RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 TRIM44Q96DX7 344 aaPredicted RBP27.01■■□□□ 1.91
MTCL1-201ENST00000306329 NCLP19338 710 aaKnown RBP27.01■■□□□ 1.91
MTCL1-201ENST00000306329 MTUS2Q5JR59 1369 aa27■■□□□ 1.91
MTCL1-201ENST00000306329 ZBTB7CA1YPR0 619 aa27■■□□□ 1.91
MTCL1-201ENST00000306329 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
MTCL1-201ENST00000306329 PLEKHG5O94827 1062 aa26.96■■□□□ 1.91
MTCL1-201ENST00000306329 GOLGA6L22H0YM25 854 aa26.93■■□□□ 1.9
MTCL1-201ENST00000306329 RRP7BPQ9NSQ0 103 aa26.91■■□□□ 1.9
MTCL1-201ENST00000306329 C14orf37Q86TY3 774 aa26.9■■□□□ 1.9
MTCL1-201ENST00000306329 SENP3-EIF4A1A0A087X0R7 540 aa26.9■■□□□ 1.9
MTCL1-201ENST00000306329 SCRIBQ14160 1630 aa26.89■■□□□ 1.9
MTCL1-201ENST00000306329 ANP32EQ9BTT0 268 aa26.88■■□□□ 1.89
MTCL1-201ENST00000306329 PTMAP06454 111 aaKnown RBP26.82■■□□□ 1.88
MTCL1-201ENST00000306329 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
MTCL1-201ENST00000306329 TPRNQ4KMQ1 711 aa26.8■■□□□ 1.88
MTCL1-201ENST00000306329 RGL3Q3MIN7 710 aa26.77■■□□□ 1.88
MTCL1-201ENST00000306329 ZRSR1Q15695 479 aaKnown RBP26.77■■□□□ 1.88
MTCL1-201ENST00000306329 CLIP1P30622 1438 aa26.77■■□□□ 1.88
MTCL1-201ENST00000306329 CFAP53Q96M91 514 aa26.76■■□□□ 1.87
MTCL1-201ENST00000306329 SUPT16HQ9Y5B9 1047 aaKnown RBP26.74■■□□□ 1.87
MTCL1-201ENST00000306329 CHMP7Q8WUX9 453 aaPredicted RBP26.73■■□□□ 1.87
MTCL1-201ENST00000306329 DNTTIP2Q5QJE6 756 aaKnown RBP26.72■■□□□ 1.87
MTCL1-201ENST00000306329 CASC1Q6TDU7 716 aa26.72■■□□□ 1.87
MTCL1-201ENST00000306329 FTSJ3Q8IY81 847 aaKnown RBP26.72■■□□□ 1.87
MTCL1-201ENST00000306329 PPM1GO15355 546 aaPredicted RBP26.69■■□□□ 1.86
MTCL1-201ENST00000306329 KNSTRNQ9Y448 316 aa26.69■■□□□ 1.86
MTCL1-201ENST00000306329 TNNT2P45379 298 aaPredicted RBP26.69■■□□□ 1.86
MTCL1-201ENST00000306329 KCNH8Q96L42 1107 aa26.67■■□□□ 1.86
MTCL1-201ENST00000306329 LAS1LQ9Y4W2 734 aaKnown RBP26.65■■□□□ 1.86
MTCL1-201ENST00000306329 NEUROD2Q15784 382 aa26.65■■□□□ 1.86
MTCL1-201ENST00000306329 CDCA8Q53HL2 280 aa26.61■■□□□ 1.85
MTCL1-201ENST00000306329 RGS3P49796 1198 aa26.6■■□□□ 1.85
MTCL1-201ENST00000306329 ERICH6BQ5W0A0 696 aa26.6■■□□□ 1.85
MTCL1-201ENST00000306329 NAP1L5Q96NT1 182 aaPredicted RBP26.59■■□□□ 1.85
MTCL1-201ENST00000306329 CARD11Q9BXL7 1154 aa26.59■■□□□ 1.85
MTCL1-201ENST00000306329 TULP1O00294 542 aaPredicted RBP26.58■■□□□ 1.85
MTCL1-201ENST00000306329 RTN4Q9NQC3 1192 aaKnown RBP26.57■■□□□ 1.84
MTCL1-201ENST00000306329 HAP1P54257 671 aaPredicted RBP26.56■■□□□ 1.84
MTCL1-201ENST00000306329 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
MTCL1-201ENST00000306329 MAPK8IP3Q9UPT6 1336 aa26.56■■□□□ 1.84
MTCL1-201ENST00000306329 PLEKHD1A6NEE1 506 aa26.56■■□□□ 1.84
MTCL1-201ENST00000306329 PLCB2Q00722 1185 aa26.55■■□□□ 1.84
MTCL1-201ENST00000306329 FRAT1Q92837 279 aaPredicted RBP26.54■■□□□ 1.84
MTCL1-201ENST00000306329 PPP4R2Q9NY27 417 aa26.53■■□□□ 1.84
MTCL1-201ENST00000306329 TAOK2Q9UL54 1235 aa26.53■■□□□ 1.84
MTCL1-201ENST00000306329 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
MTCL1-201ENST00000306329 NOP58Q9Y2X3 529 aaKnown RBP26.49■■□□□ 1.83
MTCL1-201ENST00000306329 NUDCQ9Y266 331 aa26.47■■□□□ 1.83
MTCL1-201ENST00000306329 HSP90AB1P08238 724 aaKnown RBP26.47■■□□□ 1.83
MTCL1-201ENST00000306329 CEP162Q5TB80 1403 aa26.45■■□□□ 1.83
MTCL1-201ENST00000306329 CFDP1Q9UEE9 299 aaPredicted RBP26.44■■□□□ 1.82
MTCL1-201ENST00000306329 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
MTCL1-201ENST00000306329 CC2D1BQ5T0F9 858 aaKnown RBP26.41■■□□□ 1.82
MTCL1-201ENST00000306329 ARID4BQ4LE39 1312 aaPredicted RBP26.4■■□□□ 1.82
MTCL1-201ENST00000306329 OS9Q13438 667 aaPredicted RBP26.4■■□□□ 1.82
MTCL1-201ENST00000306329 FGD1P98174 961 aa26.4■■□□□ 1.82
MTCL1-201ENST00000306329 B4GALNT3Q6L9W6 998 aa26.38■■□□□ 1.81
MTCL1-201ENST00000306329 SIN3AQ96ST3 1273 aa26.38■■□□□ 1.81
MTCL1-201ENST00000306329 POGKQ9P215 609 aa26.38■■□□□ 1.81
MTCL1-201ENST00000306329 GOLGA6L6A8MZA4 724 aa26.37■■□□□ 1.81
MTCL1-201ENST00000306329 LMOD2Q6P5Q4 547 aa26.37■■□□□ 1.81
MTCL1-201ENST00000306329 U2SURPO15042 1029 aaKnown RBP26.36■■□□□ 1.81
MTCL1-201ENST00000306329 KCNJ4P48050 445 aa26.35■■□□□ 1.81
MTCL1-201ENST00000306329 CHMP4BQ9H444 224 aaKnown RBP26.35■■□□□ 1.81
MTCL1-201ENST00000306329 NAP1L2Q9ULW6 460 aaPredicted RBP26.35■■□□□ 1.81
MTCL1-201ENST00000306329 MS4A1P11836 297 aa26.32■■□□□ 1.8
MTCL1-201ENST00000306329 NPHP1O15259 732 aa26.28■■□□□ 1.8
MTCL1-201ENST00000306329 EEA1Q15075 1411 aa26.28■■□□□ 1.8
MTCL1-201ENST00000306329 HSCBQ8IWL3 235 aa26.28■■□□□ 1.8
MTCL1-201ENST00000306329 NRDCO43847 1150 aa26.27■■□□□ 1.8
MTCL1-201ENST00000306329 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
MTCL1-201ENST00000306329 GOLGA6L4A6NEF3 574 aa26.26■■□□□ 1.79
MTCL1-201ENST00000306329 SPRYD3Q8NCJ5 442 aa26.21■■□□□ 1.79
MTCL1-201ENST00000306329 PNNQ9H307 717 aaKnown RBP26.2■■□□□ 1.78
MTCL1-201ENST00000306329 CHAF1AQ13111 956 aaPredicted RBP26.19■■□□□ 1.78
MTCL1-201ENST00000306329 GOLGA2Q08379 1002 aa26.18■■□□□ 1.78
MTCL1-201ENST00000306329 TMF1P82094 1093 aa26.17■■□□□ 1.78
MTCL1-201ENST00000306329 MSNP26038 577 aaKnown RBP26.16■■□□□ 1.78
MTCL1-201ENST00000306329 L1TD1Q5T7N2 865 aaKnown RBP26.14■■□□□ 1.78
MTCL1-201ENST00000306329 MCCP23508 829 aa26.13■■□□□ 1.77
MTCL1-201ENST00000306329 DCAF11Q8TEB1 546 aa26.13■■□□□ 1.77
MTCL1-201ENST00000306329 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
MTCL1-201ENST00000306329 DEKP35659 375 aaKnown RBP26.11■■□□□ 1.77
MTCL1-201ENST00000306329 DRC7Q8IY82 874 aa26.11■■□□□ 1.77
MTCL1-201ENST00000306329 SOX12O15370 315 aa26.11■■□□□ 1.77
MTCL1-201ENST00000306329 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
MTCL1-201ENST00000306329 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
MTCL1-201ENST00000306329 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
MTCL1-201ENST00000306329 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
MTCL1-201ENST00000306329 MORC1Q86VD1 984 aa26.06■■□□□ 1.76
MTCL1-201ENST00000306329 SRPK2P78362 688 aaKnown RBP26.04■■□□□ 1.76
MTCL1-201ENST00000306329 CCNB3Q8WWL7 1395 aa26.02■■□□□ 1.76
MTCL1-201ENST00000306329 APBB1O00213 710 aa26.02■■□□□ 1.76
MTCL1-201ENST00000306329 CLSTN1O94985 981 aa26.02■■□□□ 1.76
MTCL1-201ENST00000306329 RBM19Q9Y4C8 960 aaKnown RBP26.01■■□□□ 1.75
MTCL1-201ENST00000306329 SAFB2Q14151 953 aaKnown RBP eCLIP26■■□□□ 1.753e-6■■■□□ 18.3
MTCL1-201ENST00000306329 CCER2I3L3R5 266 aa25.98■■□□□ 1.75
MTCL1-201ENST00000306329 CFAP44Q96MT7 982 aa25.97■■□□□ 1.75
MTCL1-201ENST00000306329 GNL2Q13823 731 aaKnown RBP25.96■■□□□ 1.75
MTCL1-201ENST00000306329 ISY1Q9ULR0 285 aaKnown RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms