RNA–Protein interactions for RNA: ENST00000320954.10

CRTAP-201, Transcript of cartilage associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CRTAP, Length 6,630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-201ENST00000320954 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
CRTAP-201ENST00000320954 ANP32AP39687 249 aaKnown RBP15.7■□□□□ 0.1
CRTAP-201ENST00000320954 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
CRTAP-201ENST00000320954 EIF5BO60841 1220 aaKnown RBP15.69■□□□□ 0.1
CRTAP-201ENST00000320954 DDX10Q13206 875 aaKnown RBP15.69■□□□□ 0.1
CRTAP-201ENST00000320954 SOX12O15370 315 aa15.69■□□□□ 0.1
CRTAP-201ENST00000320954 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
CRTAP-201ENST00000320954 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
CRTAP-201ENST00000320954 RRP7BPQ9NSQ0 103 aa15.67■□□□□ 0.1
CRTAP-201ENST00000320954 LAS1LQ9Y4W2 734 aaKnown RBP15.66■□□□□ 0.1
CRTAP-201ENST00000320954 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
CRTAP-201ENST00000320954 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
CRTAP-201ENST00000320954 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
CRTAP-201ENST00000320954 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
CRTAP-201ENST00000320954 FKBP8Q14318 412 aa15.6■□□□□ 0.09
CRTAP-201ENST00000320954 CLSTN1O94985 981 aa15.59■□□□□ 0.09
CRTAP-201ENST00000320954 ISY1Q9ULR0 285 aaKnown RBP15.58■□□□□ 0.09
CRTAP-201ENST00000320954 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.58■□□□□ 0.08
CRTAP-201ENST00000320954 CCDC9Q9Y3X0 531 aaKnown RBP15.57■□□□□ 0.08
CRTAP-201ENST00000320954 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
CRTAP-201ENST00000320954 AMER1Q5JTC6 1135 aaPredicted RBP15.56■□□□□ 0.08
CRTAP-201ENST00000320954 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.56■□□□□ 0.08
CRTAP-201ENST00000320954 NEUROD2Q15784 382 aa15.55■□□□□ 0.08
CRTAP-201ENST00000320954 GOLGA2Q08379 1002 aa15.52■□□□□ 0.07
CRTAP-201ENST00000320954 POGKQ9P215 609 aa15.52■□□□□ 0.07
CRTAP-201ENST00000320954 SAFB2Q14151 953 aaKnown RBP eCLIP15.5■□□□□ 0.07
CRTAP-201ENST00000320954 AEBP2Q6ZN18 517 aaPredicted RBP15.5■□□□□ 0.07
CRTAP-201ENST00000320954 PLEKHD1A6NEE1 506 aa15.5■□□□□ 0.07
CRTAP-201ENST00000320954 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
CRTAP-201ENST00000320954 NAP1L2Q9ULW6 460 aaPredicted RBP15.49■□□□□ 0.07
CRTAP-201ENST00000320954 NBR1Q14596 966 aa15.49■□□□□ 0.07
CRTAP-201ENST00000320954 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
CRTAP-201ENST00000320954 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
CRTAP-201ENST00000320954 OS9Q13438 667 aaPredicted RBP15.43■□□□□ 0.06
CRTAP-201ENST00000320954 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
CRTAP-201ENST00000320954 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
CRTAP-201ENST00000320954 PRKCSHP14314 528 aaPredicted RBP15.4■□□□□ 0.06
CRTAP-201ENST00000320954 STK26Q9P289 416 aa15.37■□□□□ 0.05
CRTAP-201ENST00000320954 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
CRTAP-201ENST00000320954 CFDP1Q9UEE9 299 aaPredicted RBP15.37■□□□□ 0.05
CRTAP-201ENST00000320954 ZRSR1Q15695 479 aaKnown RBP15.36■□□□□ 0.05
CRTAP-201ENST00000320954 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
CRTAP-201ENST00000320954 CFAP53Q96M91 514 aa15.34■□□□□ 0.05
CRTAP-201ENST00000320954 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
CRTAP-201ENST00000320954 FGD1P98174 961 aa15.33■□□□□ 0.05
CRTAP-201ENST00000320954 EIF4G1Q04637 1599 aaKnown RBP15.33■□□□□ 0.04
CRTAP-201ENST00000320954 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
CRTAP-201ENST00000320954 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
CRTAP-201ENST00000320954 GGT6Q6P531 493 aa15.32■□□□□ 0.04
CRTAP-201ENST00000320954 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
CRTAP-201ENST00000320954 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
CRTAP-201ENST00000320954 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
CRTAP-201ENST00000320954 PRM3Q9NNZ6 103 aa15.3■□□□□ 0.04
CRTAP-201ENST00000320954 KNSTRNQ9Y448 316 aa15.29■□□□□ 0.04
CRTAP-201ENST00000320954 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
CRTAP-201ENST00000320954 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
CRTAP-201ENST00000320954 KCNJ4P48050 445 aa15.28■□□□□ 0.04
CRTAP-201ENST00000320954 PLCB2Q00722 1185 aa15.28■□□□□ 0.04
CRTAP-201ENST00000320954 SRPK2P78362 688 aaKnown RBP15.27■□□□□ 0.04
CRTAP-201ENST00000320954 MSH5O43196 834 aa15.27■□□□□ 0.04
CRTAP-201ENST00000320954 NUTM2DQ5VT03 806 aaPredicted RBP15.26■□□□□ 0.03
CRTAP-201ENST00000320954 TMX4Q9H1E5 349 aaPredicted RBP15.26■□□□□ 0.03
CRTAP-201ENST00000320954 G3V3G9 751 aa15.25■□□□□ 0.03
CRTAP-201ENST00000320954 DCAF8Q5TAQ9 597 aa15.25■□□□□ 0.03
CRTAP-201ENST00000320954 CARD11Q9BXL7 1154 aa15.25■□□□□ 0.03
CRTAP-201ENST00000320954 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
CRTAP-201ENST00000320954 NUTM2FA1L443 756 aa15.23■□□□□ 0.03
CRTAP-201ENST00000320954 EIF4G2P78344 907 aaKnown RBP eCLIP15.23■□□□□ 0.03
CRTAP-201ENST00000320954 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
CRTAP-201ENST00000320954 PDE4CQ08493 712 aa15.22■□□□□ 0.03
CRTAP-201ENST00000320954 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
CRTAP-201ENST00000320954 APBB1O00213 710 aa15.21■□□□□ 0.02
CRTAP-201ENST00000320954 CLIP1P30622 1438 aa15.2■□□□□ 0.02
CRTAP-201ENST00000320954 PTMAP06454 111 aaKnown RBP15.18■□□□□ 0.02
CRTAP-201ENST00000320954 NUDCQ9Y266 331 aa15.18■□□□□ 0.02
CRTAP-201ENST00000320954 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
CRTAP-201ENST00000320954 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
CRTAP-201ENST00000320954 CHMP3Q9Y3E7 222 aa15.16■□□□□ 0.02
CRTAP-201ENST00000320954 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
CRTAP-201ENST00000320954 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
CRTAP-201ENST00000320954 RGS3P49796 1198 aa15.13■□□□□ 0.01
CRTAP-201ENST00000320954 HDGFP51858 240 aaKnown RBP15.13■□□□□ 0.01
CRTAP-201ENST00000320954 DNTTIP2Q5QJE6 756 aaKnown RBP15.13■□□□□ 0.01
CRTAP-201ENST00000320954 RTF1Q92541 710 aaKnown RBP15.12■□□□□ 0.01
CRTAP-201ENST00000320954 DCAF11Q8TEB1 546 aa15.12■□□□□ 0.01
CRTAP-201ENST00000320954 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
CRTAP-201ENST00000320954 PODXL2Q9NZ53 605 aa15.11■□□□□ 0.01
CRTAP-201ENST00000320954 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
CRTAP-201ENST00000320954 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
CRTAP-201ENST00000320954 GOLGA6L22H0YM25 854 aa15.08■□□□□ 0.01
CRTAP-201ENST00000320954 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0.01
CRTAP-201ENST00000320954 KRI1Q8N9T8 703 aaKnown RBP15.08■□□□□ 0
CRTAP-201ENST00000320954 GNL2Q13823 731 aaKnown RBP15.08■□□□□ 0
CRTAP-201ENST00000320954 BECN1Q14457 450 aa15.08■□□□□ 0
CRTAP-201ENST00000320954 A0A0U1RQG5 324 aaPredicted RBP15.07■□□□□ 0
CRTAP-201ENST00000320954 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
CRTAP-201ENST00000320954 SPRYD3Q8NCJ5 442 aa15.07■□□□□ 0
CRTAP-201ENST00000320954 ERICH6BQ5W0A0 696 aa15.07■□□□□ 0
CRTAP-201ENST00000320954 MIER1Q8N108 512 aa15.07■□□□□ 0
CRTAP-201ENST00000320954 FOXD1Q16676 465 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms