RNA–Protein interactions for RNA: ENST00000334126.11

C2CD3-202, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C2CD3, Length 7,960 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-202ENST00000334126 MYT1Q01538 1121 aa16.09■□□□□ 0.17
C2CD3-202ENST00000334126 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
C2CD3-202ENST00000334126 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
C2CD3-202ENST00000334126 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
C2CD3-202ENST00000334126 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.03
C2CD3-202ENST00000334126 CENPBP07199 599 aaPredicted RBP14.7□□□□□ -0.06
C2CD3-202ENST00000334126 HRCP23327 699 aa14.44□□□□□ -0.1
C2CD3-202ENST00000334126 CCER1Q8TC90 406 aaPredicted RBP14.41□□□□□ -0.1
C2CD3-202ENST00000334126 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
C2CD3-202ENST00000334126 PCGF6Q9BYE7 350 aa14.2□□□□□ -0.14
C2CD3-202ENST00000334126 YTHDC1Q96MU7 727 aaKnown RBP14.09□□□□□ -0.15
C2CD3-202ENST00000334126 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
C2CD3-202ENST00000334126 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
C2CD3-202ENST00000334126 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
C2CD3-202ENST00000334126 TRIM26Q12899 539 aaPredicted RBP14□□□□□ -0.17
C2CD3-202ENST00000334126 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
C2CD3-202ENST00000334126 NEFLP07196 543 aa13.87□□□□□ -0.19
C2CD3-202ENST00000334126 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
C2CD3-202ENST00000334126 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
C2CD3-202ENST00000334126 APLP2Q06481 763 aa13.59□□□□□ -0.23
C2CD3-202ENST00000334126 CCDC180Q9P1Z9 1646 aa13.59□□□□□ -0.23
C2CD3-202ENST00000334126 DIEXFQ68CQ4 756 aaKnown RBP13.54□□□□□ -0.24
C2CD3-202ENST00000334126 GTF3C3Q9Y5Q9 886 aa13.53□□□□□ -0.24
C2CD3-202ENST00000334126 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.24
C2CD3-202ENST00000334126 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
C2CD3-202ENST00000334126 GLIPR1L2Q4G1C9 344 aa13.5□□□□□ -0.25
C2CD3-202ENST00000334126 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
C2CD3-202ENST00000334126 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.28
C2CD3-202ENST00000334126 DAXXQ9UER7 740 aaPredicted RBP13.31□□□□□ -0.28
C2CD3-202ENST00000334126 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
C2CD3-202ENST00000334126 FAM9AQ8IZU1 332 aaPredicted RBP13.3□□□□□ -0.28
C2CD3-202ENST00000334126 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
C2CD3-202ENST00000334126 ANP32EQ9BTT0 268 aa13.26□□□□□ -0.29
C2CD3-202ENST00000334126 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
C2CD3-202ENST00000334126 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
C2CD3-202ENST00000334126 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
C2CD3-202ENST00000334126 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
C2CD3-202ENST00000334126 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
C2CD3-202ENST00000334126 ANP32AP39687 249 aaKnown RBP13.05□□□□□ -0.32
C2CD3-202ENST00000334126 ERICH6BQ5W0A0 696 aa13.03□□□□□ -0.32
C2CD3-202ENST00000334126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.35
C2CD3-202ENST00000334126 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
C2CD3-202ENST00000334126 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
C2CD3-202ENST00000334126 ANP32CO43423 234 aa12.85□□□□□ -0.35
C2CD3-202ENST00000334126 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.35
C2CD3-202ENST00000334126 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
C2CD3-202ENST00000334126 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
C2CD3-202ENST00000334126 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
C2CD3-202ENST00000334126 ANP32BQ92688 251 aaKnown RBP12.73□□□□□ -0.37
C2CD3-202ENST00000334126 FKBP8Q14318 412 aa12.7□□□□□ -0.38
C2CD3-202ENST00000334126 TNNT2P45379 298 aaPredicted RBP12.7□□□□□ -0.38
C2CD3-202ENST00000334126 DDRGK1Q96HY6 314 aa12.7□□□□□ -0.38
C2CD3-202ENST00000334126 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
C2CD3-202ENST00000334126 BCANQ96GW7 911 aa12.64□□□□□ -0.39
C2CD3-202ENST00000334126 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
C2CD3-202ENST00000334126 TRIM44Q96DX7 344 aaPredicted RBP12.61□□□□□ -0.39
C2CD3-202ENST00000334126 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
C2CD3-202ENST00000334126 NOP58Q9Y2X3 529 aaKnown RBP12.58□□□□□ -0.4
C2CD3-202ENST00000334126 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
C2CD3-202ENST00000334126 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
C2CD3-202ENST00000334126 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
C2CD3-202ENST00000334126 ZCCHC6Q5VYS8 1495 aaKnown RBP12.56□□□□□ -0.4
C2CD3-202ENST00000334126 DEKP35659 375 aaKnown RBP12.56□□□□□ -0.4
C2CD3-202ENST00000334126 SLC24A1O60721 1099 aa12.55□□□□□ -0.4
C2CD3-202ENST00000334126 ARID4BQ4LE39 1312 aaPredicted RBP12.54□□□□□ -0.4
C2CD3-202ENST00000334126 MIER1Q8N108 512 aa12.53□□□□□ -0.4
C2CD3-202ENST00000334126 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.4
C2CD3-202ENST00000334126 PRKCSHP14314 528 aaPredicted RBP12.52□□□□□ -0.4
C2CD3-202ENST00000334126 EEA1Q15075 1411 aa12.51□□□□□ -0.41
C2CD3-202ENST00000334126 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
C2CD3-202ENST00000334126 NBR1Q14596 966 aa12.5□□□□□ -0.41
C2CD3-202ENST00000334126 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
C2CD3-202ENST00000334126 NEFMP07197 916 aa12.5□□□□□ -0.41
C2CD3-202ENST00000334126 RBM19Q9Y4C8 960 aaKnown RBP12.48□□□□□ -0.41
C2CD3-202ENST00000334126 L1TD1Q5T7N2 865 aaKnown RBP12.47□□□□□ -0.41
C2CD3-202ENST00000334126 PPP4R2Q9NY27 417 aa12.45□□□□□ -0.42
C2CD3-202ENST00000334126 BECN1Q14457 450 aa12.45□□□□□ -0.42
C2CD3-202ENST00000334126 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
C2CD3-202ENST00000334126 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
C2CD3-202ENST00000334126 CCDC136Q96JN2 1154 aa12.43□□□□□ -0.42
C2CD3-202ENST00000334126 ZNF326Q5BKZ1 582 aaKnown RBP12.41□□□□□ -0.42
C2CD3-202ENST00000334126 CCER2I3L3R5 266 aa12.4□□□□□ -0.42
C2CD3-202ENST00000334126 HSP90AA1P07900 732 aaKnown RBP12.39□□□□□ -0.43
C2CD3-202ENST00000334126 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
C2CD3-202ENST00000334126 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
C2CD3-202ENST00000334126 CDK11BP21127 795 aaKnown RBP12.35□□□□□ -0.43
C2CD3-202ENST00000334126 PTMSP20962 102 aa12.34□□□□□ -0.43
C2CD3-202ENST00000334126 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.34□□□□□ -0.43
C2CD3-202ENST00000334126 NAP1L5Q96NT1 182 aaPredicted RBP12.31□□□□□ -0.44
C2CD3-202ENST00000334126 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
C2CD3-202ENST00000334126 NPM2Q86SE8 214 aaKnown RBP12.29□□□□□ -0.44
C2CD3-202ENST00000334126 GOLGA6L22H0YM25 854 aa12.27□□□□□ -0.45
C2CD3-202ENST00000334126 UBE2Q2Q8WVN8 375 aa12.26□□□□□ -0.45
C2CD3-202ENST00000334126 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
C2CD3-202ENST00000334126 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-202ENST00000334126 PKNOX2Q96KN3 472 aa12.26□□□□□ -0.45
C2CD3-202ENST00000334126 IPO9Q96P70 1041 aaKnown RBP12.25□□□□□ -0.45
C2CD3-202ENST00000334126 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
C2CD3-202ENST00000334126 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
C2CD3-202ENST00000334126 MTERF4Q7Z6M4 381 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms