RNA–Protein interactions for RNA: ENST00000302558.7

RGPD8-201, Transcript of RANBP2-like and GRIP domain containing 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD8, Length 5,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD8-201ENST00000302558 CLIP1P30622 1438 aa21.24■□□□□ 0.99
RGPD8-201ENST00000302558 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
RGPD8-201ENST00000302558 PLEKHG5O94827 1062 aa21.18■□□□□ 0.98
RGPD8-201ENST00000302558 A0A0G2JS52 829 aa21.18■□□□□ 0.98
RGPD8-201ENST00000302558 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
RGPD8-201ENST00000302558 ZBTB7CA1YPR0 619 aa21.17■□□□□ 0.98
RGPD8-201ENST00000302558 RGL3Q3MIN7 710 aa21.15■□□□□ 0.98
RGPD8-201ENST00000302558 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
RGPD8-201ENST00000302558 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
RGPD8-201ENST00000302558 C14orf37Q86TY3 774 aa21.13■□□□□ 0.97
RGPD8-201ENST00000302558 BECN1Q14457 450 aa21.12■□□□□ 0.97
RGPD8-201ENST00000302558 PPP1R15AO75807 674 aaPredicted RBP21.1■□□□□ 0.97
RGPD8-201ENST00000302558 DDRGK1Q96HY6 314 aa21.1■□□□□ 0.97
RGPD8-201ENST00000302558 PLEKHD1A6NEE1 506 aa21.06■□□□□ 0.96
RGPD8-201ENST00000302558 NCLP19338 710 aaKnown RBP21.04■□□□□ 0.96
RGPD8-201ENST00000302558 SUPT16HQ9Y5B9 1047 aaKnown RBP21.03■□□□□ 0.96
RGPD8-201ENST00000302558 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
RGPD8-201ENST00000302558 CFAP53Q96M91 514 aa21.02■□□□□ 0.96
RGPD8-201ENST00000302558 KNSTRNQ9Y448 316 aa21.02■□□□□ 0.96
RGPD8-201ENST00000302558 TRIM44Q96DX7 344 aaPredicted RBP21.02■□□□□ 0.95
RGPD8-201ENST00000302558 CDK11BP21127 795 aaKnown RBP21.01■□□□□ 0.95
RGPD8-201ENST00000302558 CEP162Q5TB80 1403 aa21■□□□□ 0.95
RGPD8-201ENST00000302558 GOLGA6L22H0YM25 854 aa21■□□□□ 0.95
RGPD8-201ENST00000302558 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
RGPD8-201ENST00000302558 CARD11Q9BXL7 1154 aa20.98■□□□□ 0.95
RGPD8-201ENST00000302558 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
RGPD8-201ENST00000302558 NEUROD2Q15784 382 aa20.96■□□□□ 0.95
RGPD8-201ENST00000302558 CDCA8Q53HL2 280 aa20.96■□□□□ 0.95
RGPD8-201ENST00000302558 ANP32EQ9BTT0 268 aa20.96■□□□□ 0.95
RGPD8-201ENST00000302558 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
RGPD8-201ENST00000302558 FTSJ3Q8IY81 847 aaKnown RBP20.94■□□□□ 0.94
RGPD8-201ENST00000302558 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
RGPD8-201ENST00000302558 EEA1Q15075 1411 aa20.9■□□□□ 0.94
RGPD8-201ENST00000302558 TPRNQ4KMQ1 711 aa20.9■□□□□ 0.94
RGPD8-201ENST00000302558 LAS1LQ9Y4W2 734 aaKnown RBP20.9■□□□□ 0.94
RGPD8-201ENST00000302558 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.93
RGPD8-201ENST00000302558 CASC1Q6TDU7 716 aa20.87■□□□□ 0.93
RGPD8-201ENST00000302558 PTMAP06454 111 aaKnown RBP20.87■□□□□ 0.93
RGPD8-201ENST00000302558 RGS3P49796 1198 aa20.86■□□□□ 0.93
RGPD8-201ENST00000302558 MAPK8IP3Q9UPT6 1336 aa20.86■□□□□ 0.93
RGPD8-201ENST00000302558 HAP1P54257 671 aaPredicted RBP20.85■□□□□ 0.93
RGPD8-201ENST00000302558 ZRSR1Q15695 479 aaKnown RBP20.84■□□□□ 0.93
RGPD8-201ENST00000302558 FRAT1Q92837 279 aaPredicted RBP20.84■□□□□ 0.93
RGPD8-201ENST00000302558 ARID4BQ4LE39 1312 aaPredicted RBP20.84■□□□□ 0.93
RGPD8-201ENST00000302558 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.92
RGPD8-201ENST00000302558 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.92
RGPD8-201ENST00000302558 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
RGPD8-201ENST00000302558 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
RGPD8-201ENST00000302558 CC2D1BQ5T0F9 858 aaKnown RBP20.8■□□□□ 0.92
RGPD8-201ENST00000302558 POGKQ9P215 609 aa20.78■□□□□ 0.92
RGPD8-201ENST00000302558 DNTTIP2Q5QJE6 756 aaKnown RBP20.78■□□□□ 0.92
RGPD8-201ENST00000302558 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
RGPD8-201ENST00000302558 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
RGPD8-201ENST00000302558 LMOD2Q6P5Q4 547 aa20.75■□□□□ 0.91
RGPD8-201ENST00000302558 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
RGPD8-201ENST00000302558 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
RGPD8-201ENST00000302558 ERICH6BQ5W0A0 696 aa20.71■□□□□ 0.91
RGPD8-201ENST00000302558 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
RGPD8-201ENST00000302558 TAOK2Q9UL54 1235 aa20.71■□□□□ 0.91
RGPD8-201ENST00000302558 NOP58Q9Y2X3 529 aaKnown RBP20.71■□□□□ 0.91
RGPD8-201ENST00000302558 PLCB2Q00722 1185 aa20.7■□□□□ 0.9
RGPD8-201ENST00000302558 RTN4Q9NQC3 1192 aaKnown RBP20.68■□□□□ 0.9
RGPD8-201ENST00000302558 HSP90AB1P08238 724 aaKnown RBP20.67■□□□□ 0.9
RGPD8-201ENST00000302558 TULP1O00294 542 aaPredicted RBP20.67■□□□□ 0.9
RGPD8-201ENST00000302558 OS9Q13438 667 aaPredicted RBP20.67■□□□□ 0.9
RGPD8-201ENST00000302558 CHMP4BQ9H444 224 aaKnown RBP20.66■□□□□ 0.9
RGPD8-201ENST00000302558 DCAF11Q8TEB1 546 aa20.66■□□□□ 0.9
RGPD8-201ENST00000302558 MS4A1P11836 297 aa20.65■□□□□ 0.9
RGPD8-201ENST00000302558 NAP1L5Q96NT1 182 aaPredicted RBP20.65■□□□□ 0.9
RGPD8-201ENST00000302558 TMF1P82094 1093 aa20.64■□□□□ 0.89
RGPD8-201ENST00000302558 FGD1P98174 961 aa20.63■□□□□ 0.89
RGPD8-201ENST00000302558 BAZ1BQ9UIG0 1483 aaKnown RBP20.63■□□□□ 0.89
RGPD8-201ENST00000302558 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
RGPD8-201ENST00000302558 KCNJ4P48050 445 aa20.61■□□□□ 0.89
RGPD8-201ENST00000302558 CCNB3Q8WWL7 1395 aa20.61■□□□□ 0.89
RGPD8-201ENST00000302558 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.89
RGPD8-201ENST00000302558 NAP1L2Q9ULW6 460 aaPredicted RBP20.58■□□□□ 0.89
RGPD8-201ENST00000302558 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.88
RGPD8-201ENST00000302558 NPHP1O15259 732 aa20.57■□□□□ 0.88
RGPD8-201ENST00000302558 SOX12O15370 315 aa20.56■□□□□ 0.88
RGPD8-201ENST00000302558 HSCBQ8IWL3 235 aa20.54■□□□□ 0.88
RGPD8-201ENST00000302558 SRPK2P78362 688 aaKnown RBP20.53■□□□□ 0.88
RGPD8-201ENST00000302558 MORC1Q86VD1 984 aa20.53■□□□□ 0.88
RGPD8-201ENST00000302558 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
RGPD8-201ENST00000302558 SPRYD3Q8NCJ5 442 aa20.51■□□□□ 0.87
RGPD8-201ENST00000302558 GOLGA6L6A8MZA4 724 aa20.5■□□□□ 0.87
RGPD8-201ENST00000302558 HSPA5P11021 654 aaKnown RBP20.5■□□□□ 0.87
RGPD8-201ENST00000302558 GOLGA6L4A6NEF3 574 aa20.5■□□□□ 0.87
RGPD8-201ENST00000302558 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
RGPD8-201ENST00000302558 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
RGPD8-201ENST00000302558 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
RGPD8-201ENST00000302558 GOLGA2Q08379 1002 aa20.47■□□□□ 0.87
RGPD8-201ENST00000302558 KANK1Q14678 1352 aa20.47■□□□□ 0.87
RGPD8-201ENST00000302558 MLECQ14165 292 aa20.46■□□□□ 0.87
RGPD8-201ENST00000302558 NRDCO43847 1150 aa20.45■□□□□ 0.86
RGPD8-201ENST00000302558 CARMIL1Q5VZK9 1371 aa20.44■□□□□ 0.86
RGPD8-201ENST00000302558 MCCP23508 829 aa20.43■□□□□ 0.86
RGPD8-201ENST00000302558 FOXD1Q16676 465 aa20.43■□□□□ 0.86
RGPD8-201ENST00000302558 PKD2Q13563 968 aa20.42■□□□□ 0.86
RGPD8-201ENST00000302558 RBM19Q9Y4C8 960 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms