RNA–Protein interactions for RNA: ENST00000328895.8

GKN2-201, Transcript of gastrokine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN2, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN2-201ENST00000328895 GSE1Q14687 1217 aa15.88■□□□□ 0.13
GKN2-201ENST00000328895 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
GKN2-201ENST00000328895 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
GKN2-201ENST00000328895 PHF12Q96QT6 1004 aa15.85■□□□□ 0.13
GKN2-201ENST00000328895 SP7Q8TDD2 431 aaPredicted RBP15.81■□□□□ 0.12
GKN2-201ENST00000328895 PYGBP11216 843 aa15.77■□□□□ 0.12
GKN2-201ENST00000328895 KIF12Q96FN5 646 aa15.72■□□□□ 0.11
GKN2-201ENST00000328895 GABBR2O75899 941 aa15.7■□□□□ 0.1
GKN2-201ENST00000328895 MAP3K13O43283 966 aa15.69■□□□□ 0.1
GKN2-201ENST00000328895 PKD2Q13563 968 aa15.67■□□□□ 0.1
GKN2-201ENST00000328895 CLCN6P51797 869 aa15.66■□□□□ 0.1
GKN2-201ENST00000328895 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
GKN2-201ENST00000328895 PCDHB13Q9Y5F0 798 aa15.65■□□□□ 0.1
GKN2-201ENST00000328895 GALR2O43603 387 aaPredicted RBP15.64■□□□□ 0.09
GKN2-201ENST00000328895 ECM2O94769 699 aaPredicted RBP15.64■□□□□ 0.09
GKN2-201ENST00000328895 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
GKN2-201ENST00000328895 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
GKN2-201ENST00000328895 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
GKN2-201ENST00000328895 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
GKN2-201ENST00000328895 IFNL1Q8IU54 200 aa15.57■□□□□ 0.08
GKN2-201ENST00000328895 PCDHB8Q9UN66 801 aa15.57■□□□□ 0.08
GKN2-201ENST00000328895 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
GKN2-201ENST00000328895 ZNF467Q7Z7K2 595 aaPredicted RBP15.52■□□□□ 0.08
GKN2-201ENST00000328895 TRPC6Q9Y210 931 aa15.51■□□□□ 0.07
GKN2-201ENST00000328895 RNF25Q96BH1 459 aaPredicted RBP15.48■□□□□ 0.07
GKN2-201ENST00000328895 RGL2O15211 777 aa15.47■□□□□ 0.07
GKN2-201ENST00000328895 DCBLD2Q96PD2 775 aa15.47■□□□□ 0.07
GKN2-201ENST00000328895 RIOK3O14730 519 aaKnown RBP15.45■□□□□ 0.06
GKN2-201ENST00000328895 TIE1P35590 1138 aa15.39■□□□□ 0.05
GKN2-201ENST00000328895 BMP2KQ9NSY1 1161 aaPredicted RBP15.39■□□□□ 0.05
GKN2-201ENST00000328895 PSEN1P49768 467 aa15.38■□□□□ 0.05
GKN2-201ENST00000328895 PDAP1Q13442 181 aaKnown RBP15.38■□□□□ 0.05
GKN2-201ENST00000328895 TMEM106CQ9BVX2 250 aa15.38■□□□□ 0.05
GKN2-201ENST00000328895 POTEIP0CG38 1075 aa15.36■□□□□ 0.05
GKN2-201ENST00000328895 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
GKN2-201ENST00000328895 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
GKN2-201ENST00000328895 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
GKN2-201ENST00000328895 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
GKN2-201ENST00000328895 ASTLQ6HA08 431 aaPredicted RBP15.33■□□□□ 0.04
GKN2-201ENST00000328895 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
GKN2-201ENST00000328895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
GKN2-201ENST00000328895 ATN1P54259 1190 aaPredicted RBP15.31■□□□□ 0.04
GKN2-201ENST00000328895 ZFP91Q96JP5 570 aaPredicted RBP15.31■□□□□ 0.04
GKN2-201ENST00000328895 TRIM35Q9UPQ4 493 aa15.27■□□□□ 0.04
GKN2-201ENST00000328895 PELP1Q8IZL8 1130 aaKnown RBP15.26■□□□□ 0.03
GKN2-201ENST00000328895 STK25O00506 426 aa15.23■□□□□ 0.03
GKN2-201ENST00000328895 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
GKN2-201ENST00000328895 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
GKN2-201ENST00000328895 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
GKN2-201ENST00000328895 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
GKN2-201ENST00000328895 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
GKN2-201ENST00000328895 SLC39A7Q92504 469 aa15.15■□□□□ 0.02
GKN2-201ENST00000328895 MKRN3Q13064 507 aaKnown RBP15.14■□□□□ 0.01
GKN2-201ENST00000328895 METRNQ9UJH8 293 aa15.12■□□□□ 0.01
GKN2-201ENST00000328895 C7P10643 843 aa15.11■□□□□ 0.01
GKN2-201ENST00000328895 HS6ST3Q8IZP7 471 aa15.11■□□□□ 0.01
GKN2-201ENST00000328895 EFCAB3Q8N7B9 438 aa15.11■□□□□ 0.01
GKN2-201ENST00000328895 IER5LQ5T953 404 aa15.09■□□□□ 0.01
GKN2-201ENST00000328895 SEC24BO95487 1268 aa15.06■□□□□ 0
GKN2-201ENST00000328895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.03■□□□□ -0
GKN2-201ENST00000328895 COLQQ9Y215 455 aaPredicted RBP15.03■□□□□ -0
GKN2-201ENST00000328895 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
GKN2-201ENST00000328895 PLCG2P16885 1265 aa15.01□□□□□ -0.01
GKN2-201ENST00000328895 POTEFA5A3E0 1075 aa15□□□□□ -0.01
GKN2-201ENST00000328895 OCEL1Q9H607 264 aa14.99□□□□□ -0.01
GKN2-201ENST00000328895 SOX12O15370 315 aa14.98□□□□□ -0.01
GKN2-201ENST00000328895 PHF8Q9UPP1 1060 aa14.97□□□□□ -0.01
GKN2-201ENST00000328895 PDCD7Q8N8D1 485 aaKnown RBP14.93□□□□□ -0.02
GKN2-201ENST00000328895 MFRPQ9BY79 579 aa14.93□□□□□ -0.02
GKN2-201ENST00000328895 NKX1-1Q15270 411 aaPredicted RBP14.92□□□□□ -0.02
GKN2-201ENST00000328895 NLRP6P59044 892 aa14.91□□□□□ -0.02
GKN2-201ENST00000328895 DNAJC5Q9H3Z4 198 aa14.91□□□□□ -0.02
GKN2-201ENST00000328895 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
GKN2-201ENST00000328895 POTEB2H3BUK9 544 aa14.89□□□□□ -0.03
GKN2-201ENST00000328895 DPY19L2Q6NUT2 758 aa14.88□□□□□ -0.03
GKN2-201ENST00000328895 FBXO22Q8NEZ5 403 aa14.87□□□□□ -0.03
GKN2-201ENST00000328895 LHX8Q68G74 356 aa14.86□□□□□ -0.03
GKN2-201ENST00000328895 BBXQ8WY36 941 aaPredicted RBP14.86□□□□□ -0.03
GKN2-201ENST00000328895 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
GKN2-201ENST00000328895 POTEJP0CG39 1038 aa14.8□□□□□ -0.04
GKN2-201ENST00000328895 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.8□□□□□ -0.04
GKN2-201ENST00000328895 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
GKN2-201ENST00000328895 G3V3G9 751 aa14.77□□□□□ -0.05
GKN2-201ENST00000328895 RYDENQ9NUL5 291 aaKnown RBP14.77□□□□□ -0.05
GKN2-201ENST00000328895 GTPBP6O43824 516 aaPredicted RBP14.75□□□□□ -0.05
GKN2-201ENST00000328895 BOLA1Q9Y3E2 137 aa14.75□□□□□ -0.05
GKN2-201ENST00000328895 PPP1R37O75864 691 aa14.74□□□□□ -0.05
GKN2-201ENST00000328895 MAMSTRQ6ZN01 415 aa14.7□□□□□ -0.06
GKN2-201ENST00000328895 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
GKN2-201ENST00000328895 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
GKN2-201ENST00000328895 SCUBE2Q9NQ36 999 aa14.7□□□□□ -0.06
GKN2-201ENST00000328895 MICALL2Q8IY33 904 aa14.69□□□□□ -0.06
GKN2-201ENST00000328895 SPRYD3Q8NCJ5 442 aa14.69□□□□□ -0.06
GKN2-201ENST00000328895 C3orf67Q6ZVT6 689 aa14.68□□□□□ -0.06
GKN2-201ENST00000328895 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
GKN2-201ENST00000328895 TMEM121BQ9BXQ6 578 aaPredicted RBP14.65□□□□□ -0.06
GKN2-201ENST00000328895 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.65□□□□□ -0.06
GKN2-201ENST00000328895 SLAIN1Q8ND83 568 aa14.57□□□□□ -0.08
GKN2-201ENST00000328895 TMEM92Q6UXU6 159 aa14.5□□□□□ -0.09
GKN2-201ENST00000328895 PLCB2Q00722 1185 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1280.9 ms