RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 SENP3-EIF4A1A0A087X0R7 540 aa24.85■■□□□ 1.57
UBXN2A-201ENST00000309033 EIF5BO60841 1220 aaKnown RBP24.84■■□□□ 1.57
UBXN2A-201ENST00000309033 ARXQ96QS3 562 aa24.84■■□□□ 1.57
UBXN2A-201ENST00000309033 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
UBXN2A-201ENST00000309033 EIF4G2P78344 907 aaKnown RBP eCLIP24.83■■□□□ 1.57
UBXN2A-201ENST00000309033 KCNH8Q96L42 1107 aa24.82■■□□□ 1.56
UBXN2A-201ENST00000309033 GOLGA3Q08378 1498 aa24.79■■□□□ 1.56
UBXN2A-201ENST00000309033 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
UBXN2A-201ENST00000309033 PLEKHG5O94827 1062 aa24.76■■□□□ 1.55
UBXN2A-201ENST00000309033 RGL3Q3MIN7 710 aa24.75■■□□□ 1.55
UBXN2A-201ENST00000309033 ZBTB7CA1YPR0 619 aa24.71■■□□□ 1.55
UBXN2A-201ENST00000309033 RB1CC1Q8TDY2 1594 aa24.68■■□□□ 1.54
UBXN2A-201ENST00000309033 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
UBXN2A-201ENST00000309033 PLEKHD1A6NEE1 506 aa24.65■■□□□ 1.54
UBXN2A-201ENST00000309033 C14orf37Q86TY3 774 aa24.61■■□□□ 1.53
UBXN2A-201ENST00000309033 EEA1Q15075 1411 aa24.61■■□□□ 1.53
UBXN2A-201ENST00000309033 A0A0G2JS52 829 aa24.61■■□□□ 1.53
UBXN2A-201ENST00000309033 PPP1R15AO75807 674 aaPredicted RBP24.61■■□□□ 1.53
UBXN2A-201ENST00000309033 MYH16Q9H6N6 1097 aa24.6■■□□□ 1.53
UBXN2A-201ENST00000309033 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
UBXN2A-201ENST00000309033 CFDP1Q9UEE9 299 aaPredicted RBP24.56■■□□□ 1.52
UBXN2A-201ENST00000309033 SIN3AQ96ST3 1273 aa24.55■■□□□ 1.52
UBXN2A-201ENST00000309033 CARD11Q9BXL7 1154 aa24.51■■□□□ 1.51
UBXN2A-201ENST00000309033 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
UBXN2A-201ENST00000309033 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
UBXN2A-201ENST00000309033 SUPT16HQ9Y5B9 1047 aaKnown RBP24.51■■□□□ 1.51
UBXN2A-201ENST00000309033 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
UBXN2A-201ENST00000309033 PPM1GO15355 546 aaPredicted RBP24.48■■□□□ 1.51
UBXN2A-201ENST00000309033 KNSTRNQ9Y448 316 aa24.47■■□□□ 1.51
UBXN2A-201ENST00000309033 NEUROD2Q15784 382 aa24.44■■□□□ 1.5
UBXN2A-201ENST00000309033 CFAP53Q96M91 514 aa24.41■■□□□ 1.5
UBXN2A-201ENST00000309033 ARID4BQ4LE39 1312 aaPredicted RBP24.39■■□□□ 1.49
UBXN2A-201ENST00000309033 DDRGK1Q96HY6 314 aa24.37■■□□□ 1.49
UBXN2A-201ENST00000309033 BECN1Q14457 450 aa24.37■■□□□ 1.49
UBXN2A-201ENST00000309033 LAS1LQ9Y4W2 734 aaKnown RBP24.36■■□□□ 1.49
UBXN2A-201ENST00000309033 TNNT2P45379 298 aaPredicted RBP24.36■■□□□ 1.49
UBXN2A-201ENST00000309033 CDCA8Q53HL2 280 aa24.35■■□□□ 1.49
UBXN2A-201ENST00000309033 CC2D1BQ5T0F9 858 aaKnown RBP24.35■■□□□ 1.49
UBXN2A-201ENST00000309033 NACADO15069 1562 aa24.33■■□□□ 1.49
UBXN2A-201ENST00000309033 FTSJ3Q8IY81 847 aaKnown RBP24.32■■□□□ 1.48
UBXN2A-201ENST00000309033 TPRNQ4KMQ1 711 aa24.27■■□□□ 1.48
UBXN2A-201ENST00000309033 SOGA1O94964 1423 aa24.26■■□□□ 1.47
UBXN2A-201ENST00000309033 NCLP19338 710 aaKnown RBP24.26■■□□□ 1.47
UBXN2A-201ENST00000309033 FRAT1Q92837 279 aaPredicted RBP24.26■■□□□ 1.47
UBXN2A-201ENST00000309033 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
UBXN2A-201ENST00000309033 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
UBXN2A-201ENST00000309033 MAPK8IP3Q9UPT6 1336 aa24.25■■□□□ 1.47
UBXN2A-201ENST00000309033 POGKQ9P215 609 aa24.24■■□□□ 1.47
UBXN2A-201ENST00000309033 RGS3P49796 1198 aa24.24■■□□□ 1.47
UBXN2A-201ENST00000309033 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
UBXN2A-201ENST00000309033 HAP1P54257 671 aaPredicted RBP24.23■■□□□ 1.47
UBXN2A-201ENST00000309033 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
UBXN2A-201ENST00000309033 DCAF11Q8TEB1 546 aa24.21■■□□□ 1.47
UBXN2A-201ENST00000309033 GLIPR1L2Q4G1C9 344 aa24.19■■□□□ 1.46
UBXN2A-201ENST00000309033 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
UBXN2A-201ENST00000309033 PPP4R2Q9NY27 417 aa24.18■■□□□ 1.46
UBXN2A-201ENST00000309033 GOLGA6L22H0YM25 854 aa24.17■■□□□ 1.46
UBXN2A-201ENST00000309033 LMOD2Q6P5Q4 547 aa24.17■■□□□ 1.46
UBXN2A-201ENST00000309033 TRIM44Q96DX7 344 aaPredicted RBP24.17■■□□□ 1.46
UBXN2A-201ENST00000309033 U2SURPO15042 1029 aaKnown RBP24.16■■□□□ 1.46
UBXN2A-201ENST00000309033 NUDCQ9Y266 331 aa24.16■■□□□ 1.46
UBXN2A-201ENST00000309033 B4GALNT3Q6L9W6 998 aa24.16■■□□□ 1.46
UBXN2A-201ENST00000309033 CUX2O14529 1486 aa24.15■■□□□ 1.46
UBXN2A-201ENST00000309033 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
UBXN2A-201ENST00000309033 CASC1Q6TDU7 716 aa24.14■■□□□ 1.46
UBXN2A-201ENST00000309033 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
UBXN2A-201ENST00000309033 ANP32EQ9BTT0 268 aa24.11■■□□□ 1.45
UBXN2A-201ENST00000309033 FOXD1Q16676 465 aa24.09■■□□□ 1.45
UBXN2A-201ENST00000309033 TMF1P82094 1093 aa24.08■■□□□ 1.45
UBXN2A-201ENST00000309033 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
UBXN2A-201ENST00000309033 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
UBXN2A-201ENST00000309033 SAFB2Q14151 953 aaKnown RBP eCLIP24.05■■□□□ 1.44
UBXN2A-201ENST00000309033 TAOK2Q9UL54 1235 aa24.05■■□□□ 1.44
UBXN2A-201ENST00000309033 HSPA5P11021 654 aaKnown RBP24.05■■□□□ 1.44
UBXN2A-201ENST00000309033 CDK11BP21127 795 aaKnown RBP24.04■■□□□ 1.44
UBXN2A-201ENST00000309033 SOX12O15370 315 aa24.03■■□□□ 1.44
UBXN2A-201ENST00000309033 PTMAP06454 111 aaKnown RBP24.02■■□□□ 1.44
UBXN2A-201ENST00000309033 MLECQ14165 292 aa24.02■■□□□ 1.44
UBXN2A-201ENST00000309033 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
UBXN2A-201ENST00000309033 NOP58Q9Y2X3 529 aaKnown RBP24■■□□□ 1.43
UBXN2A-201ENST00000309033 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
UBXN2A-201ENST00000309033 SRPK2P78362 688 aaKnown RBP23.98■■□□□ 1.43
UBXN2A-201ENST00000309033 KANK1Q14678 1352 aa23.97■■□□□ 1.43
UBXN2A-201ENST00000309033 OS9Q13438 667 aaPredicted RBP23.97■■□□□ 1.43
UBXN2A-201ENST00000309033 ZRSR1Q15695 479 aaKnown RBP23.97■■□□□ 1.43
UBXN2A-201ENST00000309033 PKD2Q13563 968 aa23.96■■□□□ 1.43
UBXN2A-201ENST00000309033 RTN4Q9NQC3 1192 aaKnown RBP23.95■■□□□ 1.42
UBXN2A-201ENST00000309033 VPS8Q8N3P4 1428 aa23.94■■□□□ 1.42
UBXN2A-201ENST00000309033 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
UBXN2A-201ENST00000309033 MORC1Q86VD1 984 aa23.94■■□□□ 1.42
UBXN2A-201ENST00000309033 HSP90AB1P08238 724 aaKnown RBP23.94■■□□□ 1.42
UBXN2A-201ENST00000309033 STK26Q9P289 416 aa23.91■■□□□ 1.42
UBXN2A-201ENST00000309033 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
UBXN2A-201ENST00000309033 DNTTIP2Q5QJE6 756 aaKnown RBP23.9■■□□□ 1.42
UBXN2A-201ENST00000309033 PLCB2Q00722 1185 aa23.89■■□□□ 1.42
UBXN2A-201ENST00000309033 GGT6Q6P531 493 aa23.89■■□□□ 1.42
UBXN2A-201ENST00000309033 TULP1O00294 542 aaPredicted RBP23.89■■□□□ 1.42
UBXN2A-201ENST00000309033 CCER2I3L3R5 266 aa23.89■■□□□ 1.41
UBXN2A-201ENST00000309033 MS4A1P11836 297 aa23.88■■□□□ 1.41
UBXN2A-201ENST00000309033 PNNQ9H307 717 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms