RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
SMTN-201ENST00000333137 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
SMTN-201ENST00000333137 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
SMTN-201ENST00000333137 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
SMTN-201ENST00000333137 BRPF3Q9ULD4 1205 aa18.59■□□□□ 0.57
SMTN-201ENST00000333137 IRX6P78412 446 aaPredicted RBP18.59■□□□□ 0.57
SMTN-201ENST00000333137 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
SMTN-201ENST00000333137 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
SMTN-201ENST00000333137 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
SMTN-201ENST00000333137 RBM10P98175 930 aaKnown RBP18.53■□□□□ 0.56
SMTN-201ENST00000333137 TRIM52Q96A61 297 aa18.53■□□□□ 0.56
SMTN-201ENST00000333137 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
SMTN-201ENST00000333137 NEFMP07197 916 aa18.48■□□□□ 0.55
SMTN-201ENST00000333137 FGD1P98174 961 aa18.48■□□□□ 0.55
SMTN-201ENST00000333137 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
SMTN-201ENST00000333137 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
SMTN-201ENST00000333137 WRNQ14191 1432 aaPredicted RBP eCLIP18.47■□□□□ 0.55
SMTN-201ENST00000333137 ANP32AP39687 249 aaKnown RBP18.43■□□□□ 0.54
SMTN-201ENST00000333137 AAMPQ13685 434 aa18.43■□□□□ 0.54
SMTN-201ENST00000333137 LAS1LQ9Y4W2 734 aaKnown RBP18.4■□□□□ 0.54
SMTN-201ENST00000333137 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.53
SMTN-201ENST00000333137 CFTRP13569 1480 aa18.39■□□□□ 0.53
SMTN-201ENST00000333137 SOGA1O94964 1423 aa18.38■□□□□ 0.53
SMTN-201ENST00000333137 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
SMTN-201ENST00000333137 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
SMTN-201ENST00000333137 C11orf95C9JLR9 678 aaPredicted RBP18.34■□□□□ 0.53
SMTN-201ENST00000333137 HSP90AA2PQ14568 343 aaPredicted RBP18.34■□□□□ 0.53
SMTN-201ENST00000333137 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.53
SMTN-201ENST00000333137 IPO9Q96P70 1041 aaKnown RBP18.31■□□□□ 0.52
SMTN-201ENST00000333137 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.51
SMTN-201ENST00000333137 SYNJ1O43426 1573 aa18.26■□□□□ 0.51
SMTN-201ENST00000333137 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
SMTN-201ENST00000333137 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
SMTN-201ENST00000333137 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
SMTN-201ENST00000333137 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
SMTN-201ENST00000333137 FBLN2P98095 1184 aa18.23■□□□□ 0.51
SMTN-201ENST00000333137 WASHC2CQ9Y4E1 1318 aa18.22■□□□□ 0.51
SMTN-201ENST00000333137 NAP1L5Q96NT1 182 aaPredicted RBP18.21■□□□□ 0.51
SMTN-201ENST00000333137 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
SMTN-201ENST00000333137 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
SMTN-201ENST00000333137 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
SMTN-201ENST00000333137 CUX1P39880 1505 aa18.19■□□□□ 0.5
SMTN-201ENST00000333137 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
SMTN-201ENST00000333137 HSP90AA1P07900 732 aaKnown RBP18.17■□□□□ 0.5
SMTN-201ENST00000333137 GSE1Q14687 1217 aa18.17■□□□□ 0.5
SMTN-201ENST00000333137 DDX10Q13206 875 aaKnown RBP18.16■□□□□ 0.5
SMTN-201ENST00000333137 FAM43AQ8N2R8 423 aa18.15■□□□□ 0.5
SMTN-201ENST00000333137 USP35Q9P2H5 1018 aa18.15■□□□□ 0.5
SMTN-201ENST00000333137 CUX2O14529 1486 aa18.13■□□□□ 0.49
SMTN-201ENST00000333137 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
SMTN-201ENST00000333137 RRP9O43818 475 aaKnown RBP18.11■□□□□ 0.49
SMTN-201ENST00000333137 EEA1Q15075 1411 aa18.11■□□□□ 0.49
SMTN-201ENST00000333137 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
SMTN-201ENST00000333137 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
SMTN-201ENST00000333137 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.49
SMTN-201ENST00000333137 P3H3Q8IVL6 736 aa18.08■□□□□ 0.48
SMTN-201ENST00000333137 FRAT1Q92837 279 aaPredicted RBP18.08■□□□□ 0.48
SMTN-201ENST00000333137 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
SMTN-201ENST00000333137 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
SMTN-201ENST00000333137 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMTN-201ENST00000333137 PAXIP1Q6ZW49 1069 aaPredicted RBP18.05■□□□□ 0.48
SMTN-201ENST00000333137 TAF7LQ5H9L4 462 aa18.05■□□□□ 0.48
SMTN-201ENST00000333137 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
SMTN-201ENST00000333137 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
SMTN-201ENST00000333137 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
SMTN-201ENST00000333137 RGS3P49796 1198 aa18.03■□□□□ 0.48
SMTN-201ENST00000333137 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.48
SMTN-201ENST00000333137 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
SMTN-201ENST00000333137 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.476e-8■■■■■ 47.6
SMTN-201ENST00000333137 ANP32CO43423 234 aa17.99■□□□□ 0.47
SMTN-201ENST00000333137 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
SMTN-201ENST00000333137 BBXQ8WY36 941 aaPredicted RBP17.99■□□□□ 0.47
SMTN-201ENST00000333137 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
SMTN-201ENST00000333137 HIRIP3Q9BW71 556 aaPredicted RBP17.97■□□□□ 0.47
SMTN-201ENST00000333137 GOLGA3Q08378 1498 aa17.97■□□□□ 0.47
SMTN-201ENST00000333137 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
SMTN-201ENST00000333137 PNNQ9H307 717 aaKnown RBP17.96■□□□□ 0.47
SMTN-201ENST00000333137 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
SMTN-201ENST00000333137 NAP1L2Q9ULW6 460 aaPredicted RBP17.95■□□□□ 0.46
SMTN-201ENST00000333137 RRAGDQ9NQL2 400 aaPredicted RBP17.93■□□□□ 0.46
SMTN-201ENST00000333137 ARID3CA6NKF2 412 aa17.92■□□□□ 0.46
SMTN-201ENST00000333137 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
SMTN-201ENST00000333137 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
SMTN-201ENST00000333137 RAPGEF2Q9Y4G8 1499 aa17.91■□□□□ 0.46
SMTN-201ENST00000333137 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
SMTN-201ENST00000333137 IGF1RP08069 1367 aa17.88■□□□□ 0.45
SMTN-201ENST00000333137 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
SMTN-201ENST00000333137 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
SMTN-201ENST00000333137 NFKBIBQ15653 356 aa17.87■□□□□ 0.45
SMTN-201ENST00000333137 ARXQ96QS3 562 aa17.87■□□□□ 0.45
SMTN-201ENST00000333137 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
SMTN-201ENST00000333137 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
SMTN-201ENST00000333137 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
SMTN-201ENST00000333137 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
SMTN-201ENST00000333137 PRDM4Q9UKN5 801 aa17.8■□□□□ 0.44
SMTN-201ENST00000333137 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
SMTN-201ENST00000333137 CLIP1P30622 1438 aa17.79■□□□□ 0.44
SMTN-201ENST00000333137 CALD1Q05682 793 aaKnown RBP17.78■□□□□ 0.44
SMTN-201ENST00000333137 KIF21BO75037 1637 aa17.78■□□□□ 0.44
SMTN-201ENST00000333137 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms