RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 IRX6P78412 446 aaPredicted RBP21.21■□□□□ 0.99
HDAC5-202ENST00000336057 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
HDAC5-202ENST00000336057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.984e-6■□□□□ 8.4
HDAC5-202ENST00000336057 CCNB3Q8WWL7 1395 aa21.19■□□□□ 0.98
HDAC5-202ENST00000336057 VPS8Q8N3P4 1428 aa21.17■□□□□ 0.98
HDAC5-202ENST00000336057 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
HDAC5-202ENST00000336057 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
HDAC5-202ENST00000336057 CHGAP10645 457 aaKnown RBP21.14■□□□□ 0.97
HDAC5-202ENST00000336057 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
HDAC5-202ENST00000336057 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
HDAC5-202ENST00000336057 WDR43Q15061 677 aaKnown RBP eCLIP21.07■□□□□ 0.96
HDAC5-202ENST00000336057 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
HDAC5-202ENST00000336057 CARMIL1Q5VZK9 1371 aa21.06■□□□□ 0.96
HDAC5-202ENST00000336057 WIZO95785 1651 aa21.05■□□□□ 0.96
HDAC5-202ENST00000336057 TIMELESSQ9UNS1 1208 aa21.03■□□□□ 0.96
HDAC5-202ENST00000336057 PLEKHD1A6NEE1 506 aa21.03■□□□□ 0.96
HDAC5-202ENST00000336057 CUX2O14529 1486 aa21.03■□□□□ 0.96
HDAC5-202ENST00000336057 SUPT16HQ9Y5B9 1047 aaKnown RBP21.02■□□□□ 0.96
HDAC5-202ENST00000336057 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
HDAC5-202ENST00000336057 CFDP1Q9UEE9 299 aaPredicted RBP21.01■□□□□ 0.95
HDAC5-202ENST00000336057 UPF2Q9HAU5 1272 aaKnown RBP21.01■□□□□ 0.95
HDAC5-202ENST00000336057 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
HDAC5-202ENST00000336057 SLC24A1O60721 1099 aa20.99■□□□□ 0.95
HDAC5-202ENST00000336057 NBR1Q14596 966 aa20.99■□□□□ 0.95
HDAC5-202ENST00000336057 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
HDAC5-202ENST00000336057 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
HDAC5-202ENST00000336057 STAG3Q9UJ98 1225 aa20.93■□□□□ 0.94
HDAC5-202ENST00000336057 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
HDAC5-202ENST00000336057 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
HDAC5-202ENST00000336057 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
HDAC5-202ENST00000336057 ANP32EQ9BTT0 268 aa20.88■□□□□ 0.93
HDAC5-202ENST00000336057 CCER2I3L3R5 266 aa20.88■□□□□ 0.93
HDAC5-202ENST00000336057 ESF1Q9H501 851 aaKnown RBP20.87■□□□□ 0.93
HDAC5-202ENST00000336057 HSP90AA1P07900 732 aaKnown RBP20.87■□□□□ 0.93
HDAC5-202ENST00000336057 PPP4R2Q9NY27 417 aa20.86■□□□□ 0.93
HDAC5-202ENST00000336057 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
HDAC5-202ENST00000336057 ARHGAP35Q9NRY4 1499 aa20.85■□□□□ 0.93
HDAC5-202ENST00000336057 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
HDAC5-202ENST00000336057 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
HDAC5-202ENST00000336057 CDCA8Q53HL2 280 aa20.78■□□□□ 0.92
HDAC5-202ENST00000336057 KNSTRNQ9Y448 316 aa20.77■□□□□ 0.92
HDAC5-202ENST00000336057 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
HDAC5-202ENST00000336057 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
HDAC5-202ENST00000336057 ANP32BQ92688 251 aaKnown RBP20.76■□□□□ 0.91
HDAC5-202ENST00000336057 DDRGK1Q96HY6 314 aa20.74■□□□□ 0.91
HDAC5-202ENST00000336057 HSPA5P11021 654 aaKnown RBP20.74■□□□□ 0.91
HDAC5-202ENST00000336057 RUSC2Q8N2Y8 1516 aa20.74■□□□□ 0.91
HDAC5-202ENST00000336057 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
HDAC5-202ENST00000336057 EIF5BO60841 1220 aaKnown RBP20.71■□□□□ 0.91
HDAC5-202ENST00000336057 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
HDAC5-202ENST00000336057 PPP1R15AO75807 674 aaPredicted RBP20.69■□□□□ 0.9
HDAC5-202ENST00000336057 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
HDAC5-202ENST00000336057 ATAD2BQ9ULI0 1458 aa20.65■□□□□ 0.9
HDAC5-202ENST00000336057 DCAF11Q8TEB1 546 aa20.65■□□□□ 0.9
HDAC5-202ENST00000336057 DHX57Q6P158 1386 aaKnown RBP20.65■□□□□ 0.9
HDAC5-202ENST00000336057 CFAP53Q96M91 514 aa20.63■□□□□ 0.89
HDAC5-202ENST00000336057 BECN1Q14457 450 aa20.62■□□□□ 0.89
HDAC5-202ENST00000336057 FOXD1Q16676 465 aa20.61■□□□□ 0.89
HDAC5-202ENST00000336057 MPHOSPH9Q99550 1183 aa20.61■□□□□ 0.89
HDAC5-202ENST00000336057 CC2D1BQ5T0F9 858 aaKnown RBP20.61■□□□□ 0.89
HDAC5-202ENST00000336057 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
HDAC5-202ENST00000336057 RBM19Q9Y4C8 960 aaKnown RBP20.59■□□□□ 0.89
HDAC5-202ENST00000336057 MYH16Q9H6N6 1097 aa20.59■□□□□ 0.89
HDAC5-202ENST00000336057 PKD2Q13563 968 aa20.58■□□□□ 0.88
HDAC5-202ENST00000336057 ARXQ96QS3 562 aa20.58■□□□□ 0.88
HDAC5-202ENST00000336057 NOP58Q9Y2X3 529 aaKnown RBP20.57■□□□□ 0.88
HDAC5-202ENST00000336057 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
HDAC5-202ENST00000336057 FHOD3Q2V2M9 1422 aa20.57■□□□□ 0.88
HDAC5-202ENST00000336057 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
HDAC5-202ENST00000336057 TMF1P82094 1093 aa20.56■□□□□ 0.88
HDAC5-202ENST00000336057 PPM1GO15355 546 aaPredicted RBP20.56■□□□□ 0.88
HDAC5-202ENST00000336057 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
HDAC5-202ENST00000336057 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
HDAC5-202ENST00000336057 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
HDAC5-202ENST00000336057 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
HDAC5-202ENST00000336057 NEUROD2Q15784 382 aa20.52■□□□□ 0.88
HDAC5-202ENST00000336057 RGS3P49796 1198 aa20.49■□□□□ 0.87
HDAC5-202ENST00000336057 L3MBTL2Q969R5 705 aa20.49■□□□□ 0.87
HDAC5-202ENST00000336057 TSHZ2Q9NRE2 1034 aa20.48■□□□□ 0.87
HDAC5-202ENST00000336057 FTSJ3Q8IY81 847 aaKnown RBP20.48■□□□□ 0.87
HDAC5-202ENST00000336057 LAS1LQ9Y4W2 734 aaKnown RBP20.46■□□□□ 0.87
HDAC5-202ENST00000336057 CARMIL2Q6F5E8 1435 aa20.44■□□□□ 0.86
HDAC5-202ENST00000336057 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
HDAC5-202ENST00000336057 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
HDAC5-202ENST00000336057 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
HDAC5-202ENST00000336057 NUP155O75694 1391 aa20.43■□□□□ 0.86
HDAC5-202ENST00000336057 ANKRD30AQ9BXX3 1397 aa20.43■□□□□ 0.86
HDAC5-202ENST00000336057 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
HDAC5-202ENST00000336057 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
HDAC5-202ENST00000336057 RALBP1Q15311 655 aa20.41■□□□□ 0.86
HDAC5-202ENST00000336057 KANK1Q14678 1352 aa20.39■□□□□ 0.85
HDAC5-202ENST00000336057 ROCK2O75116 1388 aaKnown RBP20.38■□□□□ 0.85
HDAC5-202ENST00000336057 RCAN3Q9UKA8 241 aa20.36■□□□□ 0.85
HDAC5-202ENST00000336057 POGKQ9P215 609 aa20.35■□□□□ 0.85
HDAC5-202ENST00000336057 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
HDAC5-202ENST00000336057 GOLGA6L22H0YM25 854 aa20.35■□□□□ 0.85
HDAC5-202ENST00000336057 MS4A1P11836 297 aa20.34■□□□□ 0.85
HDAC5-202ENST00000336057 GLIPR1L2Q4G1C9 344 aa20.33■□□□□ 0.84
HDAC5-202ENST00000336057 KIF21BO75037 1637 aa20.33■□□□□ 0.84
HDAC5-202ENST00000336057 U2SURPO15042 1029 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms