RNA–Protein interactions for RNA: ENST00000334126.11

C2CD3-202, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C2CD3, Length 7,960 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-202ENST00000334126 MAP7D2Q96T17 732 aa12.21□□□□□ -0.45
C2CD3-202ENST00000334126 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
C2CD3-202ENST00000334126 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
C2CD3-202ENST00000334126 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
C2CD3-202ENST00000334126 ITGAEP38570 1179 aa12.19□□□□□ -0.46
C2CD3-202ENST00000334126 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
C2CD3-202ENST00000334126 DDX10Q13206 875 aaKnown RBP12.18□□□□□ -0.46
C2CD3-202ENST00000334126 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
C2CD3-202ENST00000334126 MSNP26038 577 aaKnown RBP12.14□□□□□ -0.47
C2CD3-202ENST00000334126 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
C2CD3-202ENST00000334126 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
C2CD3-202ENST00000334126 LAS1LQ9Y4W2 734 aaKnown RBP12.13□□□□□ -0.47
C2CD3-202ENST00000334126 CEP164Q9UPV0 1460 aa12.12□□□□□ -0.47
C2CD3-202ENST00000334126 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
C2CD3-202ENST00000334126 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
C2CD3-202ENST00000334126 ABCC9O60706 1549 aa12.11□□□□□ -0.47
C2CD3-202ENST00000334126 GSE1Q14687 1217 aa12.11□□□□□ -0.47
C2CD3-202ENST00000334126 FAM50AQ14320 339 aaKnown RBP12.11□□□□□ -0.47
C2CD3-202ENST00000334126 CLIP1P30622 1438 aa12.11□□□□□ -0.47
C2CD3-202ENST00000334126 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
C2CD3-202ENST00000334126 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
C2CD3-202ENST00000334126 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
C2CD3-202ENST00000334126 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
C2CD3-202ENST00000334126 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
C2CD3-202ENST00000334126 FAM43AQ8N2R8 423 aa12.07□□□□□ -0.48
C2CD3-202ENST00000334126 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
C2CD3-202ENST00000334126 TMC1Q8TDI8 760 aa12.06□□□□□ -0.48
C2CD3-202ENST00000334126 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
C2CD3-202ENST00000334126 TAF3Q5VWG9 929 aa12.05□□□□□ -0.48
C2CD3-202ENST00000334126 MS4A1P11836 297 aa12.05□□□□□ -0.48
C2CD3-202ENST00000334126 EIF4G2P78344 907 aaKnown RBP eCLIP12.04□□□□□ -0.48
C2CD3-202ENST00000334126 TPM2P07951 284 aa12.04□□□□□ -0.48
C2CD3-202ENST00000334126 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
C2CD3-202ENST00000334126 ISY1Q9ULR0 285 aaKnown RBP12.02□□□□□ -0.49
C2CD3-202ENST00000334126 GOLGA6L3A6NEY3 463 aa12.01□□□□□ -0.49
C2CD3-202ENST00000334126 DNTTIP2Q5QJE6 756 aaKnown RBP11.99□□□□□ -0.49
C2CD3-202ENST00000334126 GBP4Q96PP9 640 aa11.98□□□□□ -0.49
C2CD3-202ENST00000334126 PTMAP06454 111 aaKnown RBP11.97□□□□□ -0.49
C2CD3-202ENST00000334126 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
C2CD3-202ENST00000334126 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.49
C2CD3-202ENST00000334126 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.49
C2CD3-202ENST00000334126 VPS8Q8N3P4 1428 aa11.96□□□□□ -0.5
C2CD3-202ENST00000334126 DDX11L8A8MPP1 907 aa11.95□□□□□ -0.5
C2CD3-202ENST00000334126 SKOR2Q2VWA4 1001 aaPredicted RBP11.94□□□□□ -0.5
C2CD3-202ENST00000334126 CHMP4BQ9H444 224 aaKnown RBP11.94□□□□□ -0.5
C2CD3-202ENST00000334126 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
C2CD3-202ENST00000334126 PHLDB1Q86UU1 1377 aa11.94□□□□□ -0.5
C2CD3-202ENST00000334126 GOLGA6L6A8MZA4 724 aa11.93□□□□□ -0.5
C2CD3-202ENST00000334126 BAZ1BQ9UIG0 1483 aaKnown RBP11.93□□□□□ -0.5
C2CD3-202ENST00000334126 NRDCO43847 1150 aa11.92□□□□□ -0.5
C2CD3-202ENST00000334126 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
C2CD3-202ENST00000334126 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
C2CD3-202ENST00000334126 KIAA2012Q0VF49 1180 aa11.91□□□□□ -0.5
C2CD3-202ENST00000334126 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
C2CD3-202ENST00000334126 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
C2CD3-202ENST00000334126 CALRP27797 417 aaKnown RBP11.91□□□□□ -0.5
C2CD3-202ENST00000334126 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
C2CD3-202ENST00000334126 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
C2CD3-202ENST00000334126 CCNB3Q8WWL7 1395 aa11.9□□□□□ -0.5
C2CD3-202ENST00000334126 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.5
C2CD3-202ENST00000334126 PDE3BQ13370 1112 aa11.9□□□□□ -0.5
C2CD3-202ENST00000334126 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
C2CD3-202ENST00000334126 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
C2CD3-202ENST00000334126 TNNT3P45378 269 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-202ENST00000334126 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-202ENST00000334126 WDR43Q15061 677 aaKnown RBP eCLIP11.86□□□□□ -0.51
C2CD3-202ENST00000334126 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
C2CD3-202ENST00000334126 ROCK2O75116 1388 aaKnown RBP11.86□□□□□ -0.51
C2CD3-202ENST00000334126 SETD5Q9C0A6 1442 aa11.85□□□□□ -0.51
C2CD3-202ENST00000334126 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
C2CD3-202ENST00000334126 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
C2CD3-202ENST00000334126 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
C2CD3-202ENST00000334126 PHF14O94880 888 aa11.84□□□□□ -0.51
C2CD3-202ENST00000334126 SALL2Q9Y467 1007 aaPredicted RBP11.83□□□□□ -0.52
C2CD3-202ENST00000334126 TSPYL1Q9H0U9 437 aa11.82□□□□□ -0.52
C2CD3-202ENST00000334126 C11orf95C9JLR9 678 aaPredicted RBP11.82□□□□□ -0.52
C2CD3-202ENST00000334126 ARXQ96QS3 562 aa11.81□□□□□ -0.52
C2CD3-202ENST00000334126 GOLGA6L1Q8N7Z2 621 aa11.81□□□□□ -0.52
C2CD3-202ENST00000334126 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
C2CD3-202ENST00000334126 MAPK8IP3Q9UPT6 1336 aa11.81□□□□□ -0.52
C2CD3-202ENST00000334126 MRE11P49959 708 aa11.8□□□□□ -0.52
C2CD3-202ENST00000334126 PDCL3Q9H2J4 239 aa11.8□□□□□ -0.52
C2CD3-202ENST00000334126 AAMPQ13685 434 aa11.79□□□□□ -0.52
C2CD3-202ENST00000334126 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
C2CD3-202ENST00000334126 CENPQQ7L2Z9 268 aaPredicted RBP11.78□□□□□ -0.52
C2CD3-202ENST00000334126 HMGN5P82970 282 aaKnown RBP11.77□□□□□ -0.52
C2CD3-202ENST00000334126 FAM161AQ3B820 660 aa11.77□□□□□ -0.52
C2CD3-202ENST00000334126 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
C2CD3-202ENST00000334126 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
C2CD3-202ENST00000334126 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
C2CD3-202ENST00000334126 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
C2CD3-202ENST00000334126 PDE4AP27815 886 aa11.75□□□□□ -0.53
C2CD3-202ENST00000334126 RALBP1Q15311 655 aa11.75□□□□□ -0.53
C2CD3-202ENST00000334126 NOM1Q5C9Z4 860 aaKnown RBP11.75□□□□□ -0.53
C2CD3-202ENST00000334126 RCAN3Q9UKA8 241 aa11.74□□□□□ -0.53
C2CD3-202ENST00000334126 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
C2CD3-202ENST00000334126 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
C2CD3-202ENST00000334126 NACADO15069 1562 aa11.73□□□□□ -0.53
C2CD3-202ENST00000334126 KIF21BO75037 1637 aa11.72□□□□□ -0.53
C2CD3-202ENST00000334126 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms