RNA–Protein interactions for RNA: ENST00000325658.3

PPM1A-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best) BASIC

Gene PPM1A, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-202ENST00000325658 GOLGA3Q08378 1498 aa14.79□□□□□ -0.04
PPM1A-202ENST00000325658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
PPM1A-202ENST00000325658 FAM9BQ8IZU0 186 aa14.77□□□□□ -0.04
PPM1A-202ENST00000325658 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
PPM1A-202ENST00000325658 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.75□□□□□ -0.05
PPM1A-202ENST00000325658 TONSLQ96HA7 1378 aa14.74□□□□□ -0.05
PPM1A-202ENST00000325658 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
PPM1A-202ENST00000325658 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
PPM1A-202ENST00000325658 DEKP35659 375 aaKnown RBP14.72□□□□□ -0.05
PPM1A-202ENST00000325658 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
PPM1A-202ENST00000325658 NACADO15069 1562 aa14.72□□□□□ -0.05
PPM1A-202ENST00000325658 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.05
PPM1A-202ENST00000325658 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
PPM1A-202ENST00000325658 CCDC136Q96JN2 1154 aa14.71□□□□□ -0.05
PPM1A-202ENST00000325658 CHMP7Q8WUX9 453 aaPredicted RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
PPM1A-202ENST00000325658 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
PPM1A-202ENST00000325658 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
PPM1A-202ENST00000325658 B4GALNT3Q6L9W6 998 aa14.63□□□□□ -0.07
PPM1A-202ENST00000325658 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
PPM1A-202ENST00000325658 ARXQ96QS3 562 aa14.61□□□□□ -0.07
PPM1A-202ENST00000325658 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
PPM1A-202ENST00000325658 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
PPM1A-202ENST00000325658 EEA1Q15075 1411 aa14.59□□□□□ -0.07
PPM1A-202ENST00000325658 RAB3GAP2Q9H2M9 1393 aa14.58□□□□□ -0.08
PPM1A-202ENST00000325658 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
PPM1A-202ENST00000325658 FOXD1Q16676 465 aa14.57□□□□□ -0.08
PPM1A-202ENST00000325658 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
PPM1A-202ENST00000325658 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
PPM1A-202ENST00000325658 KIF21BO75037 1637 aa14.56□□□□□ -0.08
PPM1A-202ENST00000325658 MRS2Q9HD23 443 aa14.54□□□□□ -0.08
PPM1A-202ENST00000325658 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
PPM1A-202ENST00000325658 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
PPM1A-202ENST00000325658 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
PPM1A-202ENST00000325658 NEFMP07197 916 aa14.53□□□□□ -0.08
PPM1A-202ENST00000325658 TDRD9Q8NDG6 1382 aaKnown RBP14.53□□□□□ -0.08
PPM1A-202ENST00000325658 CUX2O14529 1486 aa14.52□□□□□ -0.08
PPM1A-202ENST00000325658 CCDC184Q52MB2 194 aa14.52□□□□□ -0.08
PPM1A-202ENST00000325658 CCNB3Q8WWL7 1395 aa14.51□□□□□ -0.09
PPM1A-202ENST00000325658 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
PPM1A-202ENST00000325658 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
PPM1A-202ENST00000325658 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
PPM1A-202ENST00000325658 SLC24A1O60721 1099 aa14.48□□□□□ -0.09
PPM1A-202ENST00000325658 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
PPM1A-202ENST00000325658 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
PPM1A-202ENST00000325658 IL27Q8NEV9 243 aa14.47□□□□□ -0.09
PPM1A-202ENST00000325658 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
PPM1A-202ENST00000325658 EIF4G2P78344 907 aaKnown RBP eCLIP14.45□□□□□ -0.1
PPM1A-202ENST00000325658 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
PPM1A-202ENST00000325658 PLEKHD1A6NEE1 506 aa14.44□□□□□ -0.1
PPM1A-202ENST00000325658 ERICH6BQ5W0A0 696 aa14.43□□□□□ -0.1
PPM1A-202ENST00000325658 CCER2I3L3R5 266 aa14.42□□□□□ -0.1
PPM1A-202ENST00000325658 NAP1L5Q96NT1 182 aaPredicted RBP14.42□□□□□ -0.1
PPM1A-202ENST00000325658 NOP58Q9Y2X3 529 aaKnown RBP14.42□□□□□ -0.1
PPM1A-202ENST00000325658 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
PPM1A-202ENST00000325658 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
PPM1A-202ENST00000325658 LAS1LQ9Y4W2 734 aaKnown RBP14.41□□□□□ -0.1
PPM1A-202ENST00000325658 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
PPM1A-202ENST00000325658 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
PPM1A-202ENST00000325658 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
PPM1A-202ENST00000325658 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
PPM1A-202ENST00000325658 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
PPM1A-202ENST00000325658 RRBP1Q9P2E9 1410 aaKnown RBP14.36□□□□□ -0.11
PPM1A-202ENST00000325658 SETD5Q9C0A6 1442 aa14.34□□□□□ -0.11
PPM1A-202ENST00000325658 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
PPM1A-202ENST00000325658 ANP32BQ92688 251 aaKnown RBP14.32□□□□□ -0.12
PPM1A-202ENST00000325658 ARID4BQ4LE39 1312 aaPredicted RBP14.32□□□□□ -0.12
PPM1A-202ENST00000325658 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
PPM1A-202ENST00000325658 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
PPM1A-202ENST00000325658 PHLDB1Q86UU1 1377 aa14.3□□□□□ -0.12
PPM1A-202ENST00000325658 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
PPM1A-202ENST00000325658 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
PPM1A-202ENST00000325658 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
PPM1A-202ENST00000325658 AMER1Q5JTC6 1135 aaPredicted RBP14.27□□□□□ -0.12
PPM1A-202ENST00000325658 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.12
PPM1A-202ENST00000325658 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
PPM1A-202ENST00000325658 C11orf95C9JLR9 678 aaPredicted RBP14.26□□□□□ -0.13
PPM1A-202ENST00000325658 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
PPM1A-202ENST00000325658 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
PPM1A-202ENST00000325658 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
PPM1A-202ENST00000325658 ESF1Q9H501 851 aaKnown RBP14.25□□□□□ -0.13
PPM1A-202ENST00000325658 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
PPM1A-202ENST00000325658 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
PPM1A-202ENST00000325658 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
PPM1A-202ENST00000325658 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
PPM1A-202ENST00000325658 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
PPM1A-202ENST00000325658 PKD2Q13563 968 aa14.22□□□□□ -0.13
PPM1A-202ENST00000325658 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
PPM1A-202ENST00000325658 ARHGAP35Q9NRY4 1499 aa14.21□□□□□ -0.13
PPM1A-202ENST00000325658 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.13
PPM1A-202ENST00000325658 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.14
PPM1A-202ENST00000325658 WDR43Q15061 677 aaKnown RBP eCLIP14.2□□□□□ -0.14
PPM1A-202ENST00000325658 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
PPM1A-202ENST00000325658 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
PPM1A-202ENST00000325658 SAFB2Q14151 953 aaKnown RBP eCLIP14.19□□□□□ -0.14
PPM1A-202ENST00000325658 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
PPM1A-202ENST00000325658 L3MBTL2Q969R5 705 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms