RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
HLCS-201ENST00000336648 PTMAP06454 111 aaKnown RBP17.16■□□□□ 0.34
HLCS-201ENST00000336648 DNTTIP2Q5QJE6 756 aaKnown RBP17.15■□□□□ 0.34
HLCS-201ENST00000336648 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
HLCS-201ENST00000336648 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
HLCS-201ENST00000336648 CASC1Q6TDU7 716 aa17.13■□□□□ 0.33
HLCS-201ENST00000336648 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
HLCS-201ENST00000336648 ZRSR1Q15695 479 aaKnown RBP17.11■□□□□ 0.33
HLCS-201ENST00000336648 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
HLCS-201ENST00000336648 PPM1GO15355 546 aaPredicted RBP17.1■□□□□ 0.33
HLCS-201ENST00000336648 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
HLCS-201ENST00000336648 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.32
HLCS-201ENST00000336648 EEA1Q15075 1411 aa17.08■□□□□ 0.32
HLCS-201ENST00000336648 CLIP1P30622 1438 aa17.05■□□□□ 0.32
HLCS-201ENST00000336648 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.31
HLCS-201ENST00000336648 MIER1Q8N108 512 aa17.02■□□□□ 0.31
HLCS-201ENST00000336648 MS4A1P11836 297 aa17■□□□□ 0.31
HLCS-201ENST00000336648 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
HLCS-201ENST00000336648 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
HLCS-201ENST00000336648 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
HLCS-201ENST00000336648 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
HLCS-201ENST00000336648 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
HLCS-201ENST00000336648 PLEKHD1A6NEE1 506 aa16.97■□□□□ 0.31
HLCS-201ENST00000336648 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.31
HLCS-201ENST00000336648 AMER1Q5JTC6 1135 aaPredicted RBP16.96■□□□□ 0.31
HLCS-201ENST00000336648 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
HLCS-201ENST00000336648 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
HLCS-201ENST00000336648 IRX6P78412 446 aaPredicted RBP16.94■□□□□ 0.3
HLCS-201ENST00000336648 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
HLCS-201ENST00000336648 NRDCO43847 1150 aa16.93■□□□□ 0.3
HLCS-201ENST00000336648 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
HLCS-201ENST00000336648 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
HLCS-201ENST00000336648 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
HLCS-201ENST00000336648 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
HLCS-201ENST00000336648 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
HLCS-201ENST00000336648 PPP4R2Q9NY27 417 aa16.91■□□□□ 0.3
HLCS-201ENST00000336648 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
HLCS-201ENST00000336648 CHAF1AQ13111 956 aaPredicted RBP16.89■□□□□ 0.29
HLCS-201ENST00000336648 A0A0G2JS52 829 aa16.89■□□□□ 0.29
HLCS-201ENST00000336648 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
HLCS-201ENST00000336648 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
HLCS-201ENST00000336648 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
HLCS-201ENST00000336648 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
HLCS-201ENST00000336648 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
HLCS-201ENST00000336648 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
HLCS-201ENST00000336648 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
HLCS-201ENST00000336648 HSP90AB1P08238 724 aaKnown RBP16.8■□□□□ 0.28
HLCS-201ENST00000336648 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
HLCS-201ENST00000336648 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
HLCS-201ENST00000336648 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
HLCS-201ENST00000336648 NOP58Q9Y2X3 529 aaKnown RBP16.79■□□□□ 0.28
HLCS-201ENST00000336648 MSNP26038 577 aaKnown RBP16.79■□□□□ 0.28
HLCS-201ENST00000336648 TNNT3P45378 269 aaPredicted RBP16.78■□□□□ 0.28
HLCS-201ENST00000336648 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
HLCS-201ENST00000336648 TPRNQ4KMQ1 711 aa16.76■□□□□ 0.27
HLCS-201ENST00000336648 FGD1P98174 961 aa16.76■□□□□ 0.27
HLCS-201ENST00000336648 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
HLCS-201ENST00000336648 TNIKQ9UKE5 1360 aa16.75■□□□□ 0.27
HLCS-201ENST00000336648 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
HLCS-201ENST00000336648 MCCP23508 829 aa16.75■□□□□ 0.27
HLCS-201ENST00000336648 PTMSP20962 102 aa16.75■□□□□ 0.27
HLCS-201ENST00000336648 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
HLCS-201ENST00000336648 POGKQ9P215 609 aa16.74■□□□□ 0.27
HLCS-201ENST00000336648 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
HLCS-201ENST00000336648 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
HLCS-201ENST00000336648 OS9Q13438 667 aaPredicted RBP16.74■□□□□ 0.27
HLCS-201ENST00000336648 GOLGA6L4A6NEF3 574 aa16.73■□□□□ 0.27
HLCS-201ENST00000336648 KCNJ4P48050 445 aa16.72■□□□□ 0.27
HLCS-201ENST00000336648 TULP1O00294 542 aaPredicted RBP16.72■□□□□ 0.27
HLCS-201ENST00000336648 TMF1P82094 1093 aa16.71■□□□□ 0.27
HLCS-201ENST00000336648 RGS3P49796 1198 aa16.71■□□□□ 0.26
HLCS-201ENST00000336648 HDGFP51858 240 aaKnown RBP16.7■□□□□ 0.26
HLCS-201ENST00000336648 FRAT1Q92837 279 aaPredicted RBP16.69■□□□□ 0.26
HLCS-201ENST00000336648 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
HLCS-201ENST00000336648 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
HLCS-201ENST00000336648 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
HLCS-201ENST00000336648 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
HLCS-201ENST00000336648 KANK1Q14678 1352 aa16.67■□□□□ 0.26
HLCS-201ENST00000336648 ARID4BQ4LE39 1312 aaPredicted RBP16.67■□□□□ 0.26
HLCS-201ENST00000336648 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
HLCS-201ENST00000336648 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
HLCS-201ENST00000336648 DEKP35659 375 aaKnown RBP16.64■□□□□ 0.25
HLCS-201ENST00000336648 CHMP4AQ9BY43 222 aa16.64■□□□□ 0.25
HLCS-201ENST00000336648 NPHP1O15259 732 aa16.63■□□□□ 0.25
HLCS-201ENST00000336648 U2SURPO15042 1029 aaKnown RBP16.62■□□□□ 0.25
HLCS-201ENST00000336648 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
HLCS-201ENST00000336648 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
HLCS-201ENST00000336648 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
HLCS-201ENST00000336648 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
HLCS-201ENST00000336648 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
HLCS-201ENST00000336648 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
HLCS-201ENST00000336648 HTATSF1O43719 755 aaKnown RBP16.6■□□□□ 0.25
HLCS-201ENST00000336648 CALRP27797 417 aaKnown RBP16.59■□□□□ 0.25
HLCS-201ENST00000336648 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.25
HLCS-201ENST00000336648 GBP4Q96PP9 640 aa16.58■□□□□ 0.24
HLCS-201ENST00000336648 CC2D1BQ5T0F9 858 aaKnown RBP16.58■□□□□ 0.24
HLCS-201ENST00000336648 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
HLCS-201ENST00000336648 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
HLCS-201ENST00000336648 LMOD2Q6P5Q4 547 aa16.55■□□□□ 0.24
HLCS-201ENST00000336648 KIAA2012Q0VF49 1180 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms