04
SEC23B-202ENST00000336714 C11orf95C9JLR9 678 aaPredicted RBP14.82□□□□□ -0.04
SEC23B-202ENST00000336714 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
SEC23B-202ENST00000336714 USP35Q9P2H5 1018 aa14.81□□□□□ -0.04
SEC23B-202ENST00000336714 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
SEC23B-202ENST00000336714 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
SEC23B-202ENST00000336714 ZMYND15Q9H091 742 aa14.79□□□□□ -0.04
SEC23B-202ENST00000336714 EIF4G2P78344 907 aaKnown RBP eCLIP14.78□□□□□ -0.04
SEC23B-202ENST00000336714 DCAF11Q8TEB1 546 aa14.78□□□□□ -0.04
SEC23B-202ENST00000336714 NUDCQ9Y266 331 aa14.78□□□□□ -0.04
SEC23B-202ENST00000336714 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.04
SEC23B-202ENST00000336714 CUX2O14529 1486 aa14.77□□□□□ -0.05
SEC23B-202ENST00000336714 RSPH6AQ9H0K4 717 aa14.77□□□□□ -0.05
SEC23B-202ENST00000336714 FRAT2O75474 233 aaPredicted RBP14.76□□□□□ -0.05
SEC23B-202ENST00000336714 NAP1L5Q96NT1 182 aaPredicted RBP14.75□□□□□ -0.05
SEC23B-202ENST00000336714 FOXD1Q16676 465 aa14.74□□□□□ -0.05
SEC23B-202ENST00000336714 GLIPR1L2Q4G1C9 344 aa14.74□□□□□ -0.05
SEC23B-202ENST00000336714 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
SEC23B-202ENST00000336714 BACH2Q9BYV9 841 aa14.73□□□□□ -0.05
SEC23B-202ENST00000336714 PLIN1O60240 522 aa14.73□□□□□ -0.05
SEC23B-202ENST00000336714 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
SEC23B-202ENST00000336714 ZNF326Q5BKZ1 582 aaKnown RBP14.72□□□□□ -0.05
SEC23B-202ENST00000336714 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
SEC23B-202ENST00000336714 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
SEC23B-202ENST00000336714 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
SEC23B-202ENST00000336714 TMC1Q8TDI8 760 aa14.67□□□□□ -0.06
SEC23B-202ENST00000336714 RRAGDQ9NQL2 400 aaPredicted RBP14.66□□□□□ -0.06
SEC23B-202ENST00000336714 PODXL2Q9NZ53 605 aa14.66□□□□□ -0.06
SEC23B-202ENST00000336714 CNTLNQ9NXG0 1405 aa14.66□□□□□ -0.06
SEC23B-202ENST00000336714 FAM43AQ8N2R8 423 aa14.65□□□□□ -0.06
SEC23B-202ENST00000336714 DDRGK1Q96HY6 314 aa14.65□□□□□ -0.06
SEC23B-202ENST00000336714 POGKQ9P215 609 aa14.64□□□□□ -0.07
SEC23B-202ENST00000336714 HSP90AA2PQ14568 343 aaPredicted RBP14.63□□□□□ -0.07
SEC23B-202ENST00000336714 RGS3P49796 1198 aa14.63□□□□□ -0.07
SEC23B-202ENST00000336714 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
SEC23B-202ENST00000336714 SMG6Q86US8 1419 aaKnown RBP14.63□□□□□ -0.07
SEC23B-202ENST00000336714 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
SEC23B-202ENST00000336714 A0A0U1RQG5 324 aaPredicted RBP14.62□□□□□ -0.07
SEC23B-202ENST00000336714 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
SEC23B-202ENST00000336714 CCDC7Q96M83 1385 aa14.61□□□□□ -0.07
SEC23B-202ENST00000336714 SLKQ9H2G2 1235 aaPredicted RBP14.61□□□□□ -0.07
SEC23B-202ENST00000336714 RCAN3Q9UKA8 241 aa14.6□□□□□ -0.07
SEC23B-202ENST00000336714 GZF1Q9H116 711 aaPredicted RBP14.6□□□□□ -0.07
SEC23B-202ENST00000336714 KIF7Q2M1P5 1343 aa14.59□□□□□ -0.07
SEC23B-202ENST00000336714 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
SEC23B-202ENST00000336714 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
SEC23B-202ENST00000336714 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
SEC23B-202ENST00000336714 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
SEC23B-202ENST00000336714 PNNQ9H307 717 aaKnown RBP14.57□□□□□ -0.08
SEC23B-202ENST00000336714 CRBNQ96SW2 442 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms