RNA–Protein interactions for RNA: ENST00000335221.9

BPTF-203, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5 BASIC

Gene BPTF, Length 2,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-203ENST00000335221 NPM2Q86SE8 214 aaKnown RBP12.22□□□□□ -0.45
BPTF-203ENST00000335221 HSP90AA2PQ14568 343 aaPredicted RBP12.21□□□□□ -0.46
BPTF-203ENST00000335221 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.46
BPTF-203ENST00000335221 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
BPTF-203ENST00000335221 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
BPTF-203ENST00000335221 CHMP4BQ9H444 224 aaKnown RBP12.16□□□□□ -0.46
BPTF-203ENST00000335221 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
BPTF-203ENST00000335221 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
BPTF-203ENST00000335221 C14orf37Q86TY3 774 aa12.13□□□□□ -0.47
BPTF-203ENST00000335221 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
BPTF-203ENST00000335221 WASHC2CQ9Y4E1 1318 aa12.08□□□□□ -0.48
BPTF-203ENST00000335221 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
BPTF-203ENST00000335221 NEFMP07197 916 aa12.07□□□□□ -0.48
BPTF-203ENST00000335221 FAM43AQ8N2R8 423 aa12.07□□□□□ -0.48
BPTF-203ENST00000335221 WASHC2AQ641Q2 1341 aa12.05□□□□□ -0.48
BPTF-203ENST00000335221 HSP90AA1P07900 732 aaKnown RBP12.05□□□□□ -0.48
BPTF-203ENST00000335221 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
BPTF-203ENST00000335221 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
BPTF-203ENST00000335221 RGS3P49796 1198 aa12.01□□□□□ -0.49
BPTF-203ENST00000335221 CNGB1Q14028 1251 aaPredicted RBP12.01□□□□□ -0.49
BPTF-203ENST00000335221 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
BPTF-203ENST00000335221 USP35Q9P2H5 1018 aa12□□□□□ -0.49
BPTF-203ENST00000335221 PRDM4Q9UKN5 801 aa12□□□□□ -0.49
BPTF-203ENST00000335221 IRX6P78412 446 aaPredicted RBP11.99□□□□□ -0.49
BPTF-203ENST00000335221 CALD1Q05682 793 aaKnown RBP11.98□□□□□ -0.49
BPTF-203ENST00000335221 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
BPTF-203ENST00000335221 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
BPTF-203ENST00000335221 BCCIPQ9P287 314 aaKnown RBP eCLIP11.96□□□□□ -0.49
BPTF-203ENST00000335221 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
BPTF-203ENST00000335221 ABCC9O60706 1549 aa11.95□□□□□ -0.5
BPTF-203ENST00000335221 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
BPTF-203ENST00000335221 ANP32AP39687 249 aaKnown RBP11.93□□□□□ -0.5
BPTF-203ENST00000335221 TEX2Q8IWB9 1127 aa11.92□□□□□ -0.5
BPTF-203ENST00000335221 IPO9Q96P70 1041 aaKnown RBP11.92□□□□□ -0.5
BPTF-203ENST00000335221 CDK11BP21127 795 aaKnown RBP11.91□□□□□ -0.5
BPTF-203ENST00000335221 GSE1Q14687 1217 aa11.91□□□□□ -0.5
BPTF-203ENST00000335221 SECISBP2LQ93073 1101 aaKnown RBP11.91□□□□□ -0.5
BPTF-203ENST00000335221 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
BPTF-203ENST00000335221 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
BPTF-203ENST00000335221 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
BPTF-203ENST00000335221 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
BPTF-203ENST00000335221 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
BPTF-203ENST00000335221 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
BPTF-203ENST00000335221 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
BPTF-203ENST00000335221 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
BPTF-203ENST00000335221 FOXD1Q16676 465 aa11.84□□□□□ -0.51
BPTF-203ENST00000335221 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
BPTF-203ENST00000335221 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.83□□□□□ -0.52
BPTF-203ENST00000335221 PDCL3Q9H2J4 239 aa11.82□□□□□ -0.52
BPTF-203ENST00000335221 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
BPTF-203ENST00000335221 CNPY4Q8N129 248 aa11.81□□□□□ -0.52
BPTF-203ENST00000335221 PNNQ9H307 717 aaKnown RBP11.8□□□□□ -0.52
BPTF-203ENST00000335221 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
BPTF-203ENST00000335221 POLR3GLQ9BT43 218 aa11.79□□□□□ -0.52
BPTF-203ENST00000335221 ARID4BQ4LE39 1312 aaPredicted RBP11.78□□□□□ -0.52
BPTF-203ENST00000335221 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
BPTF-203ENST00000335221 NACADO15069 1562 aa11.77□□□□□ -0.53
BPTF-203ENST00000335221 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
BPTF-203ENST00000335221 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
BPTF-203ENST00000335221 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
BPTF-203ENST00000335221 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
BPTF-203ENST00000335221 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
BPTF-203ENST00000335221 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
BPTF-203ENST00000335221 WWC1Q8IX03 1113 aa11.73□□□□□ -0.53
BPTF-203ENST00000335221 PPP4R2Q9NY27 417 aa11.71□□□□□ -0.53
BPTF-203ENST00000335221 TMEM51Q9NW97 253 aa11.71□□□□□ -0.54
BPTF-203ENST00000335221 ZHX1Q9UKY1 873 aaPredicted RBP11.71□□□□□ -0.54
BPTF-203ENST00000335221 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
BPTF-203ENST00000335221 DCAF11Q8TEB1 546 aa11.7□□□□□ -0.54
BPTF-203ENST00000335221 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
BPTF-203ENST00000335221 KCNG1Q9UIX4 513 aa11.69□□□□□ -0.54
BPTF-203ENST00000335221 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
BPTF-203ENST00000335221 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
BPTF-203ENST00000335221 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
BPTF-203ENST00000335221 TRIM52Q96A61 297 aa11.65□□□□□ -0.54
BPTF-203ENST00000335221 IRX3P78415 501 aaPredicted RBP11.65□□□□□ -0.54
BPTF-203ENST00000335221 CLCN1P35523 988 aa11.64□□□□□ -0.55
BPTF-203ENST00000335221 CECR2Q9BXF3 1484 aa11.64□□□□□ -0.55
BPTF-203ENST00000335221 TPM2P07951 284 aa11.63□□□□□ -0.55
BPTF-203ENST00000335221 ANP32BQ92688 251 aaKnown RBP11.63□□□□□ -0.55
BPTF-203ENST00000335221 CCDC9Q9Y3X0 531 aaKnown RBP11.63□□□□□ -0.55
BPTF-203ENST00000335221 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
BPTF-203ENST00000335221 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
BPTF-203ENST00000335221 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
BPTF-203ENST00000335221 PATL2C9JE40 543 aaKnown RBP11.6□□□□□ -0.55
BPTF-203ENST00000335221 NFKBIBQ15653 356 aa11.6□□□□□ -0.55
BPTF-203ENST00000335221 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
BPTF-203ENST00000335221 FAM193AP78312 1265 aa11.59□□□□□ -0.55
BPTF-203ENST00000335221 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
BPTF-203ENST00000335221 CLGNO14967 610 aa11.58□□□□□ -0.56
BPTF-203ENST00000335221 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
BPTF-203ENST00000335221 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
BPTF-203ENST00000335221 APPP05067 770 aa11.57□□□□□ -0.56
BPTF-203ENST00000335221 MAP7D2Q96T17 732 aa11.57□□□□□ -0.56
BPTF-203ENST00000335221 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
BPTF-203ENST00000335221 PTMAP06454 111 aaKnown RBP11.56□□□□□ -0.56
BPTF-203ENST00000335221 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
BPTF-203ENST00000335221 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
BPTF-203ENST00000335221 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
BPTF-203ENST00000335221 TICAM2Q86XR7 235 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms