RNA–Protein interactions for RNA: ENST00000317221.11

ZNF559-201, Transcript of zinc finger protein 559, humanhuman

TSL 2 BASIC

Gene ZNF559, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-201ENST00000317221 PRDM2Q13029 1718 aa8.09□□□□□ -1.11
ZNF559-201ENST00000317221 DEKP35659 375 aaKnown RBP8.09□□□□□ -1.11
ZNF559-201ENST00000317221 DDX10Q13206 875 aaKnown RBP8.09□□□□□ -1.11
ZNF559-201ENST00000317221 TRIM52Q96A61 297 aa8.09□□□□□ -1.11
ZNF559-201ENST00000317221 EEA1Q15075 1411 aa8.09□□□□□ -1.11
ZNF559-201ENST00000317221 TDRD9Q8NDG6 1382 aaKnown RBP8.08□□□□□ -1.12
ZNF559-201ENST00000317221 GOLGA3Q08378 1498 aa8.08□□□□□ -1.12
ZNF559-201ENST00000317221 CDK11AQ9UQ88 783 aaPredicted RBP8.08□□□□□ -1.12
ZNF559-201ENST00000317221 POLA1P09884 1462 aaPredicted RBP8.08□□□□□ -1.12
ZNF559-201ENST00000317221 BIVM-ERCC5R4GMW8 1640 aa8.08□□□□□ -1.12
ZNF559-201ENST00000317221 CUX2O14529 1486 aa8.07□□□□□ -1.12
ZNF559-201ENST00000317221 ANO8Q9HCE9 1232 aaPredicted RBP8.07□□□□□ -1.12
ZNF559-201ENST00000317221 CLIP1P30622 1438 aa8.06□□□□□ -1.12
ZNF559-201ENST00000317221 DNMBPQ6XZF7 1577 aa8.05□□□□□ -1.12
ZNF559-201ENST00000317221 VPS8Q8N3P4 1428 aa8.04□□□□□ -1.12
ZNF559-201ENST00000317221 RAPGEF2Q9Y4G8 1499 aa8.03□□□□□ -1.12
ZNF559-201ENST00000317221 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.12
ZNF559-201ENST00000317221 AQRO60306 1485 aaKnown RBP eCLIP8.02□□□□□ -1.13
ZNF559-201ENST00000317221 CCER2I3L3R5 266 aa8.01□□□□□ -1.13
ZNF559-201ENST00000317221 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
ZNF559-201ENST00000317221 KIF27Q86VH2 1401 aa8.01□□□□□ -1.13
ZNF559-201ENST00000317221 ZNF608Q9ULD9 1512 aaPredicted RBP8.01□□□□□ -1.13
ZNF559-201ENST00000317221 IGF1RP08069 1367 aa8.01□□□□□ -1.13
ZNF559-201ENST00000317221 ANP32CO43423 234 aa8□□□□□ -1.13
ZNF559-201ENST00000317221 IRX6P78412 446 aaPredicted RBP8□□□□□ -1.13
ZNF559-201ENST00000317221 KANK4Q5T7N3 995 aaPredicted RBP7.98□□□□□ -1.13
ZNF559-201ENST00000317221 HIRIP3Q9BW71 556 aaPredicted RBP7.98□□□□□ -1.13
ZNF559-201ENST00000317221 NBR1Q14596 966 aa7.98□□□□□ -1.13
ZNF559-201ENST00000317221 SALL2Q9Y467 1007 aaPredicted RBP7.97□□□□□ -1.13
ZNF559-201ENST00000317221 THOC2Q8NI27 1593 aaKnown RBP7.97□□□□□ -1.13
ZNF559-201ENST00000317221 ABCA10Q8WWZ4 1543 aa7.96□□□□□ -1.14
ZNF559-201ENST00000317221 CARMIL1Q5VZK9 1371 aa7.96□□□□□ -1.14
ZNF559-201ENST00000317221 FBLN2P98095 1184 aa7.95□□□□□ -1.14
ZNF559-201ENST00000317221 ERICH6BQ5W0A0 696 aa7.95□□□□□ -1.14
ZNF559-201ENST00000317221 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
ZNF559-201ENST00000317221 WDR62O43379 1518 aa7.95□□□□□ -1.14
ZNF559-201ENST00000317221 TARBP1Q13395 1621 aaKnown RBP7.95□□□□□ -1.14
ZNF559-201ENST00000317221 SIN3AQ96ST3 1273 aa7.95□□□□□ -1.14
ZNF559-201ENST00000317221 PRXQ9BXM0 1461 aa7.95□□□□□ -1.14
ZNF559-201ENST00000317221 PPP4R2Q9NY27 417 aa7.94□□□□□ -1.14
ZNF559-201ENST00000317221 NOP58Q9Y2X3 529 aaKnown RBP7.94□□□□□ -1.14
ZNF559-201ENST00000317221 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
ZNF559-201ENST00000317221 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
ZNF559-201ENST00000317221 KIF21BO75037 1637 aa7.94□□□□□ -1.14
ZNF559-201ENST00000317221 PAK3O75914 559 aaPredicted RBP7.94□□□□□ -1.14
ZNF559-201ENST00000317221 CCDC136Q96JN2 1154 aa7.92□□□□□ -1.14
ZNF559-201ENST00000317221 RRBP1Q9P2E9 1410 aaKnown RBP7.91□□□□□ -1.14
ZNF559-201ENST00000317221 WDR97A6NE52 1622 aa7.91□□□□□ -1.14
ZNF559-201ENST00000317221 RAB3GAP2Q9H2M9 1393 aa7.9□□□□□ -1.14
ZNF559-201ENST00000317221 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
ZNF559-201ENST00000317221 CCNB3Q8WWL7 1395 aa7.9□□□□□ -1.14
ZNF559-201ENST00000317221 AEBP2Q6ZN18 517 aaPredicted RBP7.9□□□□□ -1.15
ZNF559-201ENST00000317221 IFT140Q96RY7 1462 aa7.89□□□□□ -1.15
ZNF559-201ENST00000317221 IL27Q8NEV9 243 aa7.89□□□□□ -1.15
ZNF559-201ENST00000317221 TIMELESSQ9UNS1 1208 aa7.89□□□□□ -1.15
ZNF559-201ENST00000317221 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
ZNF559-201ENST00000317221 RTL5Q5HYW3 569 aaPredicted RBP7.88□□□□□ -1.15
ZNF559-201ENST00000317221 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
ZNF559-201ENST00000317221 MAPKBP1O60336 1514 aa7.88□□□□□ -1.15
ZNF559-201ENST00000317221 EIF4G3O43432 1585 aaKnown RBP7.87□□□□□ -1.15
ZNF559-201ENST00000317221 SNAPC4Q5SXM2 1469 aa7.87□□□□□ -1.15
ZNF559-201ENST00000317221 CHMP7Q8WUX9 453 aaPredicted RBP7.86□□□□□ -1.15
ZNF559-201ENST00000317221 IPO9Q96P70 1041 aaKnown RBP7.86□□□□□ -1.15
ZNF559-201ENST00000317221 ZBTB47Q9UFB7 747 aaPredicted RBP7.86□□□□□ -1.15
ZNF559-201ENST00000317221 ATP1B4Q9UN42 357 aaPredicted RBP7.86□□□□□ -1.15
ZNF559-201ENST00000317221 UBE2Q2Q8WVN8 375 aa7.85□□□□□ -1.15
ZNF559-201ENST00000317221 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.85□□□□□ -1.15
ZNF559-201ENST00000317221 GRIN2BQ13224 1484 aa7.85□□□□□ -1.15
ZNF559-201ENST00000317221 SETD5Q9C0A6 1442 aa7.85□□□□□ -1.15
ZNF559-201ENST00000317221 ARID3CA6NKF2 412 aa7.85□□□□□ -1.15
ZNF559-201ENST00000317221 ERICH3Q5RHP9 1530 aa7.84□□□□□ -1.15
ZNF559-201ENST00000317221 PBRM1Q86U86 1689 aa7.84□□□□□ -1.15
ZNF559-201ENST00000317221 ANP32AP39687 249 aaKnown RBP7.84□□□□□ -1.15
ZNF559-201ENST00000317221 ARAP1Q96P48 1450 aa7.83□□□□□ -1.16
ZNF559-201ENST00000317221 ARHGAP35Q9NRY4 1499 aa7.82□□□□□ -1.16
ZNF559-201ENST00000317221 FHAD1B1AJZ9 1412 aa7.82□□□□□ -1.16
ZNF559-201ENST00000317221 FHOD3Q2V2M9 1422 aa7.82□□□□□ -1.16
ZNF559-201ENST00000317221 ADAMTS12P58397 1594 aa7.81□□□□□ -1.16
ZNF559-201ENST00000317221 FAM50AQ14320 339 aaKnown RBP7.8□□□□□ -1.16
ZNF559-201ENST00000317221 CUL7Q14999 1698 aa7.8□□□□□ -1.16
ZNF559-201ENST00000317221 CCDC184Q52MB2 194 aa7.8□□□□□ -1.16
ZNF559-201ENST00000317221 FAM9BQ8IZU0 186 aa7.8□□□□□ -1.16
ZNF559-201ENST00000317221 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
ZNF559-201ENST00000317221 WASHC2AQ641Q2 1341 aa7.79□□□□□ -1.16
ZNF559-201ENST00000317221 GRIN2AQ12879 1464 aa7.78□□□□□ -1.16
ZNF559-201ENST00000317221 NEFMP07197 916 aa7.77□□□□□ -1.17
ZNF559-201ENST00000317221 EIF5BO60841 1220 aaKnown RBP7.77□□□□□ -1.17
ZNF559-201ENST00000317221 USP35Q9P2H5 1018 aa7.77□□□□□ -1.17
ZNF559-201ENST00000317221 TONSLQ96HA7 1378 aa7.77□□□□□ -1.17
ZNF559-201ENST00000317221 SYNJ2O15056 1496 aa7.76□□□□□ -1.17
ZNF559-201ENST00000317221 C11orf95C9JLR9 678 aaPredicted RBP7.76□□□□□ -1.17
ZNF559-201ENST00000317221 CEP170Q5SW79 1584 aa7.76□□□□□ -1.17
ZNF559-201ENST00000317221 ZBED9Q6R2W3 1325 aa7.75□□□□□ -1.17
ZNF559-201ENST00000317221 MAGI1Q96QZ7 1491 aaPredicted RBP7.75□□□□□ -1.17
ZNF559-201ENST00000317221 JPH4Q96JJ6 628 aa7.75□□□□□ -1.17
ZNF559-201ENST00000317221 WASHC2CQ9Y4E1 1318 aa7.74□□□□□ -1.17
ZNF559-201ENST00000317221 MRS2Q9HD23 443 aa7.74□□□□□ -1.17
ZNF559-201ENST00000317221 LAS1LQ9Y4W2 734 aaKnown RBP7.74□□□□□ -1.17
ZNF559-201ENST00000317221 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
ZNF559-201ENST00000317221 CTTNBP2Q8WZ74 1663 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms