RNA–Protein interactions for RNA: ENST00000313005.10

BACE1-201, Transcript of beta-secretase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BACE1, Length 6,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-201ENST00000313005 TAOK2Q9UL54 1235 aa22.43■■□□□ 1.18
BACE1-201ENST00000313005 KCNH8Q96L42 1107 aa22.4■■□□□ 1.18
BACE1-201ENST00000313005 ARID4BQ4LE39 1312 aaPredicted RBP22.39■■□□□ 1.17
BACE1-201ENST00000313005 MRS2Q9HD23 443 aa22.39■■□□□ 1.17
BACE1-201ENST00000313005 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
BACE1-201ENST00000313005 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
BACE1-201ENST00000313005 PPM1GO15355 546 aaPredicted RBP22.35■■□□□ 1.17
BACE1-201ENST00000313005 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
BACE1-201ENST00000313005 LMOD2Q6P5Q4 547 aa22.28■■□□□ 1.16
BACE1-201ENST00000313005 NCLP19338 710 aaKnown RBP22.28■■□□□ 1.16
BACE1-201ENST00000313005 NPHP1O15259 732 aa22.27■■□□□ 1.16
BACE1-201ENST00000313005 RGL3Q3MIN7 710 aa22.26■■□□□ 1.15
BACE1-201ENST00000313005 RRP7BPQ9NSQ0 103 aa22.26■■□□□ 1.15
BACE1-201ENST00000313005 LAS1LQ9Y4W2 734 aaKnown RBP22.25■■□□□ 1.15
BACE1-201ENST00000313005 GLIPR1L2Q4G1C9 344 aa22.23■■□□□ 1.15
BACE1-201ENST00000313005 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
BACE1-201ENST00000313005 NCBP3Q53F19 620 aaKnown RBP22.19■■□□□ 1.14
BACE1-201ENST00000313005 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
BACE1-201ENST00000313005 NEUROD2Q15784 382 aa22.14■■□□□ 1.14
BACE1-201ENST00000313005 ZRSR1Q15695 479 aaKnown RBP22.14■■□□□ 1.13
BACE1-201ENST00000313005 TRIM44Q96DX7 344 aaPredicted RBP22.1■■□□□ 1.13
BACE1-201ENST00000313005 PTMAP06454 111 aaKnown RBP22.08■■□□□ 1.13
BACE1-201ENST00000313005 TNNT2P45379 298 aaPredicted RBP22.08■■□□□ 1.13
BACE1-201ENST00000313005 BECN1Q14457 450 aa22.08■■□□□ 1.13
BACE1-201ENST00000313005 FTSJ3Q8IY81 847 aaKnown RBP22.06■■□□□ 1.12
BACE1-201ENST00000313005 CASC1Q6TDU7 716 aa22.05■■□□□ 1.12
BACE1-201ENST00000313005 NAP1L2Q9ULW6 460 aaPredicted RBP22.04■■□□□ 1.12
BACE1-201ENST00000313005 EIF4G2P78344 907 aaKnown RBP eCLIP22.04■■□□□ 1.12
BACE1-201ENST00000313005 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
BACE1-201ENST00000313005 GOLGA6L22H0YM25 854 aa22.02■■□□□ 1.12
BACE1-201ENST00000313005 DNTTIP2Q5QJE6 756 aaKnown RBP22.01■■□□□ 1.11
BACE1-201ENST00000313005 PLCB2Q00722 1185 aa22■■□□□ 1.11
BACE1-201ENST00000313005 MIER1Q8N108 512 aa22■■□□□ 1.11
BACE1-201ENST00000313005 CLSTN1O94985 981 aa22■■□□□ 1.11
BACE1-201ENST00000313005 OS9Q13438 667 aaPredicted RBP21.99■■□□□ 1.11
BACE1-201ENST00000313005 SOX12O15370 315 aa21.99■■□□□ 1.11
BACE1-201ENST00000313005 DDRGK1Q96HY6 314 aa21.98■■□□□ 1.11
BACE1-201ENST00000313005 KNSTRNQ9Y448 316 aa21.98■■□□□ 1.11
BACE1-201ENST00000313005 POGKQ9P215 609 aa21.97■■□□□ 1.11
BACE1-201ENST00000313005 GOLGA2Q08379 1002 aa21.95■■□□□ 1.1
BACE1-201ENST00000313005 MAPK8IP3Q9UPT6 1336 aa21.95■■□□□ 1.1
BACE1-201ENST00000313005 PLEKHD1A6NEE1 506 aa21.95■■□□□ 1.1
BACE1-201ENST00000313005 FRAT1Q92837 279 aaPredicted RBP21.94■■□□□ 1.1
BACE1-201ENST00000313005 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
BACE1-201ENST00000313005 FGD1P98174 961 aa21.92■■□□□ 1.1
BACE1-201ENST00000313005 ISY1Q9ULR0 285 aaKnown RBP21.91■■□□□ 1.1
BACE1-201ENST00000313005 MLECQ14165 292 aa21.9■■□□□ 1.1
BACE1-201ENST00000313005 CC2D1BQ5T0F9 858 aaKnown RBP21.89■■□□□ 1.1
BACE1-201ENST00000313005 U2SURPO15042 1029 aaKnown RBP21.89■■□□□ 1.09
BACE1-201ENST00000313005 RGS3P49796 1198 aa21.88■■□□□ 1.09
BACE1-201ENST00000313005 CARD11Q9BXL7 1154 aa21.87■■□□□ 1.09
BACE1-201ENST00000313005 KCNJ4P48050 445 aa21.86■■□□□ 1.09
BACE1-201ENST00000313005 SUPT16HQ9Y5B9 1047 aaKnown RBP21.81■■□□□ 1.08
BACE1-201ENST00000313005 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
BACE1-201ENST00000313005 NUDCQ9Y266 331 aa21.79■■□□□ 1.08
BACE1-201ENST00000313005 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
BACE1-201ENST00000313005 SAFB2Q14151 953 aaKnown RBP eCLIP21.78■■□□□ 1.08
BACE1-201ENST00000313005 CDCA8Q53HL2 280 aa21.78■■□□□ 1.08
BACE1-201ENST00000313005 RTN4Q9NQC3 1192 aaKnown RBP21.77■■□□□ 1.08
BACE1-201ENST00000313005 AMER1Q5JTC6 1135 aaPredicted RBP21.76■■□□□ 1.07
BACE1-201ENST00000313005 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
BACE1-201ENST00000313005 NAP1L5Q96NT1 182 aaPredicted RBP21.74■■□□□ 1.07
BACE1-201ENST00000313005 SPRYD3Q8NCJ5 442 aa21.74■■□□□ 1.07
BACE1-201ENST00000313005 CLIP1P30622 1438 aa21.74■■□□□ 1.07
BACE1-201ENST00000313005 ANP32EQ9BTT0 268 aa21.73■■□□□ 1.07
BACE1-201ENST00000313005 ZNF330Q9Y3S2 320 aaPredicted RBP21.71■■□□□ 1.07
BACE1-201ENST00000313005 GOLGA6L6A8MZA4 724 aa21.7■■□□□ 1.06
BACE1-201ENST00000313005 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
BACE1-201ENST00000313005 APBB1O00213 710 aa21.67■■□□□ 1.06
BACE1-201ENST00000313005 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
BACE1-201ENST00000313005 GOLGA6L4A6NEF3 574 aa21.64■■□□□ 1.06
BACE1-201ENST00000313005 PAK3O75914 559 aaPredicted RBP21.64■■□□□ 1.05
BACE1-201ENST00000313005 STK26Q9P289 416 aa21.63■■□□□ 1.05
BACE1-201ENST00000313005 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
BACE1-201ENST00000313005 GNL2Q13823 731 aaKnown RBP21.6■■□□□ 1.05
BACE1-201ENST00000313005 DRC7Q8IY82 874 aa21.59■■□□□ 1.05
BACE1-201ENST00000313005 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
BACE1-201ENST00000313005 CCDC9Q9Y3X0 531 aaKnown RBP21.59■■□□□ 1.05
BACE1-201ENST00000313005 ERICH6BQ5W0A0 696 aa21.58■■□□□ 1.05
BACE1-201ENST00000313005 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
BACE1-201ENST00000313005 CSB-PGBD3P0DP91 1061 aa21.56■■□□□ 1.04
BACE1-201ENST00000313005 DCAF11Q8TEB1 546 aa21.56■■□□□ 1.04
BACE1-201ENST00000313005 RTF1Q92541 710 aaKnown RBP21.56■■□□□ 1.04
BACE1-201ENST00000313005 PRM3Q9NNZ6 103 aa21.55■■□□□ 1.04
BACE1-201ENST00000313005 PNNQ9H307 717 aaKnown RBP21.54■■□□□ 1.04
BACE1-201ENST00000313005 PDE4CQ08493 712 aa21.54■■□□□ 1.04
BACE1-201ENST00000313005 B4GALNT3Q6L9W6 998 aa21.52■■□□□ 1.04
BACE1-201ENST00000313005 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.04
BACE1-201ENST00000313005 HSCBQ8IWL3 235 aa21.52■■□□□ 1.04
BACE1-201ENST00000313005 MORC1Q86VD1 984 aa21.51■■□□□ 1.03
BACE1-201ENST00000313005 CHMP4BQ9H444 224 aaKnown RBP21.5■■□□□ 1.03
BACE1-201ENST00000313005 NRDCO43847 1150 aa21.49■■□□□ 1.03
BACE1-201ENST00000313005 MCCP23508 829 aa21.49■■□□□ 1.03
BACE1-201ENST00000313005 TMF1P82094 1093 aa21.48■■□□□ 1.03
BACE1-201ENST00000313005 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
BACE1-201ENST00000313005 GGT6Q6P531 493 aa21.48■■□□□ 1.03
BACE1-201ENST00000313005 ANO8Q9HCE9 1232 aaPredicted RBP21.48■■□□□ 1.03
BACE1-201ENST00000313005 MS4A1P11836 297 aa21.46■■□□□ 1.03
BACE1-201ENST00000313005 CHMP3Q9Y3E7 222 aa21.46■■□□□ 1.03
BACE1-201ENST00000313005 KANK1Q14678 1352 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms