RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 TRIM44Q96DX7 344 aaPredicted RBP21.84■■□□□ 1.09
PDZD8-201ENST00000334464 TNNT2P45379 298 aaPredicted RBP21.84■■□□□ 1.09
PDZD8-201ENST00000334464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.093e-6■□□□□ 10.9
PDZD8-201ENST00000334464 CLIP1P30622 1438 aa21.83■■□□□ 1.08
PDZD8-201ENST00000334464 CFAP53Q96M91 514 aa21.82■■□□□ 1.08
PDZD8-201ENST00000334464 CHMP4BQ9H444 224 aaKnown RBP21.8■■□□□ 1.08
PDZD8-201ENST00000334464 EIF4G2P78344 907 aaKnown RBP eCLIP21.79■■□□□ 1.08
PDZD8-201ENST00000334464 PPP1R15AO75807 674 aaPredicted RBP21.78■■□□□ 1.08
PDZD8-201ENST00000334464 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
PDZD8-201ENST00000334464 NBR1Q14596 966 aa21.74■■□□□ 1.07
PDZD8-201ENST00000334464 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
PDZD8-201ENST00000334464 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
PDZD8-201ENST00000334464 GOLGA6L6A8MZA4 724 aa21.7■■□□□ 1.06
PDZD8-201ENST00000334464 SALL2Q9Y467 1007 aaPredicted RBP21.69■■□□□ 1.06
PDZD8-201ENST00000334464 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
PDZD8-201ENST00000334464 CHIC2Q9UKJ5 165 aa21.68■■□□□ 1.06
PDZD8-201ENST00000334464 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
PDZD8-201ENST00000334464 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
PDZD8-201ENST00000334464 KNSTRNQ9Y448 316 aa21.66■■□□□ 1.06
PDZD8-201ENST00000334464 NACADO15069 1562 aa21.65■■□□□ 1.06
PDZD8-201ENST00000334464 C14orf37Q86TY3 774 aa21.65■■□□□ 1.06
PDZD8-201ENST00000334464 NRDCO43847 1150 aa21.65■■□□□ 1.06
PDZD8-201ENST00000334464 MS4A1P11836 297 aa21.64■■□□□ 1.06
PDZD8-201ENST00000334464 A0A0G2JS52 829 aa21.63■■□□□ 1.05
PDZD8-201ENST00000334464 PTMAP06454 111 aaKnown RBP21.63■■□□□ 1.05
PDZD8-201ENST00000334464 ARXQ96QS3 562 aa21.62■■□□□ 1.05
PDZD8-201ENST00000334464 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
PDZD8-201ENST00000334464 PLEKHD1A6NEE1 506 aa21.58■■□□□ 1.05
PDZD8-201ENST00000334464 ERICH6BQ5W0A0 696 aa21.58■■□□□ 1.05
PDZD8-201ENST00000334464 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
PDZD8-201ENST00000334464 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
PDZD8-201ENST00000334464 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
PDZD8-201ENST00000334464 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
PDZD8-201ENST00000334464 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
PDZD8-201ENST00000334464 MAPK8IP3Q9UPT6 1336 aa21.54■■□□□ 1.04
PDZD8-201ENST00000334464 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
PDZD8-201ENST00000334464 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
PDZD8-201ENST00000334464 DNTTIP2Q5QJE6 756 aaKnown RBP21.49■■□□□ 1.03
PDZD8-201ENST00000334464 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
PDZD8-201ENST00000334464 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
PDZD8-201ENST00000334464 L1TD1Q5T7N2 865 aaKnown RBP21.46■■□□□ 1.03
PDZD8-201ENST00000334464 KANK1Q14678 1352 aa21.45■■□□□ 1.02
PDZD8-201ENST00000334464 ZBTB7CA1YPR0 619 aa21.44■■□□□ 1.02
PDZD8-201ENST00000334464 CHAF1AQ13111 956 aaPredicted RBP21.44■■□□□ 1.02
PDZD8-201ENST00000334464 CFDP1Q9UEE9 299 aaPredicted RBP21.41■■□□□ 1.02
PDZD8-201ENST00000334464 RRP7BPQ9NSQ0 103 aa21.41■■□□□ 1.02
PDZD8-201ENST00000334464 FGD1P98174 961 aa21.4■■□□□ 1.02
PDZD8-201ENST00000334464 ARID4BQ4LE39 1312 aaPredicted RBP21.39■■□□□ 1.02
PDZD8-201ENST00000334464 NPHP1O15259 732 aa21.39■■□□□ 1.01
PDZD8-201ENST00000334464 GOLGA2Q08379 1002 aa21.37■■□□□ 1.01
PDZD8-201ENST00000334464 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
PDZD8-201ENST00000334464 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
PDZD8-201ENST00000334464 HDGFP51858 240 aaKnown RBP21.36■■□□□ 1.01
PDZD8-201ENST00000334464 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
PDZD8-201ENST00000334464 MCCP23508 829 aa21.35■■□□□ 1.01
PDZD8-201ENST00000334464 OS9Q13438 667 aaPredicted RBP21.35■■□□□ 1.01
PDZD8-201ENST00000334464 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
PDZD8-201ENST00000334464 POGKQ9P215 609 aa21.34■■□□□ 1.01
PDZD8-201ENST00000334464 KCNJ4P48050 445 aa21.33■■□□□ 1.01
PDZD8-201ENST00000334464 PTMSP20962 102 aa21.33■■□□□ 1
PDZD8-201ENST00000334464 MIER1Q8N108 512 aa21.32■■□□□ 1
PDZD8-201ENST00000334464 HSP90AB1P08238 724 aaKnown RBP21.32■■□□□ 1
PDZD8-201ENST00000334464 GOLGA6L4A6NEF3 574 aa21.31■■□□□ 1
PDZD8-201ENST00000334464 KCNH8Q96L42 1107 aa21.3■■□□□ 1
PDZD8-201ENST00000334464 CHMP4AQ9BY43 222 aa21.29■■□□□ 1
PDZD8-201ENST00000334464 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
PDZD8-201ENST00000334464 PPP4R2Q9NY27 417 aa21.29■■□□□ 1
PDZD8-201ENST00000334464 HSCBQ8IWL3 235 aa21.28■■□□□ 1
PDZD8-201ENST00000334464 CCNB3Q8WWL7 1395 aa21.26■□□□□ 0.99
PDZD8-201ENST00000334464 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
PDZD8-201ENST00000334464 RGL3Q3MIN7 710 aa21.25■□□□□ 0.99
PDZD8-201ENST00000334464 CALD1Q05682 793 aaKnown RBP21.22■□□□□ 0.99
PDZD8-201ENST00000334464 LAS1LQ9Y4W2 734 aaKnown RBP21.21■□□□□ 0.99
PDZD8-201ENST00000334464 TMF1P82094 1093 aa21.21■□□□□ 0.99
PDZD8-201ENST00000334464 NAP1L5Q96NT1 182 aaPredicted RBP21.21■□□□□ 0.99
PDZD8-201ENST00000334464 KIAA2012Q0VF49 1180 aa21.2■□□□□ 0.98
PDZD8-201ENST00000334464 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
PDZD8-201ENST00000334464 NOP58Q9Y2X3 529 aaKnown RBP21.19■□□□□ 0.98
PDZD8-201ENST00000334464 MSNP26038 577 aaKnown RBP21.16■□□□□ 0.98
PDZD8-201ENST00000334464 ARHGAP35Q9NRY4 1499 aa21.16■□□□□ 0.98
PDZD8-201ENST00000334464 EIF3AQ14152 1382 aaKnown RBP21.16■□□□□ 0.98
PDZD8-201ENST00000334464 EIF4G1Q04637 1599 aaKnown RBP21.15■□□□□ 0.98
PDZD8-201ENST00000334464 HTATSF1O43719 755 aaKnown RBP21.15■□□□□ 0.98
PDZD8-201ENST00000334464 IPO8O15397 1037 aaKnown RBP21.15■□□□□ 0.98
PDZD8-201ENST00000334464 CCDC34Q96HJ3 373 aa21.14■□□□□ 0.98
PDZD8-201ENST00000334464 FRAT1Q92837 279 aaPredicted RBP21.13■□□□□ 0.97
PDZD8-201ENST00000334464 PLEKHG5O94827 1062 aa21.13■□□□□ 0.97
PDZD8-201ENST00000334464 GNL2Q13823 731 aaKnown RBP21.13■□□□□ 0.97
PDZD8-201ENST00000334464 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
PDZD8-201ENST00000334464 RGS3P49796 1198 aa21.12■□□□□ 0.97
PDZD8-201ENST00000334464 KIAA1211Q6ZU35 1233 aa21.12■□□□□ 0.97
PDZD8-201ENST00000334464 NAP1L2Q9ULW6 460 aaPredicted RBP21.12■□□□□ 0.97
PDZD8-201ENST00000334464 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
PDZD8-201ENST00000334464 TULP1O00294 542 aaPredicted RBP21.11■□□□□ 0.97
PDZD8-201ENST00000334464 HDAC5Q9UQL6 1122 aa21.11■□□□□ 0.97
PDZD8-201ENST00000334464 PLCB2Q00722 1185 aa21.11■□□□□ 0.97
PDZD8-201ENST00000334464 LMOD2Q6P5Q4 547 aa21.11■□□□□ 0.97
PDZD8-201ENST00000334464 SYAP1Q96A49 352 aaPredicted RBP21.09■□□□□ 0.97
PDZD8-201ENST00000334464 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
PDZD8-201ENST00000334464 U2SURPO15042 1029 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms