RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
GPBP1-202ENST00000309096 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
GPBP1-202ENST00000309096 CLCN6P51797 869 aa12.44□□□□□ -0.42
GPBP1-202ENST00000309096 GSE1Q14687 1217 aa12.43□□□□□ -0.42
GPBP1-202ENST00000309096 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
GPBP1-202ENST00000309096 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
GPBP1-202ENST00000309096 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
GPBP1-202ENST00000309096 PKD2Q13563 968 aa12.4□□□□□ -0.42
GPBP1-202ENST00000309096 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
GPBP1-202ENST00000309096 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
GPBP1-202ENST00000309096 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
GPBP1-202ENST00000309096 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
GPBP1-202ENST00000309096 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
GPBP1-202ENST00000309096 PYGBP11216 843 aa12.32□□□□□ -0.44
GPBP1-202ENST00000309096 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
GPBP1-202ENST00000309096 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
GPBP1-202ENST00000309096 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
GPBP1-202ENST00000309096 MAP3K13O43283 966 aa12.29□□□□□ -0.44
GPBP1-202ENST00000309096 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
GPBP1-202ENST00000309096 SGIP1Q9BQI5 828 aa12.25□□□□□ -0.45
GPBP1-202ENST00000309096 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
GPBP1-202ENST00000309096 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
GPBP1-202ENST00000309096 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
GPBP1-202ENST00000309096 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
GPBP1-202ENST00000309096 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
GPBP1-202ENST00000309096 RGL2O15211 777 aa12.18□□□□□ -0.46
GPBP1-202ENST00000309096 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
GPBP1-202ENST00000309096 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
GPBP1-202ENST00000309096 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
GPBP1-202ENST00000309096 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
GPBP1-202ENST00000309096 TIE1P35590 1138 aa12.07□□□□□ -0.48
GPBP1-202ENST00000309096 PDAP1Q13442 181 aaKnown RBP12.06□□□□□ -0.48
GPBP1-202ENST00000309096 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
GPBP1-202ENST00000309096 VGFO15240 615 aaPredicted RBP12.05□□□□□ -0.48
GPBP1-202ENST00000309096 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
GPBP1-202ENST00000309096 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
GPBP1-202ENST00000309096 PSEN1P49768 467 aa12.04□□□□□ -0.48
GPBP1-202ENST00000309096 ASTLQ6HA08 431 aaPredicted RBP12.04□□□□□ -0.48
GPBP1-202ENST00000309096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
GPBP1-202ENST00000309096 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
GPBP1-202ENST00000309096 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
GPBP1-202ENST00000309096 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
GPBP1-202ENST00000309096 ATN1P54259 1190 aaPredicted RBP11.99□□□□□ -0.49
GPBP1-202ENST00000309096 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
GPBP1-202ENST00000309096 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
GPBP1-202ENST00000309096 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
GPBP1-202ENST00000309096 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
GPBP1-202ENST00000309096 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
GPBP1-202ENST00000309096 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
GPBP1-202ENST00000309096 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
GPBP1-202ENST00000309096 STK25O00506 426 aa11.92□□□□□ -0.5
GPBP1-202ENST00000309096 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
GPBP1-202ENST00000309096 C7P10643 843 aa11.91□□□□□ -0.5
GPBP1-202ENST00000309096 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
GPBP1-202ENST00000309096 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
GPBP1-202ENST00000309096 CABP2Q9NPB3 220 aa11.89□□□□□ -0.51
GPBP1-202ENST00000309096 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
GPBP1-202ENST00000309096 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
GPBP1-202ENST00000309096 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
GPBP1-202ENST00000309096 IER5LQ5T953 404 aa11.84□□□□□ -0.51
GPBP1-202ENST00000309096 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
GPBP1-202ENST00000309096 MAMSTRQ6ZN01 415 aa11.81□□□□□ -0.52
GPBP1-202ENST00000309096 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
GPBP1-202ENST00000309096 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
GPBP1-202ENST00000309096 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
GPBP1-202ENST00000309096 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
GPBP1-202ENST00000309096 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
GPBP1-202ENST00000309096 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
GPBP1-202ENST00000309096 COLQQ9Y215 455 aaPredicted RBP11.77□□□□□ -0.53
GPBP1-202ENST00000309096 SOX12O15370 315 aa11.76□□□□□ -0.53
GPBP1-202ENST00000309096 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
GPBP1-202ENST00000309096 MFRPQ9BY79 579 aa11.76□□□□□ -0.53
GPBP1-202ENST00000309096 POTEMA6NI47 508 aa11.75□□□□□ -0.53
GPBP1-202ENST00000309096 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
GPBP1-202ENST00000309096 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
GPBP1-202ENST00000309096 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
GPBP1-202ENST00000309096 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
GPBP1-202ENST00000309096 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
GPBP1-202ENST00000309096 MS4A4AQ96JQ5 239 aa11.72□□□□□ -0.53
GPBP1-202ENST00000309096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.72□□□□□ -0.534e-7■■■□□ 14.9
GPBP1-202ENST00000309096 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
GPBP1-202ENST00000309096 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
GPBP1-202ENST00000309096 SEC24BO95487 1268 aa11.7□□□□□ -0.54
GPBP1-202ENST00000309096 PLCG2P16885 1265 aa11.68□□□□□ -0.54
GPBP1-202ENST00000309096 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.68□□□□□ -0.54
GPBP1-202ENST00000309096 NLRP6P59044 892 aa11.67□□□□□ -0.54
GPBP1-202ENST00000309096 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
GPBP1-202ENST00000309096 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
GPBP1-202ENST00000309096 GTPBP6O43824 516 aaPredicted RBP11.65□□□□□ -0.55
GPBP1-202ENST00000309096 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
GPBP1-202ENST00000309096 PPP1R37O75864 691 aa11.59□□□□□ -0.55
GPBP1-202ENST00000309096 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
GPBP1-202ENST00000309096 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
GPBP1-202ENST00000309096 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
GPBP1-202ENST00000309096 L3MBTL3Q96JM7 780 aaPredicted RBP11.54□□□□□ -0.56
GPBP1-202ENST00000309096 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
GPBP1-202ENST00000309096 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
GPBP1-202ENST00000309096 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
GPBP1-202ENST00000309096 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
GPBP1-202ENST00000309096 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms